prot_S-ischiensis_contig1.1080.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1080.1
Unique Nameprot_S-ischiensis_contig1.1080.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length131
Homology
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A835YY77_9STRA (Cytochrome c biogenesis protein, thiol reduction transmembrane region, CcdA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY77_9STRA)

HSP 1 Score: 170 bits (430), Expect = 5.660e-51
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 0
Query:    2 GLNLLELLTLQLPSFEGGLDTIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGLTWIAPASGAVLISYGTYGALETLY 125
            GLNLLELL   LPS+E G+++  +LPR  RA+ LG+SSALVASPCCTPVLASILGFVASSQDP LGLALLLAYS+GYTTPL+ AG ASGALSR+MSA+GLTWI P S A LISYGT+  L  ++
Sbjct:   95 GLNLLELLNFTLPSWEAGVESFNSLPRVGRAYALGASSALVASPCCTPVLASILGFVASSQDPALGLALLLAYSLGYTTPLMAAGTASGALSRIMSASGLTWITPVSAAALISYGTFTGLGAIF 218          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A4D9CLR8_9STRA (DsbD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLR8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.630e-34
Identity = 72/127 (56.69%), Postives = 99/127 (77.95%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLDTIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAG--LTWIAPASGAVLISYGTYGALETLY 125
            MGLNLL+L++L+LPSF+  L  +   P + +AFLLG++SAL+ASPC TPVLASILGFVA+S +P LG  LL +YS+GY+TPLL+AG  SG ++  ++  G   +W+ PA+GA+LISYGTY +L TL+
Sbjct:  267 MGLNLLDLVSLRLPSFDAALQ-LERFPPSLQAFLLGATSALIASPCSTPVLASILGFVAASGEPYLGAGLLFSYSLGYSTPLLLAGLLSGTVTSFIAKRGDGFSWVTPATGALLISYGTYSSLATLF 392          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A7S2UUE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 6.400e-34
Identity = 76/132 (57.58%), Postives = 96/132 (72.73%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLD-------TIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGLTWIAPASGAVLISYGTYGALETLY 125
            MGL+LL+LL+L LPS  GG+D        +  LPR  RAF LG+SSAL+++PC TPVLA+ILGFVA+S DP+LG  LLLAY+ GYTTPL++AG ASG  S  MS+ GLTW+ P +GA+LI YG    L  L+
Sbjct:  282 MGLSLLDLLSLPLPS-AGGMDGSSADEGLLDRLPRPLRAFGLGASSALISTPCSTPVLAAILGFVATSADPLLGGGLLLAYTAGYTTPLMIAGVASGKASEAMSSKGLTWVTPLTGAILIFYGINSVLNALF 412          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A0G4H6S3_VITBC (DsbD domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H6S3_VITBC)

HSP 1 Score: 119 bits (299), Expect = 1.920e-30
Identity = 63/131 (48.09%), Postives = 93/131 (70.99%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGG-LDTIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAA----GLTWIAPASGAVLISYGTYGALETLYK 126
            MGLN+L L+++  P+F+GG LD    LP+  + FL G +SAL+A+PC TPVL ++LG+VAS+ DP+LG ALL AY++GY +P++ AG ASG L++L++      GL WI P +G +L+ YGT+  L  L+ 
Sbjct:  166 MGLNVLNLVSISFPAFDGGELDEGRKLPKALQDFLFGVTSALIATPCSTPVLTALLGYVASTGDPLLGAALLFAYTLGYASPVVAAGTASGRLAQLLTQGEGREGLRWITPVTGGLLVGYGTFSTLNALFS 296          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: R1BZD3_EMIHU (DsbD domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BZD3_EMIHU)

