prot_S-ischiensis_contig1.1152.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1152.1
Unique Nameprot_S-ischiensis_contig1.1152.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length81
Homology
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BLAST of mRNA_S-ischiensis_contig1.1152.1 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 9.110e-10
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0 
Query:    2 GPEQWEDERAAGFVREYGAYVEVDAVAAAASARELGLALGQALELAGLDRDFCRRDRELRKLL 64
            GP QW++E+A GF+++YGAY+E DAVAAAAS RE+  AL + L LA    D+  ++R L +LL
Sbjct:  296 GPLQWDEEKAVGFIQDYGAYLEADAVAAAASCREMEWALDEVLRLAEQCEDYKSKERVLHQLL 358
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BLAST of mRNA_S-ischiensis_contig1.1152.1 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.340e-9
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0 
Query:    2 GPEQWEDERAAGFVREYGAYVEVDAVAAAASARELGLALGQALELAGLDRDFCRRDRELRKLL 64
            GP QW++E+A GF+++YGAY+E DAVAAAAS RE+  AL + L LA    D+  ++R L +LL
Sbjct:  827 GPLQWDEEKAVGFIQDYGAYLEGDAVAAAASCREMEWALDEVLRLAEQCEDYKSKERVLHQLL 889
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMZ7_9PHAE9.110e-1052.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF16_ECTSI2.340e-952.38PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7821128..7821719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1152.1mRNA_S-ischiensis_contig1.1152.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7821128..7821720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1152.1 ID=prot_S-ischiensis_contig1.1152.1|Name=mRNA_S-ischiensis_contig1.1152.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=81bp
GGPEQWEDERAAGFVREYGAYVEVDAVAAAASARELGLALGQALELAGLD
RDFCRRDRELRKLLGIGWGLGVAATSPPWRS
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