prot_S-ischiensis_contig1.165.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.165.1
Unique Nameprot_S-ischiensis_contig1.165.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length228
Homology
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: A0A6H5KKT3_9PHAE (U1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKT3_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 2.790e-82
Identity = 158/227 (69.60%), Postives = 187/227 (82.38%), Query Frame = 0
Query:    1 MSKDLGYKQTQDVH-RRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAA--QFEDPDIAAMMGFGGFG 224
            MSKDLGYKQ ++V  RRTWDRDYYEA+AKERIE+GDD+ E +  AP  RS+KEEF+ A  GAAGPAGS RA+L+ R+ KVDL S+LGKTQVV++A+ PS QGGW+CE CKC LKDS+NYLDHINGKKHQR LG+SMRVERSTVSQVK+R K HKQ EED+  G   KPSA ++++ R RE  + E XXXXXXXXXXXXXXXXXXXX    +F+DP++AAMMGFGGFG
Sbjct:    1 MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGAPARRSQKEEFQPAAPGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFG 227          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: A0A835ZCC8_9STRA (U1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC8_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.770e-58
Identity = 137/224 (61.16%), Postives = 162/224 (72.32%), Query Frame = 0
Query:    2 SKDLGYKQTQDVHRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGN-AGKPSALEDYEARTRE-RAEEEAXXXXXXXXXXXXXXXXXXXXAAQFEDPDIAAMMGFGGF 223
            S DLG KQ  +V RR+WD + YE +AKER+E+GD+  EA P +      KEEF+ A  GA GPAGS+RA+L+ R  KVDLESRL KTQV++SAAA S+QGG+WCE CKCLLKDS+ YLDHINGKKHQRALGFSMRVERS+V  VK +  K +   ED  K + A + SA+++YE R  E  A    XXXXXXXXXXXXXXXXXXXX         AAMMGFGGF
Sbjct:    7 SDDLGDKQVSNVVRRSWDVELYEKKAKERLERGDEVEEARPASSKAALNKEEFQPAPDGAQGPAGSRRAYLKARTEKVDLESRLHKTQVITSAAASSSQGGYWCEVCKCLLKDSIAYLDHINGKKHQRALGFSMRVERSSVGSVKEKLDKLRARAEDAAKASGAPRKSAVQEYEERLAEYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMMGFGGF 230          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: A0A7S2WR40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WR40_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.790e-48
Identity = 119/212 (56.13%), Postives = 143/212 (67.45%), Query Frame = 0
Query:   13 VHRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAAQFEDPDIAAMMGFGGFG 224
              RRTWD   YE +A+ER+ + +  +        P   ++EF+ AE  AAGPAGS RAFL NR   + LE   GKTQ+++        GGW+C+ C+CLLKDS NYLDHINGKKHQR LGFSMRVERSTV QV  RFK  K+ +ED+    A +P+A+E YE R     EEE XXXXXXXXXXXXXXXXXXXX  +  DPD+ A MGFGGFG
Sbjct:   11 AQRRTWDVKEYEKKAQERLAREEGGIVEGDVDDRPVRDRDEFRRAEDQAAGPAGSARAFLNNRNRALGLEKAAGKTQIIADNGLRQKGGGWYCDVCECLLKDSSNYLDHINGKKHQRKLGFSMRVERSTVGQVSERFKLAKKRKEDEMSV-ATRPTAIEAYEQRIAAAQEEEXXXXXXXXXXXXXXXXXXXXXXMEGMDPDLMAAMGFGGFG 221          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: W7U2Z2_9STRA (Zinc finger matrin-type protein 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2Z2_9STRA)

HSP 1 Score: 166 bits (420), Expect = 9.050e-48
Identity = 99/220 (45.00%), Postives = 141/220 (64.09%), Query Frame = 0
Query:   13 VHRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAAQFE---------DPDIAAMMGFGGF 223
            V RRTWD +++E  AKER+EK +   + E + PG   K+EEF++AE GAAGP GS+RA+L++R+  + LE ++GK QVV+ ++AP  QGG+WC+ C+CLLKDS+ YLDHINGKKHQ+ALG+SMRVER  V +VK R    K+ E++KKK    + SA++ Y+ +  +   +EA                      + E         DP++AA+MGFGGF
Sbjct:   18 VERRTWDLEHFEKIAKERLEK-EASGDVEKKKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGP-RESAIDAYQKKLEK---DEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGF 232          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: A0A4D9DA28_9STRA (U1-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA28_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.240e-41
Identity = 86/162 (53.09%), Postives = 121/162 (74.69%), Query Frame = 0
Query:   13 VHRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYE 174
            V RRTWD +++E  AKER+EK +   + E + PG   K+EEF++AE GAAGP GS+RA+L++R+  + LE ++GK QVV+ ++AP  QGG+WC+ C+CLLKDS+ YLDHINGKKHQ+ALG+SMRVER  V +VK R    K+ E++K+K    + SA++ YE
Sbjct:   18 VERRTWDLEHFEKIAKERLEK-EASGDVEKKKPGFVRKREEFQAAETGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKRKAGP-RESAIDAYE 177          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: UPI000719CFDE (zinc finger matrin-type protein 2-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CFDE)

HSP 1 Score: 145 bits (365), Expect = 6.120e-40
Identity = 105/214 (49.07%), Postives = 135/214 (63.08%), Query Frame = 0
Query:   14 HRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAAQFEDPDIAAMMGFGGFGPKK 227
            HR+ WD+D+YE+ AKERIE      E +  A G +SK+   K             R  L+ R  KVDLES+LGK+QV++     + QGG++C  C C++KDS+N+LDHINGKKHQR LG SM+VERST+ QVK RF+ +K+  E+KKK          D+E R +E  EE  XXXXXXXXXXXXXX        Q  DPD+A++MGF GFG  K
Sbjct:   11 HRKKWDKDHYESLAKERIE------EEQRMALGIQSKEMPVK-------------RELLKQRDYKVDLESKLGKSQVITKTTPAACQGGYYCNVCDCIVKDSINFLDHINGKKHQRNLGMSMKVERSTLDQVKKRFELNKKKMEEKKKDY--------DFEQRIQELREEXXXXXXXXXXXXXXXXRKADDSIEQSLDPDMASLMGFSGFGTTK 197          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: A0A7M7NK23_STRPU (Matrin-type domain-containing protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NK23_STRPU)

HSP 1 Score: 144 bits (362), Expect = 2.300e-39
Identity = 92/214 (42.99%), Postives = 121/214 (56.54%), Query Frame = 0
Query:   14 HRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAAQFEDPDIAAMMGFGGFGPKK 227
            HRR WDRD YE  AKER+++     E E +A   R +KE           P   +R  L+ R  KVDL+S+LGK+QV++     S  GG++C+ C C++KDS+N+LDHINGKKHQR LG SM VERS++ QVK RF+ +K+  E+KKK          D+EAR +E  EEE                          DPD+A+MMGF GFG  K
Sbjct:   17 HRRKWDRDEYEKLAKERLDQ-----ELEAQAEKERRRKEP----------PV--KRELLKQRDYKVDLDSKLGKSQVITKTTPSSQMGGYYCDVCDCVVKDSINFLDHINGKKHQRNLGMSMNVERSSLDQVKKRFEMNKKKVEEKKKDY--------DFEARLQELKEEEEKHKAYQREKRKDRKRRADDGVIDRIDPDMASMMGFAGFGSIK 205          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: A0A8B7XWW6_ACAPL (zinc finger matrin-type protein 2-like n=3 Tax=Valvatida TaxID=41166 RepID=A0A8B7XWW6_ACAPL)

HSP 1 Score: 143 bits (361), Expect = 3.160e-39
Identity = 108/215 (50.23%), Postives = 138/215 (64.19%), Query Frame = 0
Query:   14 HRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAAQFE-DPDIAAMMGFGGFGPKK 227
            HRR WDRD +E  AKER++  +D  ++   A   +S++   K             R  L+ R  KVDLESRLGK+QV++     S  GG++C  C C++KDS+N+LDHINGKKHQR LG SM+VERST+ QVK RF+ +K+ +E+KKK          D+E+R +E  EEEAXXXXXXXXXXXXXXXX          DPD+AAMMGF GFG  K
Sbjct:   15 HRRKWDRDEFEKLAKERLQAEEDESDS---ATDKKSRQPPVK-------------RELLKQRDYKVDLESRLGKSQVITKTTPSSQMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSTLDQVKRRFELNKRKKEEKKKDY--------DFESRMQELREEEAXXXXXXXXXXXXXXXXAEDDDLDSGLDPDMAAMMGFSGFGSTK 205          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: UPI0002658601 (zinc finger matrin-type protein 2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658601)

HSP 1 Score: 141 bits (356), Expect = 1.990e-38
Identity = 112/220 (50.91%), Postives = 139/220 (63.18%), Query Frame = 0
Query:   14 HRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGS-----QRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAA-QFEDPDIAAMMGFGGFGPKK 227
            HRR WDRD YE RAKER E GD+           RS  ++ +     + GP+ S     QR  L+ R+ KVDL+SRLGKT V+S  A  S  GG++C  C C++KDS+N+LDHINGKKHQR LG SM+VERS++ QVKNR + +++  E+KKK          +Y    R R  EE XXXXXXXXXXXXXXXX    +  Q  DPD+AAMMGF GFG  K
Sbjct:    9 HRRKWDRDEYEKRAKERAE-GDNEK---------RSLSDDDEDGCGPSVGPSSSREKKPQRELLKPRQYKVDLDSRLGKTTVISKTADHSQAGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSSLDQVKNRLEMNRRKVEEKKK----------EYNLSERIREVEEXXXXXXXXXXXXXXXXXRKIDSEDQGLDPDMAAMMGFSGFGGSK 208          
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Match: W2PLF3_PHYPN (U1-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PLF3_PHYPN)

HSP 1 Score: 141 bits (356), Expect = 4.660e-38
Identity = 122/232 (52.59%), Postives = 147/232 (63.36%), Query Frame = 0
Query:   13 VHRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSKKEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQGGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFKKHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEAXXXXXXXXXXXXXXXXXXXXAAQFE-----------------DPDIAAMMGFGGFGPKK 227
            V R+TWDR +YE  A+ R E     +E E      +S KEEF++A  GAAGPAGS RAFL+ R NK+ LES +G  +VV S    S  GG++CE C+C LKDS+ YLDHINGKKH R LG+SMRVERSTV QVKNR +   + + D     A K  A+EDYE + +  AEEE XXXXXXXXXXXXXXXXXXX   Q +                 D ++ AMMGFGGFG  K
Sbjct:   16 VTRQTWDRAHYEKLAQLRAE---GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVKSDDV-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRKWDPLM--AKKLDAMEDYEKKLKA-AEEEXXXXXXXXXXXXXXXXXXXXALEQDKSDDADKKPEAADEALDADAEMMAMMGFGGFGGSK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKT3_9PHAE2.790e-8269.60U1-type domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZCC8_9STRA3.770e-5861.16U1-type domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2WR40_9STRA3.790e-4856.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U2Z2_9STRA9.050e-4845.00Zinc finger matrin-type protein 2 n=1 Tax=Nannochl... [more]
A0A4D9DA28_9STRA1.240e-4153.09U1-type domain-containing protein n=1 Tax=Nannochl... [more]
UPI000719CFDE6.120e-4049.07zinc finger matrin-type protein 2-like n=1 Tax=Pri... [more]
A0A7M7NK23_STRPU2.300e-3942.99Matrin-type domain-containing protein n=2 Tax=Echi... [more]
A0A8B7XWW6_ACAPL3.160e-3950.23zinc finger matrin-type protein 2-like n=3 Tax=Val... [more]
UPI00026586011.990e-3850.91zinc finger matrin-type protein 2 n=1 Tax=Galendro... [more]
W2PLF3_PHYPN4.660e-3852.59U1-type domain-containing protein n=11 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..207
NoneNo IPR availablePFAMPF12874zf-metcoord: 103..127
e-value: 1.2E-5
score: 25.6
NoneNo IPR availableGENE3D3.30.160.60coord: 95..133
e-value: 2.5E-6
score: 28.9
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 100..134
e-value: 5.5E-7
score: 39.2
IPR040107U4/U6.U5 small nuclear ribonucleoprotein component Snu23PANTHERPTHR45986FAMILY NOT NAMEDcoord: 8..227
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 99..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:1074378..1076651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.165.1mRNA_S-ischiensis_contig1.165.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 1074339..1077403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.165.1 ID=prot_S-ischiensis_contig1.165.1|Name=mRNA_S-ischiensis_contig1.165.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=228bp
MSKDLGYKQTQDVHRRTWDRDYYEARAKERIEKGDDFVEAEPEAPGPRSK
KEEFKSAEYGAAGPAGSQRAFLQNRKNKVDLESRLGKTQVVSSAAAPSAQ
GGWWCETCKCLLKDSLNYLDHINGKKHQRALGFSMRVERSTVSQVKNRFK
KHKQDEEDKKKGNAGKPSALEDYEARTRERAEEEARRKRQKKEAKSAARQ
KEEEEAAQFEDPDIAAMMGFGGFGPKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR040107Snu23
IPR036236Znf_C2H2_sf