mRNA_S-ischiensis_contig1.1167.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1167.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 6.330e-9 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 2
Query: 1250 PEVFLGSGASGIGMVALQGENARQLRTYVAGKARDLQRARREAEELRWRCTNSRNRWS-AMRREVRALRRGLADERLGSEKLGELLQDMVKDRDQR 1534
PEVFLG G GIGMVALQGE AR+LR YVA K RDL+RAR E+E+ R RC + R + ++ E + R +E +KL +L +M+ +RD+R
Sbjct: 3112 PEVFLGEGTGGIGMVALQGEGARRLRAYVASKGRDLKRARVESEQWRVRCEAMQRRLTNVLQGEEGSEPRASTNE---GKKLAAILLNMLDERDRR 3204 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1167.1 >prot_S-ischiensis_contig1.1167.1 ID=prot_S-ischiensis_contig1.1167.1|Name=mRNA_S-ischiensis_contig1.1167.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=669bp MLRRLTARLCAGRERQALFKAWHSLTRHTATARAAAAAEERTILRGQATDback to top mRNA from alignment at S-ischiensis_contig1:7889064..7897398- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1167.1 ID=mRNA_S-ischiensis_contig1.1167.1|Name=mRNA_S-ischiensis_contig1.1167.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8335bp|location=Sequence derived from alignment at S-ischiensis_contig1:7889064..7897398- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7889064..7897398- >mRNA_S-ischiensis_contig1.1167.1 ID=mRNA_S-ischiensis_contig1.1167.1|Name=mRNA_S-ischiensis_contig1.1167.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4014bp|location=Sequence derived from alignment at S-ischiensis_contig1:7889064..7897398- (Schizocladia ischiensis KU_0333)back to top |