prot_S-ischiensis_contig1.1209.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1209.1
Unique Nameprot_S-ischiensis_contig1.1209.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length967
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 184..243
e-value: 7.5E-11
score: 42.0
coord: 337..398
e-value: 5.7E-6
score: 26.3
coord: 774..835
e-value: 7.0E-11
score: 42.0
coord: 252..311
e-value: 3.9E-9
score: 36.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 388..421
e-value: 3.7E-4
score: 18.5
coord: 199..233
e-value: 9.3E-4
score: 17.2
coord: 753..787
e-value: 5.5E-5
score: 21.1
coord: 266..300
e-value: 2.9E-6
score: 25.1
coord: 166..198
e-value: 1.8E-5
score: 22.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..298
score: 11.334
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 490..524
score: 8.999
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 632..666
score: 6.358
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..419
score: 10.271
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 595..629
score: 7.235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 9.219
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 420..454
score: 8.802
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 350..384
score: 8.835
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 560..594
score: 7.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 751..785
score: 10.523
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 822..857
score: 10.183
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 162..196
score: 10.172
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 525..559
score: 7.158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 11.466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 716..750
score: 8.287
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 858..896
score: 5.568
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 786..821
score: 9.471
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 423..587
e-value: 3.3E-9
score: 36.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 328..454
e-value: 1.9E-23
score: 84.7
coord: 455..573
e-value: 7.1E-23
score: 82.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 710..899
e-value: 1.8E-34
score: 121.5
coord: 125..243
e-value: 9.2E-23
score: 83.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 244..321
e-value: 2.8E-17
score: 65.2
coord: 577..709
e-value: 9.7E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 603..794
coord: 557..743
coord: 498..597
coord: 387..499
coord: 334..393
coord: 135..312
coord: 715..871
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..967
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:8189990..8206242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1209.1mRNA_S-ischiensis_contig1.1209.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 8189960..8206242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1209.1 ID=prot_S-ischiensis_contig1.1209.1|Name=mRNA_S-ischiensis_contig1.1209.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=967bp
MKPPLSLSLWASHQPSLPFGVSEPPSGRAWGCGLRFNQVNRHRRPRPSWA
SASGTEDCTMTSQGPGQGRGRGRRRAVVPLDETSRARPGRGPHEGVKKGK
LNVPVDSAWDARWSKEGKGPTDQDKSANKFKVDTIMAVLDCTDYAKLRKL
LLKAETITVPMTEKEYTILLNGAGRVRDWKRAVSLLEDMKGHGLRPNVFS
YTAAISACARAGMQGPALDLLAEMEENGVTPNAYTMSSCIAACQEKDRAL
ALLEDMPSKGLKRGVYAYSSAIKACEREGDWRQAVSLLRDMEAEGVEPNV
ISYSSAMAACSKAPPETKTGQVPSTPDEAPQAAVALRLLEEMRARGLRPN
NYTYSPAIAACGLVGDWETALELLSECRESSGTPADFVWNAAITTCGNSG
NWEAALRLLWEMKKCGQPPDACSYCAAVDACGRSLKWRTALKLLERARKE
GIVLGMPSYGAAMAALERAERPNESLQLLEDMRTHGLSPNEYLYTGAMST
LLKSDKYGEVLGLLEEMQTNGPKPETGHYTLAIQACAGLQEWERALQLVA
KMHSQRVKRDARAYQAVMKACERAHSWRALLTVLDVIKAENLIPSQASYQ
LSLTACAHLGKWERALLILDEAQARGRIQPGRVWMHNLALNACRQTGQWQ
AAETLLNDMLVKAARGGDPPGTAIVPDERSFAEVVCAAEVAGEEKEADRL
WGTMEAYLGDRGGGPHLSTYNRVLMALSQNRLYARGRKVFRRLLASPVSP
DEVSCTFVMVGCVDMGLWKEALALLKLMKDAGLQPNVLCYTNAIAACANH
GGKADTAMKLLKTMHEEGQQPNTITYNAALGALGGTRGTGGHAMRLFQRM
LREGLEPDHLTYQALIAACVDEEGSSGNQPAADWAFRDGERRGVLVVWER
QLQPSVGKGLDATPLALDFHGFALPTAEAGMRVTLARMAKAWADRHRQER
PEASTEGATAVGQAPLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf