prot_S-ischiensis_contig106.1855.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig106.1855.1
Unique Nameprot_S-ischiensis_contig106.1855.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length142
Homology
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BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 95.1 bits (235), Expect = 5.510e-20
Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 0 
Query:    2 DDMSRMQFPYFIKSKSEATEALQSLIDEQAIPN--GLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAES--------ARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVAF 142
            D  SR     F+K++  A +  Q +  EQ I    G  +  + +D  +E T G+FR    + GI++  +APYS AQNGVAE         ARAML+A  L   LW EA+ +A YL NRTP+RA    +PY   +G++PD+   RD+G+  +
Sbjct:  507 DAKSRFVAVDFMKTRDAALDRFQKV--EQLIERQLGRRVKVLHVDNAKEYTEGKFRAYAESRGIIIRTTAPYSPAQNGVAERLNRTLMERARAMLIARSLPKFLWQEAWAYACYLRNRTPTRALSGKTPYEALWGQKPDVRAARDFGTPCW 655
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BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A2D4PUY1_MICSU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PUY1_MICSU)

HSP 1 Score: 90.9 bits (224), Expect = 4.090e-19
Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 0 
Query:    1 MDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE--------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVA 141
            +D+ SR  + Y +K KSE  +  +         +G++I RI+ D   E    +F+D     GI  + SAPY+ AQNGVAE        + R +L  +KL  K W EA  +A+++ NRT S + ++ +PYF+ YG +PD+S+L+ +GS A
Sbjct:   92 VDNHSRFGYVYLLKEKSETFQIFKDFASLVFNQHGVNIARIQSDRGGEFMSQQFQDWMRKKGIKHQTSAPYTPAQNGVAERRNGVLQSTMRCLLDDAKLDMKYWGEAIMYANHIVNRTWS-SVIDQTPYFMLYGHKPDISHLQTFGSYA 239
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KU88_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU88_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.210e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct:  699 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 847
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5JNR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR9_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.260e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct:  653 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 801
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.280e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct:  890 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 1038
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KBY7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.290e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct:  961 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 1109
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5JSH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH8_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.290e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct:  768 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 916
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.330e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct: 1431 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 1579
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KP38_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP38_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.380e-18
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 
Query:    3 DMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 142
            D +RM+F + IKSK  A EAL++++ E+A P GL I  +  DG  E   GRF  L  +LGI +E +APY    N VAE         + R +L A  L   LW EA+++A Y+ NRTP+      +P  +   K    L ++R++GSV F
Sbjct: 2208 DNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 2356
[Close]
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5I2X6_9HYME (Integrase catalytic domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I2X6_9HYME)

HSP 1 Score: 89.0 bits (219), Expect = 7.550e-18
Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = 0 
Query:    2 DDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNG--------VAESARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVAF 142
            DD S  +  +F+K KS+  +AL+S I       G ++  +R D   E      ++    +G  L  SAPY+  QNG        + ESAR ML++ +L T+LW EA   A Y+ NRT + +    +P+ + +G++PD+S++R +GS  F
Sbjct:  475 DDASNFRKVFFLKHKSDCFDALKSYILSVNTQFGKNVKVLRSDNGTEYLNNNVKEFLKNVGTRLVTSAPYTPQQNGRAEREMRSIVESARTMLLSKRLPTRLWAEAVNTAVYILNRTLNSSNSKQTPFEIWFGRKPDISHVRIFGSECF 623
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q45W64_PHACR5.510e-2038.41Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A2D4PUY1_MICSU4.090e-1936.24Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KU88_9PHAE4.210e-1838.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JNR9_9PHAE4.260e-1838.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KGY1_9PHAE4.280e-1838.67Integrase catalytic domain-containing protein n=7 ... [more]
A0A6H5KBY7_9PHAE4.290e-1838.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JSH8_9PHAE4.290e-1838.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2K1_9PHAE4.330e-1838.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP38_9PHAE4.380e-1838.67Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5I2X6_9HYME7.550e-1833.56Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..137
e-value: 7.5E-17
score: 63.2
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 1..82
e-value: 3.9E-10
score: 40.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..137
score: 8.874
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..134
NoneNo IPR availablePANTHERPTHR11439:SF284coord: 2..134
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig106contigS-ischiensis_contig106:22217..22666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig106.1855.1mRNA_S-ischiensis_contig106.1855.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig106 21951..22666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig106.1855.1 ID=prot_S-ischiensis_contig106.1855.1|Name=mRNA_S-ischiensis_contig106.1855.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=142bp
MDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELT
MGRFRDLCTTLGILLEHSAPYSQAQNGVAESARAMLVASKLSTKLWTEAY
RHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf