prot_S-ischiensis_contig10.1640.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1640.1
Unique Nameprot_S-ischiensis_contig10.1640.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length482
Homology
BLAST of mRNA_S-ischiensis_contig10.1640.1 vs. uniprot
Match: D8LLZ9_ECTSI (Ankyrin repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ9_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 5.630e-34
Identity = 125/324 (38.58%), Postives = 155/324 (47.84%), Query Frame = 0
Query:  189 SASKGQTILMQAAKHNRPRCVAVLATTPGCRVNTGTLAGSGXXXXXXXXYTALHYACYNGGAAAALELLVHGADARLRNQHGETALQSAQTGGQEACAEAVRDFLRKPQFAG--------GVADAAGTAPAG----------------------------------------------------GHGAAG-PPEVARANTIYCLGRKRRRI--GNPIRASGRGLXXXXXXXXAEAALGARRGVKLHATNPYVGTAMEAYVYQSVAWGRDPFSSEGG--------------VGVPRAVESDVWTKYYVGAYEAGIREWYSQAQHQ 435
            S+ +G+T LM+AA+ ++  C +VLA    C    G  AG+          +ALHYAC+ G   +  ELLV GAD RLRN+ GETALQ+A   GQ  CA+ VRDFLR+P F            A  AG AP                                                      G G AG  PEV RAN ++CLGR+RRR+  G  +R  GRGLXXXXX   AE  LGARRG +LHATNP  GTAMEA+V  S+A G+DPF SE G               G  R   +DVW ++Y     A +  W+   Q Q
Sbjct:  157 SSIRGRTPLMEAARQDQTGCCSVLAEA-ACAQGAGLNAGN----ETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNRDGETALQAALANGQAECADLVRDFLRRPTFEPEPQSGDLFATATTAGVAPPADPALPRRHGKSGSPQEAEKARAAXXXXXXXXXXXXXXXXXXXXXXXKRNNTIGEGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRP-GRGLXXXXXTAAAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFRSEAGGEEGAEDEFGQGRGKGEDRGA-ADVWLEHY-----ASLSAWHDHQQRQ 468          
BLAST of mRNA_S-ischiensis_contig10.1640.1 vs. uniprot
Match: A0A6H5JPI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI7_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 8.060e-34
Identity = 128/322 (39.75%), Postives = 158/322 (49.07%), Query Frame = 0
Query:  189 SASKGQTILMQAAKHNRPRCVAVLATTPGCRVNTGTLAGSGXXXXXXXXYTALHYACYNGGAAAALELLVHGADARLRNQHGETALQSAQTGGQEACAEAVRDFLRKPQF--------------AGGVADAAGTAPAGGHGAAGPP----------------------------------------------EVARANTIYCLGRKRRRI--GNPIRASGRGLXXXXXXXXAEAALGARRGVKLHATNPYVGTAMEAYVYQSVAWGRDPFSSEGG--------VGVPRAVE-----SDVWTKYYVGAYEAGIREWYSQAQHQ 435
            S+ +G+T LM+AA+ ++  C +VLA    C    G  AG+          +ALHYAC+ G   +  ELLV GAD RLRN  GETALQ+A   GQ  CA+ VRDFLR+P F                GVA  A  A    HG +G P                                              EV RAN ++CLGR+RRR+  G  +R  GRGLXXXXXXXXAE  LGARRG +LHATNP  GTAMEA+V  S+A G+DPF SE G         G  R  E     +DVW ++Y     A +  W+   Q Q
Sbjct:  156 SSIRGRTPLMEAARMDQTGCCSVLAEA-ACAQGAGLNAGN----ETQGRNSALHYACHEGSGGSVCELLVRGADPRLRNSDGETALQAALANGQAECADLVRDFLRRPTFEPDPQSGDLFTTATVAGVAPPADPAFPRRHGTSGSPLVAEKAGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXIGGGVAGVAPEVRRANAVFCLGRRRRRLCRGFGVRP-GRGLXXXXXXXXAEIGLGARRGARLHATNPCPGTAMEAFVLWSIADGQDPFRSEAGGDEGAEDEFGEARGKEEDRGAADVWLEHY-----ASLSLWHDLQQRQ 466          
BLAST of mRNA_S-ischiensis_contig10.1640.1 vs. uniprot
Match: A0A836CFP6_9STRA (FHA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.960e-7
Identity = 83/229 (36.24%), Postives = 99/229 (43.23%), Query Frame = 0
Query:  194 QTILMQAAKHNRPRCVAVLATTPGCRVNTGTLAGSGXXXXXXXXYTALHYACYNGGAAAALELLVHGADARLRNQHGETALQSAQTGGQEACAEAVRDFLRKPQFAGGVADAAGTAPAGGHGAAGPPEVARANTIYCLGRKRRRIGNPIRASGRGLXXXXXXXXA----EAALGARRGV-----KLHATNPYVGTAMEAYVYQSVAWGRDPFSSEGGVGVPRAVESDVW 413
            +T+LM+AA  +R RC   L    GCRVN  + A +G          ALH A  +G  AAAL LL+H ADA LRN   E A Q A      A    +  F R P  A                     +V   NT Y   R                XXXXXXXX       AL A  GV        A +P+ GTAM  Y+ Q++A GRDPF +EGG G   A E D W
Sbjct:   79 RTLLMEAAALDRARCAETLLREFGCRVNAQS-AETGD--------AALHCAARHGARAAALALLMHAADASLRNNADECA-QRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXX--------XCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGG-GAEEA-ERDRW 287          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLZ9_ECTSI5.630e-3438.58Ankyrin repeat-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JPI7_9PHAE8.060e-3439.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFP6_9STRA3.960e-736.24FHA domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 236..265
e-value: 0.22
score: 20.6
coord: 192..222
e-value: 310.0
score: 8.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 236..268
score: 10.526
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 137..299
e-value: 4.7E-17
score: 64.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 188..288
NoneNo IPR availablePFAMPF13857Ank_5coord: 235..275
e-value: 8.3E-9
score: 35.6
NoneNo IPR availablePANTHERPTHR24203:SF45ANKYRIN REPEAT AND SOCS BOX PROTEIN 3coord: 171..288
coord: 192..288
NoneNo IPR availablePANTHERPTHR24203FAMILY NOT NAMEDcoord: 171..288
coord: 192..288
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 192..295
score: 13.681

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3351118..3357736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1640.1mRNA_S-ischiensis_contig10.1640.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 3351117..3357736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1640.1 ID=prot_S-ischiensis_contig10.1640.1|Name=mRNA_S-ischiensis_contig10.1640.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=482bp
PGGTPAQYPRIPKPGTACCDAARAPTSVSVGDDPIFHGHSFFVTSQGRRP
PNCNGTRLRSILFAHATGGGGHLGAQEMAARRSIEQEWSAKGVAMSWAEA
VLVEAHTAELQANQEAAPALAGSVPPGAAAAMAAVEAAGHHRRASEHQMN
TTILDAVGAGDDVRTLESVLAAASESVHIPGCVNSNPASASKGQTILMQA
AKHNRPRCVAVLATTPGCRVNTGTLAGSGGGGGGGGGYTALHYACYNGGA
AAALELLVHGADARLRNQHGETALQSAQTGGQEACAEAVRDFLRKPQFAG
GVADAAGTAPAGGHGAAGPPEVARANTIYCLGRKRRRIGNPIRASGRGLG
VGVGVAAAEAALGARRGVKLHATNPYVGTAMEAYVYQSVAWGRDPFSSEG
GVGVPRAVESDVWTKYYVGAYEAGIREWYSQAQHQHNSQQQQQPRSPSHP
YSREDQEGGRPLRAHPRGARQGRNSPGHSGPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom