prot_S-ischiensis_contig10.1385.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1385.1
Unique Nameprot_S-ischiensis_contig10.1385.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length155
Homology
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BLAST of mRNA_S-ischiensis_contig10.1385.1 vs. uniprot
Match: A0A6H5JHV6_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.550e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:   51 LLRLHIISARGLPRSVGAVGL------PDASVVVKFNGAKVGETQVEHGTRRPVWNEAFVIRSYL 109
            LLR+H++SARGLPRS GAVGL      PD  VVVKFNG KVG T+ + GTRRP WN+ F+IRS L
Sbjct:   25 LLRIHVVSARGLPRSAGAVGLARARGMPDPYVVVKFNGEKVGCTKADRGTRRPEWNQNFLIRSDL 89
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHV6_9PHAE2.550e-1664.62C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 27..112
e-value: 1.5E-11
score: 46.2
IPR000008C2 domainPFAMPF00168C2coord: 51..105
e-value: 1.5E-8
score: 34.9
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 47..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:1371591..1372173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1385.1mRNA_S-ischiensis_contig10.1385.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 1371591..1372175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1385.1 ID=prot_S-ischiensis_contig10.1385.1|Name=mRNA_S-ischiensis_contig10.1385.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=155bp
ELCTAVARRQVVVQDGLPRSCGLTLMDENMSTPRAAAPAADRNGKTPQAN
LLRLHIISARGLPRSVGAVGLPDASVVVKFNGAKVGETQVEHGTRRPVWN
EAFVIRSYLGDDGPRDGGCDSAKSSPGPGSPADYHRNHRSLSEGGVHRQY
AGGFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom