prot_S-ischiensis_contig105.1846.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: D8LDJ7_ECTSI (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ7_ECTSI) HSP 1 Score: 470 bits (1210), Expect = 5.480e-165 Identity = 243/315 (77.14%), Postives = 277/315 (87.94%), Query Frame = 0
Query: 4 GGTAASMLVLNDPATQVA--EGTEAPTA-----LASFASANNMVVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSFDGVPIVDSSSLIHDFYTQECDSPVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKLA 311
GG + SMLVLNDPA Q++ EG A +A L++FAS+N++VVK HP+VLFSVLDHY+RRPENQKRVIGTLLGTV+AN VEITNSFAVPHLEKNDEVAVGKDFNK M +LQQRVN RE+VVGWYATSFDGV IVD SSLIHDFYT EC+ PVHLVVDTALK+N+VGCKAFISTPLEI G LANVFHEVKV + S EAERICIDRMVKGQ+ AFT+PEGL+ V+S+M SLE+SMQRL+ M+++A +Y +V +G +PADPHMGRKLADTLA +PRMRPEAFNR+FDDNLQDLLMVSYLSSLTRTQLAIAEKLA
Sbjct: 5 GGGSGSMLVLNDPAAQLSSVEGKAATSAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIDGSALANVFHEVKVSLVSAEAERICIDRMVKGQEEAFTTPEGLAEVDSRMASLETSMQRLVTMLQQAEEYVGTVVDGKLPADPHMGRKLADTLAAIPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLA 319
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A835YQU3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU3_9STRA) HSP 1 Score: 412 bits (1060), Expect = 2.720e-142 Identity = 207/303 (68.32%), Postives = 251/303 (82.84%), Query Frame = 0
Query: 11 LVLNDPATQVAEGTEAPT-ALASFASANNMVVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSFDGVPIVDSSSLIHDFYTQECDSPVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKLAV 312
L+LNDPATQ++ +AP L +AS N++VVK HPVVLFSVLDHY+RRPE Q RVIGTLLG V+AN VE+TNSFAVPH EKNDEVAVGKDFNKQM +L VN +E +VGWYAT+FDG +VD+SSLIH+F+T EC+SPVH+VVDT+L + +GC+A+IS+PLEI G LANVFH+V+V +ES+EAERICIDRMVKGQ +P+G++SV+S+ VSLESSM RLL M+E A + D V G +P D +GRK+ADTLAVVPRMRPEAF ++FD NLQDLLMVSYLSSLTRTQLAIAEKLA+
Sbjct: 10 LILNDPATQLSRTGDAPAPTLTGYASTNDIVVKVHPVVLFSVLDHYLRRPEGQVRVIGTLLGKVNANVVEVTNSFAVPHQEKNDEVAVGKDFNKQMLALSGLVNGQERIVGWYATTFDGAQVVDNSSLIHEFFTTECESPVHIVVDTSLASDTIGCRAYISSPLEIAGEALANVFHQVQVQLESSEAERICIDRMVKGQAGGVLTPDGIASVDSEAVSLESSMTRLLAMLEAASAFVDKVVAGEVPGDAQVGRKIADTLAVVPRMRPEAFAKMFDGNLQDLLMVSYLSSLTRTQLAIAEKLAI 312
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A7S2WB79_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB79_9STRA) HSP 1 Score: 341 bits (874), Expect = 1.300e-113 Identity = 165/271 (60.89%), Postives = 210/271 (77.49%), Query Frame = 0
Query: 40 VVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSFDGVPIVDSSSLIHDFYTQECDSPVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
+VK HP VLFS+LDH+IRR E Q RVIGTLLG V + VE+TN FAVPH +K DEVAVG+ FNK MY L QRVN +E +VGWYATS +GV +VDSSSLIH FY +EC PVHLVVDTA++ + +G KA++STPL + G LAN+FH++KV + S+E ERICIDRM+KGQ + FTS E L+ + ++ + SM+RLL M+E A Y D V G + AD GR++ADTLA VPR+RPE F+R+F+DN+QDLLMVSYL+SLT+TQL I+E+L
Sbjct: 67 LVKVHPAVLFSILDHFIRRQEGQVRVIGTLLGYVEESCVEVTNCFAVPHSDKQDEVAVGQAFNKTMYDLHQRVNPKEQIVGWYATSMEGVSVVDSSSLIHGFYAEECADPVHLVVDTAMRGDTLGVKAYVSTPLTVAGIELANMFHQIKVELFSSEPERICIDRMIKGQKSPFTSSESLAEITEELHGIGVSMERLLGMIEVASSYVDKVIAGEVQADEETGRRIADTLASVPRIRPEVFDRVFNDNIQDLLMVSYLASLTKTQLTISERL 337
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A7S2DND3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND3_9STRA) HSP 1 Score: 339 bits (870), Expect = 1.560e-113 Identity = 171/277 (61.73%), Postives = 213/277 (76.90%), Query Frame = 0
Query: 34 ASANNMVVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSFDGVPIVDSSSLIHDFYTQECDSPVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
A ++ +VK HP VLFS++DH+IRRPE Q RVIGTLLG + VE+ N FAVPH EK DEVAVG+ FNK M SL RVN++E +VGWYATS DG+ IVDSSSLIHDFY EC P+H+VVDTAL N VG KA++STPL+I G AN+FH+V+V + S++AERIC+DRM+KGQ A F + E LS++ ++ SLE+SMQRLL M+E + D V G AD GR +ADTLA VPR+RP+ F+RIF+DNLQDLLMVSYLSSLT++QLAIAE+L
Sbjct: 25 AEGSSRLVKIHPSVLFSIIDHFIRRPEGQTRVIGTLLGYSTDTHVELVNCFAVPHSEKQDEVAVGQTFNKNMCSLHTRVNTKEKIVGWYATSMDGMCIVDSSSLIHDFYANECADPIHIVVDTALIANTVGVKAYVSTPLQIAGVEFANMFHQVQVEMSSSDAERICMDRMLKGQAAPFQTSEALSALPHELTSLETSMQRLLGMIELVSNHVDKVVSGEREADNETGRCIADTLASVPRIRPQVFDRIFNDNLQDLLMVSYLSSLTKSQLAIAERL 301
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: K0TIU7_THAOC (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIU7_THAOC) HSP 1 Score: 298 bits (764), Expect = 2.990e-97 Identity = 161/307 (52.44%), Postives = 213/307 (69.38%), Query Frame = 0
Query: 11 LVLNDPATQVAEGTEAPTALASFASANNMVVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSF------DGVPIVDSSSLIHDFYTQECDS-PVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
L+L PA +A A AS S V HP+VL SVLDH+ RR E RVIGTLLG + +TVEITNSFAVPH E+ DEVA+GKDFN+QM SL R N RE VVGWYAT+ + I D+SSLIH+FY ECD P+HLVVDTALK + + +A+ STP+ I G PLAN+FHE+++ V S+EAERIC+DRM+ D SP+G + + +L SM++LL M+E +Y D V +G +PAD +G +++ L+ +PR+RPEAF+++F+D+LQDLLMV+YLS++T+TQL IAEKL
Sbjct: 15 LILTKPARSLAA---VAAASASSESVPACQVNVHPLVLLSVLDHHTRRQEGAGRVIGTLLGKRNGDTVEITNSFAVPHAERGDEVAIGKDFNRQMLSLHLRANPRETVVGWYATALPDEATGESHCIADTSSLIHEFYAGECDDDPIHLVVDTALKADAIALRAYKSTPVVIKGEPLANMFHEIRLSVRSSEAERICVDRMIGATD----SPDGADPTQDEGEALRVSMEKLLAMLETCSEYVDKVVDGSVPADDALGMDISECLSSIPRIRPEAFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKL 314
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: B8LD20_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD20_THAPS) HSP 1 Score: 288 bits (737), Expect = 1.050e-93 Identity = 146/280 (52.14%), Postives = 201/280 (71.79%), Query Frame = 0
