prot_S-ischiensis_contig1.1167.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1167.1
Unique Nameprot_S-ischiensis_contig1.1167.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length669
Homology
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BLAST of mRNA_S-ischiensis_contig1.1167.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 6.160e-9
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0 
Query:  407 PEVFLGSGASGIGMVALQGENARQLRTYVAGKARDLQRARREAEELRWRCTNSRNRWS-AMRREVRALRRGLADERLGSEKLGELLQDMVKDRDQR 501
            PEVFLG G  GIGMVALQGE AR+LR YVA K RDL+RAR E+E+ R RC   + R +  ++ E  +  R   +E    +KL  +L +M+ +RD+R
Sbjct: 3112 PEVFLGEGTGGIGMVALQGEGARRLRAYVASKGRDLKRARVESEQWRVRCEAMQRRLTNVLQGEEGSEPRASTNE---GKKLAAILLNMLDERDRR 3204
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ96_ECTSI6.160e-948.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 332..352
NoneNo IPR availableCOILSCoilCoilcoord: 192..212
NoneNo IPR availableCOILSCoilCoilcoord: 435..462
NoneNo IPR availableCOILSCoilCoilcoord: 144..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7889064..7897367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1167.1mRNA_S-ischiensis_contig1.1167.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7889064..7897398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1167.1 ID=prot_S-ischiensis_contig1.1167.1|Name=mRNA_S-ischiensis_contig1.1167.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=669bp
MLRRLTARLCAGRERQALFKAWHSLTRHTATARAAAAAEERTILRGQATD
SDVQRLRSKRLVARVCASRDYQNKVLAFARLRSHAAAVAAASEREGMEAA
RRERDTGAARERFKRLVMRVCADRDRRAMLRAWHSLVHRGAEAARAARAR
EEELEQQRVRARHVVMRVCADRDRRAMLRAWHSLVHRGAEAARAARAREE
ELEQRRTRARRVISRLCGDASRRALAGAWRKLYQNVHHANATAAAAAAAA
ATAAAETSAAEVQAEAASHKPPNRPEHAVGGDLWQKIEMLGAYAVQLQTK
VAHLEGEVDVSARSLAALHGSGVGGGDTARALLHQERNVRLLRRLLAEAQ
DELHMSAGGGGGSSGGGGHDPNGSFFRPPAGYPGVGGDQTQRHRQQQQQQ
QQEEGGPEVFLGSGASGIGMVALQGENARQLRTYVAGKARDLQRARREAE
ELRWRCTNSRNRWSAMRREVRALRRGLADERLGSEKLGELLQDMVKDRDQ
RIAQAHQKMVVLAAGEGDKGAVYNKAASTRSPGHRSHHHGHDNGMADAGG
SGSPRDGGRGGRSQRRWAAEFLVAQMASLKDEASHQPHHRPPPPTPCRGA
PAPPQGEHPSPGQGGPPPAGPPKRLPRPPSSKRAGPAAGQRRGVGGSPGG
DLGRSCTLLVLAPALGGS*
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