prot_S-ischiensis_contig1.1155.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1155.1
Unique Nameprot_S-ischiensis_contig1.1155.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length469
Homology
BLAST of mRNA_S-ischiensis_contig1.1155.1 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.520e-15
Identity = 91/275 (33.09%), Postives = 115/275 (41.82%), Query Frame = 0
Query:  163 AEAVVDGLGPEGATRVLWGAPALLEDMPPEFFYRLAARQARADRARALGSDLLSQMAAQVWALGGGTAAAAPAGAWVPVGGEGGGSAAGSKNLCGLGPRMSWVACEELLAFFARGTDGEEVAAREPLPSALAGGALGDGGDDVLPSTMMTAVWMGRAAHAARXXXXXXXXXXXXXXXGEV----GVQDHGLDQQELQQDPA-----LLQDAARRLGLNLLLPGRSHLGVCKSDAA-CVLCGLPLPLAGPA----GAAATAAEVVPPCGHPYHALC 423
            AEAV+DG+GPE    VL   P LLE +PP+FF  LA RQA   + RAL + LL Q  A +WA  G   A             G G    S +   LGPR++W+ACEEL +FF    D    A+  P  + L GG  G  G     S            H  R                 V    G  D GL +   +++P      L+      L LNL+LPG +H G     A+ C  CGL L   G A    G       V+  CG   H+ C
Sbjct: 1585 AEAVLDGVGPEATGDVLAACPHLLEGIPPKFFQDLADRQAALSQQRALEAALLHQATAAIWASRGRRRATV----------TGAGDTGDSSDASPLGPRLAWLACEELTSFFQ---DNANSASASPN-ARLLGGEPGSAGSSCAGSPP-------GLQHHHRATMEVFAAGIGGDNLSRVFNGSGGNDDGLFRSLRRKEPGSVSQGLVASMGVNLDLNLVLPGNAHRGAAFDPASPCGFCGLALSGGGVACDGGGEEGEGELVLCACGRGIHSRC 1838          
BLAST of mRNA_S-ischiensis_contig1.1155.1 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 4.590e-10
Identity = 85/274 (31.02%), Postives = 114/274 (41.61%), Query Frame = 0
Query:  163 AEAVVDGLGPEGATRVLWGAPALLEDMPPEFFYRLAARQARADRARALGSDLLSQMAAQVWALGGGTAAAAPAGAWVPVGGEGGGSAAGSKNLCGLGPRMSWVACEELLAFFARGTDGEEVAAREPLPSALAGGALGDGGDDVLPSTMMTAVWMGRAAHAARXXXXXXXXXXXXXXXGEV----GVQDHGLDQQELQQDPA-----LLQDAARRLGLNLLLPGRSHLGVCKSDAA-CVLCGLPLP---LAGPAGAAATAAEVVPPCGHPYHALC 423
            AEAV+D +GPE    VL   P LLE +PP+         A   + RAL + LL Q  A +WA  G     A           G G+  GS +   LGPR++W+ACEEL +FF    D    A+  P  + L GG  G  G    PS   +   +    H  R                 V    G  D GL +   +++P      L+      L LNL+LPG +H G   + A+ C  CGL L    +A   G       V+  CG   H+ C
Sbjct: 1052 AEAVLDAVGPEATGDVLAACPHLLEGIPPK---------AALSQQRALEAALLHQATAAIWASRGRRRTTA----------TGAGNKGGSSDASPLGPRLAWLACEELTSFFQ---DNANSASASPN-ARLLGGEPGSAG----PSCAESPPGL---QHHHRATTDVFAAGVGGDNLSRVFSGFGGNDDGLFRSLRRKEPGSVSQGLVATMGVNLDLNLVLPGNAHRGAAFNPASPCGFCGLALSGGAVACDGGGEGEGKLVLCACGRGIHSRC 1295          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF16_ECTSI1.520e-1533.09PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMZ7_9PHAE4.590e-1031.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7824069..7825917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1155.1mRNA_S-ischiensis_contig1.1155.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7824069..7825917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1155.1 ID=prot_S-ischiensis_contig1.1155.1|Name=mRNA_S-ischiensis_contig1.1155.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=469bp
AGSPDTGHGDEHGGAEASSSAASATATTAAAATLEGFARQHHQQQQAEEG
YGGAAVGRRGGGPSLSPRPRSCLGSSSRRGSVEVPRTVATVRALSERCHG
GGDGGGGSARRDRSLRGGSEAQSVPLSSRLSLSPLSPPRRRSLPSSGWLG
VGGGPGMSALELAEAVVDGLGPEGATRVLWGAPALLEDMPPEFFYRLAAR
QARADRARALGSDLLSQMAAQVWALGGGTAAAAPAGAWVPVGGEGGGSAA
GSKNLCGLGPRMSWVACEELLAFFARGTDGEEVAAREPLPSALAGGALGD
GGDDVLPSTMMTAVWMGRAAHAARAHEAAAAAAAMAATAGEVGVQDHGLD
QQELQQDPALLQDAARRLGLNLLLPGRSHLGVCKSDAACVLCGLPLPLAG
PAGAAATAAEVVPPCGHPYHALCGQQAVLQPPPCRQCLRERQRRGQRRLH
QQHLRRRDSPEELGHGWTE
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