prot_S-ischiensis_contig1.1136.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1136.1
Unique Nameprot_S-ischiensis_contig1.1136.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length224
Homology
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BLAST of mRNA_S-ischiensis_contig1.1136.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.930e-15
Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = 0 
Query:   31 FAGVTRDIETIAQGDLPASMQLLASLQAAGGSGSKPSANASIFERLSSTTTESRRLKVNDKNKVQENFRRKVHSTG--RKKDFKVVGGHGHPPPAPTFQPVVPGARGFPAG 139
            FAGVT D+E I QG +P SMQL+A + A  G         S+F+RL+STTTESRR KVND++++ EN RRK       +KKDFKVV GH            +PGA G P G
Sbjct: 1587 FAGVTSDLEAIRQGRMPESMQLVARVNAEAGG------KVSVFDRLASTTTESRRQKVNDRDQLHENLRRKAKQDAFRKKKDFKVVPGH------------LPGANGLPTG 1679
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BLAST of mRNA_S-ischiensis_contig1.1136.1 vs. uniprot
Match: D8LNZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ6_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 6.590e-15
Identity = 56/118 (47.46%), Postives = 71/118 (60.17%), Query Frame = 0 
Query:   31 FAGVTRDIETIAQGDLPASMQLLASLQAAGGSGSKPSANASIFERLSSTTTESRRLKVNDKNKVQENFRRKVHSTG--RKKDFKVVGGHGHPPPAPTFQPVVPGARGFPAGL-GGSGG 145
            FAGVT D++ I +G +P SMQL+A + A  G         S+F+RL+STTTESRR KVND++++ EN RRK       +KKDFKVV GH            +PGA G P G  GG GG
Sbjct:  520 FAGVTSDLQAIREGRMPESMQLVARVNAEAGG------KVSVFDRLASTTTESRRQKVNDRDQLHENLRRKAKQDAFRKKKDFKVVPGH------------LPGANGLPTGTTGGPGG 619
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW93_9PHAE2.930e-1548.65Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D8LNZ6_ECTSI6.590e-1547.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7740164..7743318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1136.1mRNA_S-ischiensis_contig1.1136.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7740164..7743319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1136.1 ID=prot_S-ischiensis_contig1.1136.1|Name=mRNA_S-ischiensis_contig1.1136.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=224bp
AAPVPRPEDVVSDDMEEDEFNDDDELDGSMFAGVTRDIETIAQGDLPASM
QLLASLQAAGGSGSKPSANASIFERLSSTTTESRRLKVNDKNKVQENFRR
KVHSTGRKKDFKVVGGHGHPPPAPTFQPVVPGARGFPAGLGGSGGSWDAT
ATGTGDAWGGSPGGEVRPTSASSTQGEPMLGGSNSHGEDDAPSSLPAAPL
GRPRGGAGGRPQSPADAHALPAAP
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