prot_S-ischiensis_contig10.1650.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1650.1
Unique Nameprot_S-ischiensis_contig10.1650.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length406
Homology
BLAST of mRNA_S-ischiensis_contig10.1650.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 5.870e-47
Identity = 156/280 (55.71%), Postives = 195/280 (69.64%), Query Frame = 0
Query:    1 MTEYKRTLKELDDIVEQLGALGDGGAMGAEEKMEVLENIKGRLEGAIATSVGRFDKRLGETDPVSGQPRYGDAMRKKVMDLKAKYQGLGEQVVPLEEKIREELAGHRGQQAKDAEAASQAQRAERDARETRLRVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRQSVVVGAAGAEAGLRSVGEACGADVKRRKATVLALQQMVNNVAASPEDPRFRRIRLDNENFQRAVGHLEGAVQVLLAAGFRMQ 280
            MTE+KRT ++L  + E LG+LG   +  A EK+      KGRLE  ++  V +F++RL ETDPVSG PRYG++M  KV+ L AK+Q L E++  LE +I   ++ H  ++A  AE A + +   +           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EL  SV VGAAG E GLR + +ACG     +KA V ALQQ++ NVA++PEDPRFRRI+ DNENFQRA+G  EG +Q+LL++GFRMQ
Sbjct:    1 MTEFKRTAEDLASLEELLGSLGSDSSTPAPEKLATFSTAKGRLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQ 280          
BLAST of mRNA_S-ischiensis_contig10.1650.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.230e-27
Identity = 122/282 (43.26%), Postives = 157/282 (55.67%), Query Frame = 0
Query:    1 MTEYKRTLKELDDIVEQLGALGDGGAMGAEEKMEVLENIKGRLEGAIATSVGRFDKRLGETDPVSGQPRYGDAMRKKVMDLKAKYQGLGEQVVPLEEKIREELAGHRGQQAKDAEAASQAQRAERDARETRLRVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRQSVVVGAAGAEAGLRSVGEACGA---DVKRRKATVLALQQMVNNVAASPEDPRFRRIRLDNENFQRAVGHLEGAVQVLLAAGFRM 279
            MTE+KR   E+D++  +L AL    +  A +  +VL+ IK  +EG +   + +F+KRL ETDP+SGQ RYG+ MR KV  L+ +Y  L  ++   E K+   LA H                              XXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXX           +  SV VGAAG EAGLR++ +ACG      + RK T  AL Q++ N+ +SPEDPRFRRIR +NE F   VG  EGAVQVLL++GF++
Sbjct:    1 MTEFKRVQAEVDELGARLAALEADCSDAAPDTAKVLQEIKATVEGELQGKMAKFEKRLTETDPISGQLRYGEGMRAKVAQLQQQYDALAAELRLAEGKLAAALAAHANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLAREAAVLRDKKKADXXXXXXXXXXARLAREREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQMRK-TCGALLQILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKV 281          
BLAST of mRNA_S-ischiensis_contig10.1650.1 vs. uniprot
Match: A0A7S3YFN4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFN4_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 2.330e-7
Identity = 103/266 (38.72%), Postives = 146/266 (54.89%), Query Frame = 0
Query:    1 MTEYKRTLKELDDIVEQLGALGDGGAMGAEEKMEV--LENIKGRLEGAIATSVGRFDKRLGETDPVSGQPRYGDAMRKKVMDLKAKYQGLGEQVVPLEEKIREELAGHRGQQAKDAEAASQAQRAERDARETRLRVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRQSVVVGAAGAEAGLRSVGEACGADVKRRKATVL-ALQQMVNNVAASPEDPRFRRIRLDNENFQRAVG 263
            M E++R  ++++ I  +L A+ +G +   E+  E   +E I    E + A    RF++RL ETDP++G PRYG +M+ KV ++ ++ +G+ EQ    ++        ++ +QA   +AA QA + + +A +   +  A                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LR SV  G AG    L  +G A GA+        L  L  ++  V A PED + RR+ LDN  F+ AVG
Sbjct:    1 MAEFRRITEQIESIELKLKAIVEGNSSIVEKWNECTDIETILKETEESRA----RFNRRLKETDPITGDPRYGPSMKAKVENMLSRARGVHEQFEVQKQTAEAAYESYQQEQAAAKDAAEQAFQGQNEAHQ---KADADLEEKNRLEEARAAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEARLAALR-SVPRGGAGLGLALDRLGAAAGAEGPAAHRLALETLAGLLAAVVARPEDAQLRRVNLDNPRFRAAVG 258          
BLAST of mRNA_S-ischiensis_contig10.1650.1 vs. uniprot
Match: A0A7S4J576_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J576_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.680e-5
Identity = 113/265 (42.64%), Postives = 150/265 (56.60%), Query Frame = 0
Query:   27 MGAEEKMEVLENIKGRLEGAIATSVGRFDKRLGETDPVSGQPRYGDAMRKKVMDLKAKYQGLGEQVVPL--EEKIREELAGH---------RGQQAKDAEAASQAQRAERDARETRLRVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRQSVVVGAAGAEAGLRSVGEACGADVKRRKATVLALQQMVNNVAASPEDPRFRRIRLDNENFQRAVGHLEGAVQVLLAAGFRMQ 280
            MG +E +  LE+I+ RLE  +     RF +RL ETDPV+  PRYG+    +V  +   +  L   +  +  EE+  +  AG          R    K+ EAA   +  +R+A   +        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        S+  G  G    L  + +   +D K     + AL  + + +AA PE+ +FRRIR D+  F+  VG   G  +V +AAGF+++
Sbjct:   71 MGVKEALVELESIRHRLE-VLREKTVRFRQRLAETDPVTNAPRYGERTMLRVRTMLGLFDDLSSAICVIFGEEESADPPAGKGHDCIVGKMRFFDRKEEEAA---ENLKREAEAAQANESLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADRAFMASIKKGPDGVRDQLFMLRDGTASDPKAYSTAIGALHTIFSQIAAHPEEIKFRRIRRDHPKFEEDVGRHSGGREVFVAAGFKLE 331          
BLAST of mRNA_S-ischiensis_contig10.1650.1 vs. uniprot
Match: A0A7S3HTB3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTB3_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.810e-5
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 0
Query:  223 KRRKATVLALQQMVNNVAASPEDPRFRRIRLDNENFQRAVGHLEGAVQVLLAAGF 277
            +R K  V  + +M+ N+AA+PEDP+ R IR+ N+ FQ  V  + G  ++L+AAG+
Sbjct:    4 ERGKVAVSTVSRMIQNLAAAPEDPKLRSIRVSNKAFQSKVAAVPGGAELLVAAGY 58          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FV16_ECTSI5.870e-4755.71PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YSV6_9STRA2.230e-2743.26PUB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3YFN4_HETAK2.330e-738.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4J576_9STRA6.680e-542.64Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3HTB3_9STRA6.810e-541.82Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..195
NoneNo IPR availableGENE3D1.20.58.2190coord: 198..291
e-value: 1.2E-14
score: 55.7
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 104..284
IPR018997PUB domainPFAMPF09409PUBcoord: 229..280
e-value: 1.1E-12
score: 47.7
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 218..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3458451..3465295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1650.1mRNA_S-ischiensis_contig10.1650.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 3458393..3465518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1650.1 ID=prot_S-ischiensis_contig10.1650.1|Name=mRNA_S-ischiensis_contig10.1650.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=406bp
MTEYKRTLKELDDIVEQLGALGDGGAMGAEEKMEVLENIKGRLEGAIATS
VGRFDKRLGETDPVSGQPRYGDAMRKKVMDLKAKYQGLGEQVVPLEEKIR
EELAGHRGQQAKDAEAASQAQRAERDARETRLRVQAELEEQGRQEAAARE
KALEEERARVAEEANRSRLARQRLREEEEALRQEQRARHQREAEELRQSV
VVGAAGAEAGLRSVGEACGADVKRRKATVLALQQMVNNVAASPEDPRFRR
IRLDNENFQRAVGHLEGAVQVLLAAGFRMQAGGRGGESPAHAGARHQGGR
GCLEPVVRQPQACGKEARSGARRALRTPGRSGPVASPQPLGWRRVPAGAL
TRPGATLRWQGHGGLGWARLASGGSSRSLPVVSGVGGPTCVPVVVPPLSS
RLWSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf