prot_S-ischiensis_contig102.1741.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig102.1741.1
Unique Nameprot_S-ischiensis_contig102.1741.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length197
Homology
BLAST of mRNA_S-ischiensis_contig102.1741.1 vs. uniprot
Match: D8LFA4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA4_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 3.720e-34
Identity = 75/195 (38.46%), Postives = 116/195 (59.49%), Query Frame = 0
Query:    5 RRGSLRSQSNASDESVAVANLEITGVLTPES--GPALYQTTFSRGGWSWKTTHRYSDWFALKDQLQAEYQTERLPPAGDFPPKGTPLSVLGNVLTSCKP----GERPEG-LDARRKGLEKYFSKLLQEHRDVWEESEAVKLFFSPGPPTAYNRA--RRLSAVQRKDQAQA-EAXXXXXXXSSSTMAKLKGLFEPS 189
            R+GS   + +  +  +  A+LE+     P +  GP +Y   ++RGGW W+T+HRYSDW +LK++LQA++    LP    FP K    +++  VL+SC+     G R  G L+ RR+GL+ YFS++L E R++W+ S  +K FFSPGPPT+Y+ A  RR S   ++++ +A EA       + S  + L  LFE S
Sbjct:   14 RKGSGAKRGSEDEGIIGTASLEVLCAAKPNTNTGPTMYDVAYTRGGWIWRTSHRYSDWLSLKERLQADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGGGRAVGHLEERRRGLQAYFSQVLDEQRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEASSAASMMACSLKSTLGSLFETS 208          
BLAST of mRNA_S-ischiensis_contig102.1741.1 vs. uniprot
Match: A0A6H5KH88_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH88_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.970e-33
Identity = 65/178 (36.52%), Postives = 112/178 (62.92%), Query Frame = 0
Query:    5 RRGSLRSQSNASDESVAVANLEIT---------GVLTPESGPALYQTTFSRGGWSWKTTHRYSDWFALKDQLQAEYQTERLPPAGDFPPKGTPLSVLGNVLTSCKP----GERPEG-LDARRKGLEKYFSKLLQEHRDVWEESEAVKLFFSPGPPTAYNRA--RRLSAVQRKDQAQAE 166
            R+GS   + +  + ++A A+L++           +L   +GP +Y+  ++RGGW W+T+HRYSDW +LK++L+A++    LP    FP K    +++G VL+SC+     G R  G ++ RR+GL+ YFS++L E R++W+ S  ++ FFSPGPPT+Y+ A  RR S   ++++ +A+
Sbjct:   14 RKGSGAKRGSEDEGAIATASLQVLCAAATEPRPNLLATSAGPTMYEAVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAIIGKVLSSCQGCREGGSRAVGHIEERRRGLQAYFSQVLDEQRELWDSSADIEAFFSPGPPTSYSAALSRRRSEQLKEEKLKAK 191          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA4_ECTSI3.720e-3438.46PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KH88_9PHAE1.970e-3336.52PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 8..142
e-value: 3.8E-13
score: 51.2
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 31..144
IPR001683Phox homologous domainPFAMPF00787PXcoord: 39..141
e-value: 1.6E-8
score: 34.5
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..147
score: 9.715

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig102contigS-ischiensis_contig102:94447..99375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig102.1741.1mRNA_S-ischiensis_contig102.1741.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig102 94242..99375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig102.1741.1 ID=prot_S-ischiensis_contig102.1741.1|Name=mRNA_S-ischiensis_contig102.1741.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=197bp
MDYIRRGSLRSQSNASDESVAVANLEITGVLTPESGPALYQTTFSRGGWS
WKTTHRYSDWFALKDQLQAEYQTERLPPAGDFPPKGTPLSVLGNVLTSCK
PGERPEGLDARRKGLEKYFSKLLQEHRDVWEESEAVKLFFSPGPPTAYNR
ARRLSAVQRKDQAQAEAAAAAQEESSSTMAKLKGLFEPSSKKQEGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox