prot_S-ischiensis_contig1.1142.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1142.1
Unique Nameprot_S-ischiensis_contig1.1142.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length335
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 96..298
e-value: 0.0045
score: 12.8
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 136..290
e-value: 3.7E-14
score: 52.9
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 94..298
score: 10.936
NoneNo IPR availablePANTHERPTHR13439:SF0TOPOISOMERASE I DAMAGE AFFECTED PROTEIN 4coord: 143..297
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 143..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 187..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..334
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 267..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7794709..7795713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1142.1mRNA_S-ischiensis_contig1.1142.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7794631..7796832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1142.1 ID=prot_S-ischiensis_contig1.1142.1|Name=mRNA_S-ischiensis_contig1.1142.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=335bp
MCKAHVPSAESNPVPAYTLGKWVWAPAAVALGAWMLAWGPERETGAWDPA
LPTWDAGYPVFLLCEIVRLGGVRLLPVWWKRVAGRADLPAPDIQETFGGN
LVSLGMSLYLIGNLLVGYSGRLTDELPFWHANGDNRTLCHGLSVTMLAYL
LHDLLQICRCWRVVPNPAMVAHHVVFIVITGLGTTYPQPLYLYRVHAILF
SAEASTPLLNSRWILRNIVRLNKNAAVMTAISLGFFLLFTTTRIGLYLFL
IMDLFRRTGELGMPPPFQKVFTAAVALSYLINLHWFSVIIETLRKRKVRT
PSTDTPSSGLAAKPAPAEATGARAPGAGGSLKVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom