prot_S-ischiensis_contig100.1685.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig100.1685.1
Unique Nameprot_S-ischiensis_contig100.1685.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length172
Homology
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 3.690e-96
Identity = 136/170 (80.00%), Postives = 156/170 (91.76%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAFV 170
            MANTLRPYLN I+GTLDAALC+RNFPSQTVERHNKPEVE RSSKELLLNPVTICRNEQ E+CLIE+SVNSVRVSI VKQAD++E ILC KFT+FLMQR+E F++MRRKP +G+DISFL+TH+HLE +WKHKL+ F+IQFMED+DKEIS MKIAINARGRI+A +FM  FV
Sbjct:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQ-EKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFV 169          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.230e-94
Identity = 136/169 (80.47%), Postives = 155/169 (91.72%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAF 169
            MANTLRPYL TI+ TLDA+LC+RNFPSQTVERHNKPEVEV+SSKELLLNP+TICRNEQ ERCL+ESS+NSVRVSIGVKQAD++E+ILC+KFT FLMQRSE FI+MRRK   GYDISFLITH HLE MWKHKL+ FVI+FMED+DKEIS MKIAINAR RIVA+E+++ F
Sbjct:    1 MANTLRPYLTTIRHTLDASLCLRNFPSQTVERHNKPEVEVQSSKELLLNPITICRNEQ-ERCLVESSINSVRVSIGVKQADEIESILCRKFTRFLMQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQF 168          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 259 bits (661), Expect = 4.060e-86
Identity = 123/169 (72.78%), Postives = 147/169 (86.98%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAF 169
            MANTL PYLN I+ TLD ALC++NFPSQ VERHNKPEVEVR SKEL+L P+ ICRNE  E+C IE S+NS RVSI +KQAD++E+ILC KF+ FLMQR+E FII+RRKP +GYD+SFLITH+HLEN++KHKL+ F+IQFMED+DKEIS MKI +NARGR+VATEFMK F
Sbjct:    1 MANTLAPYLNAIRATLDGALCLQNFPSQVVERHNKPEVEVRMSKELILTPIVICRNEN-EKCCIEPSINSARVSICIKQADEIESILCHKFSRFLMQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.190e-85
Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAFVA 171
            MANTL PYLN I+ TLD ALC++NFPSQ VERHNKPEVEV  S+ELLLNPV ICRNE  ERC IE S+NS RVSI +KQAD++E ILC KF+ FLMQR+E FIIMRRKP +GY ISFLI HTHLEN++KHKL+ F+IQFMED+DKEIS MKI +NARGR+VATEFMK F +
Sbjct:   50 MANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNEN-ERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQFTS 219          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: W4GJL2_9STRA (Actin-related protein 2/3 complex subunit 4 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJL2_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.450e-85
Identity = 124/171 (72.51%), Postives = 145/171 (84.80%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAFVA 171
            MANTL PYLN I+ TLDAALC++NFPSQ VERHNKPE+EV  S+ELLLNPV ICRNE  E+C IE S+NS RVSI +KQAD++E ILC KF+ FLMQR+E FIIMRRK  +GY ISFLI HTHLEN++KHKL+ F+IQFMED+DKEIS MKI +NARGR+VATEFMK F +
Sbjct:    1 MANTLAPYLNAIRSTLDAALCLQNFPSQVVERHNKPEIEVGLSRELLLNPVVICRNEN-EKCCIEPSINSTRVSISIKQADEIETILCHKFSRFLMQRAEQFIIMRRKAIEGYSISFLIIHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQFTS 170          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 256 bits (654), Expect = 4.730e-85
Identity = 125/169 (73.96%), Postives = 146/169 (86.39%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAF 169
            MANTL PYL  I+ +LDAALC+RNFPSQ VERHNKPEVE+R SKELLLNP+ I RNE  E+CLIE S+NS RVSI +KQAD++E ILC KFT FLMQR+E FIIMRR P +GY +SFLITHTHLE+++KHKL+ F+IQFMED+DKEIS MKI++NARGRIVATEFMK F
Sbjct:    1 MANTLAPYLTAIRNSLDAALCLRNFPSQVVERHNKPEVELRLSKELLLNPILIARNEN-EKCLIEPSINSTRVSICIKQADEIETILCHKFTRFLMQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 253 bits (647), Expect = 5.330e-84
Identity = 123/168 (73.21%), Postives = 144/168 (85.71%), Query Frame = 0
Query:    2 ANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAF 169
            ANTL PYL  I+ +LD+ALC+RNFPSQ VERHNKPEVE+R SKELLLNP+ ICRNE  E+CLIE SVNS RVSI +KQAD++E ILC KF  FLMQR++ FIIMRR P +GYD+SFL+ HTHLENM+KHKL+ F+I FMED+DKEIS MKI++NARGRIVATEFMK F
Sbjct:    1 ANTLAPYLTAIRHSLDSALCLRNFPSQVVERHNKPEVELRLSKELLLNPILICRNET-EKCLIEPSVNSTRVSICIKQADEIETILCHKFNRFLMQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A3R6WI01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WI01_9STRA)

HSP 1 Score: 257 bits (656), Expect = 7.240e-84
Identity = 125/170 (73.53%), Postives = 144/170 (84.71%), Query Frame = 0
Query:    2 ANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAFVA 171
            ANTL PYLN I+ TLD ALC++NFPSQ VERHNKPEVEV  S+ELLLNPV ICRNE  ERC IE S+NS RVSI +KQAD++E ILC KF+ FLMQR+E FIIMRRKP +GY ISFLI HTHLEN++KHKL+ F+IQFMED+DKEIS MKI +NARGR+VATEFMK F +
Sbjct:  104 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNEN-ERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQFTS 272          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A7S2BQQ1_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQQ1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 7.720e-84
Identity = 119/169 (70.41%), Postives = 145/169 (85.80%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAF 169
            MA TLRPYLN I+ TLDAALC+RNFPSQ VERHNKPE+E++ +KELLLNP+TICR +  ERCLIE SVNSVR+SI +KQAD++E +LC KFT FLMQR++ FIIMRRK  +GY ISFL+TH HLE MWK+KL+ F+I FMED+D+EISAMK+A+NAR R+VA EF+K F
Sbjct:   11 MAATLRPYLNCIRSTLDAALCLRNFPSQIVERHNKPEIEIKGNKELLLNPITICRTKT-ERCLIEPSVNSVRISIQIKQADEIEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKNKLIDFIISFMEDIDREISAMKLAVNARARVVAKEFLKEF 178          
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 253 bits (646), Expect = 8.090e-84
Identity = 123/171 (71.93%), Postives = 147/171 (85.96%), Query Frame = 0
Query:    1 MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNPVTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSEHFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAMKIAINARGRIVATEFMKAFVA 171
            MA+TL+PYL  ++ TL+A LC+RNFPSQTVERHNKPEVEVR SKELLLNP+TICR ++ ERCLIE SVNSVR+SI +KQAD+LE +LC KFT FLMQR++ FIIMRRK  +GY ISFL+TH HLE MWK KL+ FVIQFMED+DKEISAMK+A+N+R R VA EF++ FVA
Sbjct:    1 MASTLKPYLACVRTTLNAGLCLRNFPSQTVERHNKPEVEVRGSKELLLNPLTICRTDK-ERCLIEPSVNSVRISIQIKQADELEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREFVA 170          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig100.1685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ4_ECTSI3.690e-9680.00Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A836CIE5_9STRA1.230e-9480.47Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A067C4Y9_SAPPC4.060e-8672.78Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
A0A024TP77_9STRA2.190e-8573.68Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
W4GJL2_9STRA3.450e-8572.51Actin-related protein 2/3 complex subunit 4 n=5 Ta... [more]
A0A2D4BNX3_PYTIN4.730e-8573.96Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
K3WN29_GLOUD5.330e-8473.21Actin-related protein 2/3 complex subunit 4 n=27 T... [more]
A0A3R6WI01_9STRA7.240e-8473.53Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2BQQ1_9STRA7.720e-8470.41Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A7S2CG59_9STRA8.090e-8471.93Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 1..167
e-value: 5.1E-77
score: 257.2
IPR008384Actin-related protein 2/3 complex subunit 4PIRSFPIRSF039100ARPC4coord: 1..171
e-value: 9.8E-82
score: 270.6
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 1..170
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 1..169
e-value: 8.7E-80
score: 268.1
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 3..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig100contigS-ischiensis_contig100:297155..302620 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig100.1685.1mRNA_S-ischiensis_contig100.1685.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig100 297096..302831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig100.1685.1 ID=prot_S-ischiensis_contig100.1685.1|Name=mRNA_S-ischiensis_contig100.1685.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=172bp
MANTLRPYLNTIKGTLDAALCIRNFPSQTVERHNKPEVEVRSSKELLLNP
VTICRNEQQERCLIESSVNSVRVSIGVKQADDLEAILCKKFTAFLMQRSE
HFIIMRRKPTQGYDISFLITHTHLENMWKHKLMAFVIQFMEDVDKEISAM
KIAINARGRIVATEFMKAFVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008384ARPC4
IPR034666ARPC2/4