Query: 41 VKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSF---------DGVPIVDSSSLIHDFYTQEC-DSPVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
V HP+VL SVLDH+ RR E RVIGTLLG + VEITN FAVPH E+ DEVA+GKDFN+QM +L R N RE V+GWYAT+ + I D+SSLIH+FY EC D P+HLVVDT+L+ + + +A+ STP+ + G PLAN+FHE+++ V+S+E+ERIC+DRM++ +A EG + + + +L+ SM+RLL M+E +Y D V +G I AD +GR +++TL VPR+RPE F+++F+D+LQDLLMV+YLS++T+TQL IAEKL
Sbjct: 1 VLVHPIVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRETVIGWYATALPDENDPVNGESKCIADTSSLIHEFYATECEDDPIHLVVDTSLETDAMALRAYKSTPVSVKGEPLANLFHEIRLAVKSSESERICVDRMIRSASSA----EGAPASQDESAALQISMERLLAMLETCSEYVDKVVDGTISADDQVGRDISETLNSVPRIRPEVFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKL 276
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A7S1ZLF8_9STRA (Eukaryotic translation initiation factor 3 subunit F n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF8_9STRA) HSP 1 Score: 278 bits (710), Expect = 1.000e-88 Identity = 154/332 (46.39%), Postives = 209/332 (62.95%), Query Frame = 0
Query: 14 NDPATQVAEGTEAPTALASFASANNMVVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSF------------DGVP--------------IVDSSSLIHDFYTQECDS-PVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTS--------PEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
+ PA + +P + A N V HP+VL SVLDH+ RR E RVIGTLLG + VEITN FAVPH E+ DEVA+GKDFN+QM +L R N RE+VVGWYAT+ DG I D+SSLIH+FY ECD P+HLV+DT+L D+ + +A+ STP+++ G PLAN+FHE+++ + + E+IC+D+M+K D PE +S ES + +L+ SM++L M+E A Y DSV +G +P + +GR++AD L+ +PR+RPE F+R+F+D LQDLLMV+YLS LTRTQL IAEKL
Sbjct: 10 SSPALLLQGAASSPADVVDGAGVTNSVT-VHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRESVVGWYATALPEEDEGNEEETKDGGKGKKKMTSSPKSYRCIADTSSLIHEFYAGECDDDPIHLVIDTSLIDDSLALRAYRSTPVQVKGEPLANMFHEIRLGMTCSGTEKICVDKMIKSDDLLKRRNKSQEEEVPEDAASDESPVAALQISMEKLYSMLETATSYVDSVVDGSVPPNDVVGRQIADALSTIPRIRPEVFDRMFNDELQDLLMVTYLSKLTRTQLEIAEKL 340
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A7S3V657_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V657_9STRA) HSP 1 Score: 277 bits (708), Expect = 1.290e-88 Identity = 149/308 (48.38%), Postives = 206/308 (66.88%), Query Frame = 0
Query: 28 TALASFASANNMVVKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSFDGVP---------------IVDSSSLIHDFYTQEC-----DSPVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMV-----SLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
T L + + N +VV HP+VL S+LDH+ RR ++ RVIGTLLG N VE+TN FAVPH E+ DEVA+GKDFN+QM +L R N E VVGWYAT+F + D+SSLIH+FY EC DSPVHLVVDT+L ++ +G K FIS+ + + G PLAN+FHEV+++++S+E+ERI +D M++ EG + + SL+ SM++LL+M+E A Y V +G + AD +G ++ADTL+ VPR+RPE F+++F+D+LQDLLMVSYLS++TRTQL I+EKL
Sbjct: 18 TGLNNTQALNTVVV--HPLVLLSILDHHTRRQDSAGRVIGTLLGRRDGNKVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRSETVVGWYATAFPSNGNDDNDDSNATTETRCLADTSSLIHEFYAGECEDTVMDSPVHLVVDTSLVEDTIGLKGFISSAVTLNGEPLANIFHEVRLLLKSSESERIVLDEMIRSLGGGAKKLEGEEKKDESVGEPSGGSLQVSMEKLLEMLETASDYVGQVVDGKLEADDAVGNQIADTLSTVPRIRPEVFDKMFNDSLQDLLMVSYLSNITRTQLTISEKL 323
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A7R9W361_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W361_9STRA) HSP 1 Score: 275 bits (704), Expect = 4.430e-88 Identity = 150/299 (50.17%), Postives = 194/299 (64.88%), Query Frame = 0
Query: 41 VKCHPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSF----DGVP-----------------IVDSSSLIHDFYTQECDS-PVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQ--------DAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEK 309
V HP+VL SVLDH+ RR E RVIGTLLG + VE+TN FAVPH E+ DEVA+GKDFN+QM +L R N +E VVGWYAT+ DG I D+SSLIH+FY ECD PVHLVVDT+L+ + V +A+ STP+++ G PLAN+FHE+ + V +E+ERI +D+MVK Q + E + +L SM+RLL M+E A Y D V EG PAD +GRK+ D L+ +PR+RPE F+R+F+D+LQDLLMV+YLS++TRTQL IAEK
Sbjct: 29 VVVHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDRVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRKETVVGWYATALPVDSDGGEGEEGADSSGSGGGEYRCIADTSSLIHEFYAGECDDDPVHLVVDTSLRTDAVSLRAYRSTPVQVRGEPLANLFHEIGLAVRCSESERIAVDQMVKAQNREKADGGEXXXXXXXXXXXXEDEAAALRVSMERLLSMLETASAYVDGVVEGKTPADDKVGRKIEDALSAIPRIRPEVFDRMFNDSLQDLLMVTYLSNVTRTQLTIAEK 327
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Match: A0A8J9TEL0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TEL0_PHATR) HSP 1 Score: 261 bits (666), Expect = 5.430e-83 Identity = 137/275 (49.82%), Postives = 188/275 (68.36%), Query Frame = 0
Query: 44 HPVVLFSVLDHYIRRPENQKRVIGTLLGTVSANTVEITNSFAVPHLEKNDEVAVGKDFNKQMYSLQQRVNSRENVVGWYATSFDGVP------IVDSSSLIHDFYTQECDS--PVHLVVDTALKDNVVGCKAFISTPLEIGGFPLANVFHEVKVVVESTEAERICIDRMVKGQDAAFTSPEGLSSVESQMVSLESSMQRLLDMVEEACQYADSVAEGHIPADPHMGRKLADTLAVVPRMRPEAFNRIFDDNLQDLLMVSYLSSLTRTQLAIAEKL 310
HPVVL VLDH+ RR E RVIGTLLG + N VE+TN F+VPH E+ +EVA+GKDFNK M L R N +E VVGWYA++ +G I D+SSLIHDFY E D PVHLVVDT LK++ + +AF S+ + + G + N+FHE+K+ ++S E E IC+++M++ S + +S ++ L+ SM++L ++E+ Y DSV +G P D GR++ADTLA V R+RPE F+R+F D+LQDLLMVSYLS++TRTQ+ IA+KL
Sbjct: 4 HPVVLLHVLDHHTRRQEESGRVIGTLLGRQNGNVVEVTNCFSVPHAERGEEVAIGKDFNKTMLGLHLRANRKETVVGWYASAANGDSESNGDLITDTSSLIHDFYAGEADEGDPVHLVVDTRLKEDSLSMRAFKSSQIVVQGEAMGNLFHELKLSLKSNEPEAICLNQMIRTGGELVASKDESNSAKA----LQISMEKLYALLEKTLAYVDSVVDGKTPPDAEAGRQIADTLATVARVRPEVFDRLFHDSLQDLLMVSYLSNITRTQMTIADKL 274 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig105.1846.1 ID=prot_S-ischiensis_contig105.1846.1|Name=mRNA_S-ischiensis_contig105.1846.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=313bpback to top |