prot_S-ischiensis_contig1.1144.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1144.1
Unique Nameprot_S-ischiensis_contig1.1144.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length342
Homology
BLAST of mRNA_S-ischiensis_contig1.1144.1 vs. uniprot
Match: D8LF17_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF17_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 3.160e-29
Identity = 104/279 (37.28%), Postives = 132/279 (47.31%), Query Frame = 0
Query:    7 SPEAVVVAQEQCPIVQLDLGRTRTALPGVPP---ECDVLLAMTRRRALLLYFPCAPGSRMLPPFETAIDLDILPARLSTAGE---------------GRHPELGGCLWAKPAQPPNHLNQRRRDPSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDA-NLRPRPVSCALIAQPGGRLWRVGLYDGEVESTHRPTPTLGAILAGWRGGGDGGQQAALGTVDLGRLQVIDVGGSEAVLCWRLSGGGGDEGTGGVILLQPSTDTIVDCHVGLGEIKDIS 266
            SP+A+VV     P V LDLGRTR +LPG       CDVLL MTR++A+L YF       ++ P +T++DL+++    +  G+                   + GGCLW  PAQ P             XXXXXX                         A    PR V  A +AQPGGRLWRVGL DGEVESTHRP         G   GGDG        V+LG +  +DVG + A+LCWR SG    +G G   LL P+T + V    G+    D+S
Sbjct:  249 SPQAIVVGHTGSPGVSLDLGRTRASLPGATKGFLACDVLLVMTRKQAVLFYFAVGEDVSIVAPHKTSVDLNVVDHTTADTGQPSGGNXXXXXXXXXXXSRTDFGGCLWG-PAQMPGVGGXXXXXXXXXXXXXXXARGRSSAGMRTPERRESCEALPAAAAVAAAPRAVLFAYVAQPGGRLWRVGLSDGEVESTHRPL--------GVDEGGDG--LPVESGVELGEMWAVDVGDARALLCWR-SGFTSKKG-GEFALLDPNTHSFVAACPGMSGTVDVS 514          
BLAST of mRNA_S-ischiensis_contig1.1144.1 vs. uniprot
Match: A0A835ZFL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL9_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.480e-10
Identity = 62/183 (33.88%), Postives = 80/183 (43.72%), Query Frame = 0
Query:   10 AVVVAQEQCPIVQLDLGRTRTALPGVPPEC-DVLLAMTRRRALLLYFPCAPG-SRMLPP------FETAIDLDILPARLSTAGEGRHPELGGCLWAKPAQPPNHLNQRRRDPSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDANLRPRPVSC-ALIAQPGGRLWRVGLYDGEVESTHRP 183
            A+VVA+E  P+VQLD G       GV     DVLL ++ RRALLLYF   P   +  PP         A+DLD+ P  +  AG+      GGCLW         L +   D +                                +  + P  V   A ++QPGGRLW + L DGEV+STHRP
Sbjct:  157 AMVVAKEGAPVVQLDWGE------GVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTH-GGCLWGP-------LPEAGGDGA------------------------------GDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRP 295          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF17_ECTSI3.160e-2937.28Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A835ZFL9_9STRA4.480e-1033.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7800795..7803946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1144.1mRNA_S-ischiensis_contig1.1144.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7800795..7803948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1144.1 ID=prot_S-ischiensis_contig1.1144.1|Name=mRNA_S-ischiensis_contig1.1144.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=342bp
QLEGGQSPEAVVVAQEQCPIVQLDLGRTRTALPGVPPECDVLLAMTRRRA
LLLYFPCAPGSRMLPPFETAIDLDILPARLSTAGEGRHPELGGCLWAKPA
QPPNHLNQRRRDPSPGGPGNGEGGAGPDPSSASTGQAGGAAAAVATDANL
RPRPVSCALIAQPGGRLWRVGLYDGEVESTHRPTPTLGAILAGWRGGGDG
GQQAALGTVDLGRLQVIDVGGSEAVLCWRLSGGGGDEGTGGVILLQPSTD
TIVDCHVGLGEIKDISVPRVVPGDAAAAAAATATTATGEPPPLVELAATG
PCVLHGRDGVISRLSYSTTPSRLPALLAQAPLSLSAASTAAS
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