prot_S-ischiensis_contig105.1834.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig105.1834.1
Unique Nameprot_S-ischiensis_contig105.1834.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length271
Homology
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BLAST of mRNA_S-ischiensis_contig105.1834.1 vs. uniprot
Match: A0A6H5L268_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L268_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.380e-5
Identity = 72/214 (33.64%), Postives = 100/214 (46.73%), Query Frame = 0 
Query:    6 SATPYRYDPNDLSMEEDGSSSTSSSAIKALNFAK---------------ASGARTSTSGG---------SGISPADGLYGFMGSMYDIQEQGGGSQGA--GTSSYASSRVQGRMSLSGVSVFSDDDDEEDACDLDLSDIDPTVLARAKLHEEEDEEGKGHRLRLDSGQKLAGGSV-----DGSSCSSKGRKQVSIVTEASPQEEL-GGARREGV 187
            S+ P+RYDPNDLS E+D  S+   SAIK LNF+K               AS A +STSG          SG SP        G+  +++E    SQ A  G    A++  +G  S SGV ++SDDD      DL +SDID  V+ARA     E++  K  R+  +   ++ GG       DG+       ++  +V E     +L  GA RE  
Sbjct:  303 SSAPFRYDPNDLSTEDDTGSA--QSAIKNLNFSKIAKESGGRGGASVDRASRAGSSTSGSGSNTSLTTRSGASPDW----MRGANEEVEEDEKDSQAASSGAKGGATASGEGIESFSGV-IYSDDDS-----DLSVSDIDEGVIARANAFAAEEDARKA-RMEAEEAGRVPGGVARDVVDDGAGAKDGSLREEDVVAEVPEGADLDAGAAREAT 503
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L268_9PHAE1.380e-533.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig105contigS-ischiensis_contig105:105726..108904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig105.1834.1mRNA_S-ischiensis_contig105.1834.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig105 105726..108904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig105.1834.1 ID=prot_S-ischiensis_contig105.1834.1|Name=mRNA_S-ischiensis_contig105.1834.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=271bp
MCTWCSATPYRYDPNDLSMEEDGSSSTSSSAIKALNFAKASGARTSTSGG
SGISPADGLYGFMGSMYDIQEQGGGSQGAGTSSYASSRVQGRMSLSGVSV
FSDDDDEEDACDLDLSDIDPTVLARAKLHEEEDEEGKGHRLRLDSGQKLA
GGSVDGSSCSSKGRKQVSIVTEASPQEELGGARREGVQRRSTPHPVRQAR
RTSKGPSRGEASAASVGQDKTNTVVNSMAPPPPRRVLSPADSTASSGSGG
GRRRKGTPHPGTRKKVAARTK
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