prot_S-ischiensis_contig105.1836.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig105.1836.1
Unique Nameprot_S-ischiensis_contig105.1836.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length184
Homology
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BLAST of mRNA_S-ischiensis_contig105.1836.1 vs. uniprot
Match: A0A6H5L9W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9W7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.290e-12
Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 0 
Query:   20 PVAPSLGASGEALDKPAAPKPEPVPLVAAASAVPQNLNQKARKAYEKKLKADQARQAQLAAAQAQQPK-AWGAGAAQQPTGKPNFKDIQAEEGQRKHVHTDAEGPGQAAALEDQRR 134
            P +P +G +GE L+KPAA KP+PVPLVAAASA+P  LNQKARKAYEKKLK + A+              AWG+ A      K +  +IQAEEG+R+        P QA +L ++ R
Sbjct:  265 PPSPLVGPTGEPLEKPAAEKPQPVPLVAAASAIPAGLNQKARKAYEKKLKQEAAKXXXXXXXXXXXXXXAWGSNAVAT-VPKKSLAEIQAEEGKRQAQEAALHTPAQAQSLAEEHR 379
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9W7_9PHAE8.290e-1247.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig105contigS-ischiensis_contig105:119528..120935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig105.1836.1mRNA_S-ischiensis_contig105.1836.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig105 119526..120935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig105.1836.1 ID=prot_S-ischiensis_contig105.1836.1|Name=mRNA_S-ischiensis_contig105.1836.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=184bp
QLLQQQQQQAAAAAAAAAAPVAPSLGASGEALDKPAAPKPEPVPLVAAAS
AVPQNLNQKARKAYEKKLKADQARQAQLAAAQAQQPKAWGAGAAQQPTGK
PNFKDIQAEEGQRKHVHTDAEGPGQAAALEDQRRTMMAAAPPPAPPQASP
QAGRAWGKVKEPVPWGGGGGPPKSLLEIQREEKQ
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