prot_S-ischiensis_contig1.1204.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1204.1
Unique Nameprot_S-ischiensis_contig1.1204.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length239
Homology
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: D8LT98_ECTSI (Conserved C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT98_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 6.590e-35
Identity = 75/154 (48.70%), Postives = 102/154 (66.23%), Query Frame = 0
Query:   58 WAELRAKIDVGEYQRGLQAAHESVQIGHETLEGLADQQERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLPTSHFRRADRDASSSAAPPGPGRGVAGAPNRDRGLSAAAAAADDGPVSGFICPDCRQKMGSAEALMTHYRSAH 211
            WA++R  IDV E +RGL++A+ESV++G E LE L DQ+ERLERSEM+LDST+Y +++SAR+LRGM+FWG+++N FSDDP++P        + A S+ A  G   G  G  N D           D P  GFICPDCR    +++ L+ HY SAH
Sbjct:   80 WAQVRDSIDVTERRRGLRSAYESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARILRGMTFWGKIRNAFSDDPQVP-------QQPAGSTRA--GTATGDGGNGNDD----------PDTPAEGFICPDCRGLFPTSDVLVAHYGSAH 214          
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: A0A6H5JRH3_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH3_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 9.190e-34
Identity = 77/168 (45.83%), Postives = 105/168 (62.50%), Query Frame = 0
Query:   58 WAELRAKIDVGEYQRGLQAAHESVQIGHETLEGLADQQERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLPTSHFRRADRDASSSAAPPGPGRGVAGAPNRDRGLSAAAAAADDGPVSGFICPDCRQKMGSAEALMTHYRSAHEEPRTPPAPKGRGW 225
            WA++R  IDV E +RGL++AHESV++G E LE L DQ+ERLERSEM+LDST+Y +++SARVLRGM+FWG+++N FS+DP++P        + A ++ A    G G  G  N D           D P  GFICPDCR    +++AL+ H+  AH           RGW
Sbjct:   80 WAQVRDSIDVTERRRGLRSAHESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARVLRGMTFWGKIRNAFSNDPEVP-------QQPAGNTRAGTATGNGGNG--NYD----------PDVPAEGFICPDCRGLFPTSDALVAHHGLAHTIASADDDEDARGW 228          
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: A0A835YH57_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH57_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.040e-16
Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 0
Query:   96 ERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLPTSHFRRADRDASSSAAPPGPGRGVAGAPNRDRGLSAAAAAADDGPVSGFICPDCRQKMGSAEALMTHYRSAHE 212
            E L+RS M++DSTQY++DKSARV+RGM+ WGR+QN+FSD+P    +         SSSA                              + G+ICP+CR +  SA+ L+ H+ S HE
Sbjct:   53 ESLQRSAMVVDSTQYLLDKSARVIRGMTMWGRMQNFFSDEPAPVLAASTPISNSTSSSAG-----------------------------MEGYICPECRMRCASADDLLAHFASLHE 140          
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: A0A4D9CSU3_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSU3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.090e-15
Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 0
Query:   60 ELRAKIDVGEYQRGLQAAHESVQIGHETLEGLADQQERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLP 139
            + ++K ++  Y   L+ AHESV IG ETL  +A QQE L+RSE ++DS  YV+ KSAR LRGM++WG ++NYFS++P+ P
Sbjct:   51 QFKSKDELDAY---LRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNLYVIKKSARTLRGMTWWGSLRNYFSEEPEAP 127          
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: A0A7S2BIZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BIZ0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.980e-7
Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   63 AKIDVGEYQRG--LQAAHESVQIGHETLEGLADQQERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLPTSHFRRADRDASSSA 154
            A+++  E +R   LQ A +++  G+ T+  LADQQE L+R+E+I +S +Y++ KS R LRGM++ G V N  S +P+ P     R   D+  +A
Sbjct:   58 AEVEKWERERNQALQEADQALSTGNATMGTLADQQETLDRAELIAESNEYMLAKSRRTLRGMTWSGWVANMVSSEPEAPRGARERRAGDSRPNA 151          
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: A0A7S4E636_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E636_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 6.180e-7
Identity = 29/67 (43.28%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   73 GLQAAHESVQIGHETLEGLADQQERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLP 139
            GL A  E++Q G  TL+ L +Q E+L ++E++ DS +Y++D+SAR +RGM++ G +QN F+  P +P
Sbjct:   14 GLAALDEALQAGAATLQRLEEQGEQLHQTEIVADSNKYLLDRSAREIRGMTWGGWLQNQFTSGPAVP 80          
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Match: K3WBG5_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBG5_GLOUD)

HSP 1 Score: 54.7 bits (130), Expect = 4.130e-5
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   72 RGLQAAHESVQIGHETLEGLADQQERLERSEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLPTSHFRRAD 147
            + L+A  ES+QI  ET   L+ Q E+L+RS+   + TQY VD S RVLRGM++ G + N  S  P+     ++ A+
Sbjct:   30 QSLRAVAESLQIARETAHTLSMQSEQLDRSKRAAEDTQYAVDLSKRVLRGMTWSGWLYNAMSSVPQQVADRYKPAN 105          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LT98_ECTSI6.590e-3548.70Conserved C2H2 zinc finger protein n=1 Tax=Ectocar... [more]
A0A6H5JRH3_9PHAE9.190e-3445.83t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YH57_9STRA6.040e-1638.46C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A4D9CSU3_9STRA7.090e-1551.25t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2BIZ0_9STRA3.980e-738.30Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4E636_9STRA6.180e-743.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K3WBG5_GLOUD4.130e-540.79t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 68..123
e-value: 6.0E-10
score: 41.1
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 70..122
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 190..211
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 188..216
score: 9.369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:8142975..8144648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1204.1mRNA_S-ischiensis_contig1.1204.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 8142975..8144650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1204.1 ID=prot_S-ischiensis_contig1.1204.1|Name=mRNA_S-ischiensis_contig1.1204.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=239bp
QLRRRKNGPPRNGMSEEDRAELFARPTTPARHESDGSPRSDQGESKSGTN
SGKAATSWAELRAKIDVGEYQRGLQAAHESVQIGHETLEGLADQQERLER
SEMILDSTQYVVDKSARVLRGMSFWGRVQNYFSDDPKLPTSHFRRADRDA
SSSAAPPGPGRGVAGAPNRDRGLSAAAAAADDGPVSGFICPDCRQKMGSA
EALMTHYRSAHEEPRTPPAPKGRGWEEAADAAAARASPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type