prot_S-ischiensis_contig1.1169.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1169.1
Unique Nameprot_S-ischiensis_contig1.1169.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length892
Homology
BLAST of mRNA_S-ischiensis_contig1.1169.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.210e-14
Identity = 196/723 (27.11%), Postives = 300/723 (41.49%), Query Frame = 0
Query:  193 LSEDSSRGLPPPPPMPSSSLPRLASLKAYELTAEQLAVVDRERHLAADHIRRLNQALAGFLAFADLETVHVSLARAGGAQLPQHAPAHGASLDGSLLGASGGDAGSEPPPTSARTEGSTESKQQRARVKRLIVRVCGDKNRRALAQAWRQLCQHAAAAKAAAEGKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXAGAAAEVEAAEVAA---RRT--------------RVKRLIVRVCGDKDRRAISQAWRRLCGHKAAAAATEAAAASEAAQLGVQRARVKRLICRICADKDRRAL-------SRAWR----QLSHCAASAAA---------------AEAAAE-------GNAAQVEVQRSRVKRLIIRLCAGKDRRALSVAWRQLSQHAATALAAEGAAESEAAQLEAQRARVKRLIIRLCAGKDQRALSLAWRQLSRHAAAAAAAEGAAESQTAQLEA-----QRARVKRLIIRLCAGKDQRALSLAWRQLSRHAAAAAAXEGAAESESAQLEAQRARVKRLIIRLCAGKDQRALSLAWRQLSRHAVQAATAEAATESETAQVEDQRTRVKRLIIRMCADMDRRALSRAWRKLSLHAAV-----GTVAQATDRGEAARRQVERARVRRLIIRVCTDKDRQALSRAMRQLSQHRLSAAATETAKESQATQLEAQQARLKRLIARLCHNRARQGLQRAWRQFCLHTA 855
            +SE SS GLP PP +PS  LP +  ++ Y LT +Q   +D ER L +DH+RRLNQ LAG L++ ++  +H    +    Q    AP+HGA++  S       +A   P   S R             ++RL+ RVC D+ +R + + W +LC   AA+ + AEG  S                                       A A   A+ EAA V A    RT              R K LI RVC ++DR ++   W RL  H A  +  E AAA   A +    AR + +     A     AL        R W     ++    ASAAA               AEAAA        G+    +++  +VK++   +   + RR      + L   AAT  AA  A  S A ++E + A  K  + R    + +  ++ A  Q  R  A  + +    + +   +EA     Q   +K LI R+C  +D+R+L  +W +L  HAA+  A +   +  +A  EA R      + +      +RA  ++ +      V A   + A E+E A  E +R +  R++ R+  D +RR L R+W +L  HAA      G  A AT    AAR  VE   +R       TD                  +  A  + + S+  + E ++ R    + R+  ++ R+ L R W + CLH A
Sbjct:   68 VSEVSSGGLPAPPLIPSGPLPAIGVIREYFLTGQQQHDLDHERRLTSDHMRRLNQVLAGHLSYLEVSNIHAEREKLQ-LQALASAPSHGAAVGYSASLNDSKNASGTPRGGSLRQN----------ILRRLMGRVCRDRAKRLIFRGWSRLCL--AASLSTAEGT-SAVATAAVRAARPEVMEKEAEEATETVENPSRAANVSAEVAIAREHAQREAASVLAAEHHRTIKDTEDGAREHQLRRTKMLITRVCRERDRASMFCGWNRLYLHAATLSTAEGAAA---AAVMADSARGRAMEEETGAAAGSTALVETPGKVPREWEHRLERMKRLGASAAATXXXXXXXXXXAQKEAEAAAASPRETAFGSKLMADLE-LKVKKIEQTVQEHQLRRV-----KGLGASAATTSAAR-ATRSTAMEMETEEATDKTEVSRRAEDEIEN-VAAAREQARRETARGSNSVAKLQHKITDMEAILREHQLRWIKILITRVCGDRDRRSLFRSWSRLCLHAASVGAID---DVSAAAAEAARVAKADAVEKQAPTPAERA-KVSEKGHEDSMVAADLEKRAEEAEKAVDEQRRQQTVRMVARVLRDRNRRLLFRSWGRLCSHAASLNAVEGASAAATPAVRAAR--VEAKEMRTAAAASSTD------------------AIEAKSSTERSREEEQEPKRLRATTTMLRVSKDKDRRLLFRGWSRLCLHAA 741          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ96_ECTSI2.210e-1427.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 813..833
NoneNo IPR availableCOILSCoilCoilcoord: 757..777

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7901068..7910962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1169.1mRNA_S-ischiensis_contig1.1169.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7901068..7911123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1169.1 ID=prot_S-ischiensis_contig1.1169.1|Name=mRNA_S-ischiensis_contig1.1169.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=892bp
MAQEPPLTASSVESPPPGTPFDSLDLSPSAPAPGSGRPPLHGGVRASYDE
GRDLGLGDLTPLSDTRDSALQLQLGSAPSPTGGGHGVGGTSEGQSYRVGT
GTGTLLEREGIHLPSYGESTSAGPVPGSAPGPARTASEAQGSSGVMMRSL
DVGHSTSSTGSNLLTGTGTNQDDSHDSSSMDGGLGALQDTISLSEDSSRG
LPPPPPMPSSSLPRLASLKAYELTAEQLAVVDRERHLAADHIRRLNQALA
GFLAFADLETVHVSLARAGGAQLPQHAPAHGASLDGSLLGASGGDAGSEP
PPTSARTEGSTESKQQRARVKRLIVRVCGDKNRRALAQAWRQLCQHAAAA
KAAAEGKASEEQAQRARVKRLIIRVCGDKDRRTLAQAWKQIRRYAAAAAA
AGAAAEVEAAEVAARRTRVKRLIVRVCGDKDRRAISQAWRRLCGHKAAAA
ATEAAAASEAAQLGVQRARVKRLICRICADKDRRALSRAWRQLSHCAASA
AAAEAAAEGNAAQVEVQRSRVKRLIIRLCAGKDRRALSVAWRQLSQHAAT
ALAAEGAAESEAAQLEAQRARVKRLIIRLCAGKDQRALSLAWRQLSRHAA
AAAAAEGAAESQTAQLEAQRARVKRLIIRLCAGKDQRALSLAWRQLSRHA
AAAAAAEGAAESESAQLEAQRARVKRLIIRLCAGKDQRALSLAWRQLSRH
AVQAATAEAATESETAQVEDQRTRVKRLIIRMCADMDRRALSRAWRKLSL
HAAVGTVAQATDRGEAARRQVERARVRRLIIRVCTDKDRQALSRAMRQLS
QHRLSAAATETAKESQATQLEAQQARLKRLIARLCHNRARQGLQRAWRQF
CLHTALTAERGSSREKQLLWAGRMMVRRCGDWERRALSRGYT
back to top