prot_S-ischiensis_contig105.1831.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig105.1831.1
Unique Nameprot_S-ischiensis_contig105.1831.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length457
Homology
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BLAST of mRNA_S-ischiensis_contig105.1831.1 vs. uniprot
Match: A0A6H5KYM4_9PHAE (MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM4_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 4.100e-6
Identity = 32/62 (51.61%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:  385 VATPCSGSKFRSCPQDEDSDYDDYDEYCAVKPTPVRHAGISLCGRPSAQPFLGAASKRLFGD 446
            + TPCSGSKFRS   DE+SDY DY+ YC+VKPTP +     +   PSA       +KRLF D
Sbjct: 1079 MGTPCSGSKFRSADDDEESDYSDYETYCSVKPTPTKR----VLSPPSA-------TKRLFAD 1129
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BLAST of mRNA_S-ischiensis_contig105.1831.1 vs. uniprot
Match: D7G7U2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U2_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 6.030e-6
Identity = 32/62 (51.61%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:  385 VATPCSGSKFRSCPQDEDSDYDDYDEYCAVKPTPVRHAGISLCGRPSAQPFLGAASKRLFGD 446
            + TPCSGSKFRS   DE+SDY DY+ YC+VKPTP +     +   PSA       +KRLF D
Sbjct:  631 MGTPCSGSKFRSADDDEESDYSDYETYCSVKPTPSKR----VLSPPSA-------TKRLFAD 681
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYM4_9PHAE4.100e-651.61MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
D7G7U2_ECTSI6.030e-651.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..456
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig105contigS-ischiensis_contig105:81520..83358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig105.1831.1mRNA_S-ischiensis_contig105.1831.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig105 81435..84376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig105.1831.1 ID=prot_S-ischiensis_contig105.1831.1|Name=mRNA_S-ischiensis_contig105.1831.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=457bp
MRLKLMAGGCWVRTVASSPGPGCVASSANGVLRTSLPGEDAAASTSATPA
PSAATRTSASTPGGGISDKQLPPASPLLLAAASGSEATTEAPPPRAPACI
QCGPSSGPPGSSSATCAHLPAAAESSGAGGEDARRTGWCWCWMSNSTLPW
TGDGGKGARAVPTGAEAEAEDDDDARPMARDLPMAGAVLFETPRLLAASG
NGDGGGGQDTGGSSQEECTPFSISRTRDVPCGGGGGDDGDQGYNGGRQAV
PRGGRLKEHRPGHRGAGHGDGYGGYREVMGPTDPGVRAGDRGGGGGGGGA
GDDALAPSPLVPFAMAGPRLDAVAGGPASPLKQVSLPMQRASPLTPAKRP
LCEAGTQERYPRCRPRGSRGGGGGTPAYGGSPACVATPCSGSKFRSCPQD
EDSDYDDYDEYCAVKPTPVRHAGISLCGRPSAQPFLGAASKRLFGDDPAE
LGHGQA*
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