prot_S-ischiensis_contig105.1838.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig105.1838.1
Unique Nameprot_S-ischiensis_contig105.1838.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length55
Homology
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BLAST of mRNA_S-ischiensis_contig105.1838.1 vs. uniprot
Match: D8LR20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR20_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.410e-6
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0 
Query:    1 MADPRADR---PGDMPRLGPTWSRGGGSFMPPKRTVSSENVLEGSKGAG 46
            MAD   +R   P DMPRLGPTWSRGGG F PPKR    E  +EG +G G
Sbjct:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRP---EGHVEGEEGVG 46
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BLAST of mRNA_S-ischiensis_contig105.1838.1 vs. uniprot
Match: A0A6H5KUY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY1_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 1.100e-5
Identity = 28/44 (63.64%), Postives = 29/44 (65.91%), Query Frame = 0 
Query:    1 MADPRADR---PGDMPRLGPTWSRGGGSFMPPKRTVSSENVLEG 41
            MAD   +R   P DMPRLGPTWSRGGG F PPKR    E  LEG
Sbjct:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRP---EGHLEG 41
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR20_ECTSI1.410e-659.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUY1_9PHAE1.100e-563.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig105contigS-ischiensis_contig105:133076..134643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig105.1838.1mRNA_S-ischiensis_contig105.1838.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig105 133076..135069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig105.1838.1 ID=prot_S-ischiensis_contig105.1838.1|Name=mRNA_S-ischiensis_contig105.1838.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=55bp
MADPRADRPGDMPRLGPTWSRGGGSFMPPKRTVSSENVLEGSKGAGMGTG
TALGA
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