HSP 1 Score: 118 bits (295), Expect = 1.960e-30
Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFE---GGLDTIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAG-LTWIAPASGAVLISYGTY 118
            +GLNLL++L  +LPS E   GG    ++LPR +RAFL G+SSALVASPC +PVL S+LGFVA+  DP+LG ALL AYS+G TTP+L+AG A+G+ +R++SA     W+ PASG+ L++ GTY
Sbjct:  118 LGLNLLKVLPFELPSLELSTGG----VSLPRPARAFLFGASSALVASPCASPVLVSLLGFVATQGDPLLGAALLTAYSLGETTPVLLAGIAAGSATRIVSAQRRFEWVTPASGSALLAIGTY 235          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A2P8VTB0_9CYAN (Cytochrome C biogenesis protein (Fragment) n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8VTB0_9CYAN)

HSP 1 Score: 112 bits (280), Expect = 2.710e-29
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLDTIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGLT-WIAPASGAVLISYGTYGALETLYKFWP 129
            MGLNLL  L + LPSF G     + LP   +A++LG +  +VASPC TPVLA++L +++S QDPVLG ALLLAY++GY  PL++AG  +  + RL++    + WI PASGA+L+ +G +  L    +FWP
Sbjct:    4 MGLNLLGALPISLPSFNGPAPADLNLPEGLKAYVLGLTFGIVASPCSTPVLATLLAWISSRQDPVLGGALLLAYAIGYVLPLVIAGTFTAFIKRLLAVRQWSSWITPASGALLLGFGVFSLLT---RFWP 130          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: C1MSL3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MSL3_MICPC)

HSP 1 Score: 112 bits (279), Expect = 4.980e-28
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLDTI-MTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGLT-WIAPASGAVLISYGTYGALE 122
            MGLNLLE++ +Q PSF    D   ++LP  ++++L G + AL ASPC TPVLA++LG+VASS DPV G ALLL Y+ GY  PLL A   +G+L ++MSA   T W+ PASG +L++ GTYG L 
Sbjct:  108 MGLNLLEVIVVQFPSFGNDFDARKLSLPPPAQSYLAGLAFALAASPCSTPVLATLLGYVASSGDPVGGGALLLTYTSGYVAPLLAAATVTGSLQKIMSARAYTAWVTPASGFLLVAGGTYGFLS 231          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A2T1DUY7_9CYAN (Cytochrome C biogenesis protein n=4 Tax=Bacteria TaxID=2 RepID=A0A2T1DUY7_9CYAN)

HSP 1 Score: 111 bits (278), Expect = 8.250e-28
Identity = 66/129 (51.16%), Postives = 92/129 (71.32%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLDTIMT-LPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGLT-WIAPASGAVLISYGTYGALETLYKF 127
            MGLNLLE L L+LPSF GGL+ I   LP+  RA+L+G +  LVASPC TPVLASIL ++++++DPVLG  LLLAY+VGY  PL++AG  + ++ +L+     + WI PASGA+L+ +G +  L  +  F
Sbjct:  117 MGLNLLEALPLRLPSF-GGLEWISKDLPQGVRAYLIGLAFGLVASPCSTPVLASILAWISATKDPVLGSVLLLAYTVGYAAPLVLAGTFTASIKKLLELRRWSGWITPASGALLVGFGVFSLLTRVVSF 244          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A2R6WGN2_MARPO (DsbD domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WGN2_MARPO)

HSP 1 Score: 113 bits (282), Expect = 1.030e-27
Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLD---TIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGLT-WIAPASGAVLISYGTYGALETLY 125
            MGLNLLE++ LQLPSF G  D       LP + +A+L G + AL ASPC TPVLAS+LG+VA+SQDPV+G +LLLAY+ GY  PLL A + +GA+ +LMS    + WI P SGA+L+  G Y  L  ++
Sbjct:  184 MGLNLLEIIELQLPSFFGDFDPKAAAANLPTSVQAYLAGLTFALAASPCSTPVLASLLGYVATSQDPVIGGSLLLAYTCGYVAPLLAAASLAGAIQQLMSLRKYSAWINPTSGALLLGGGLYTFLVRVF 312          
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Match: A0A453KAY5_AEGTS (DsbD domain-containing protein n=4 Tax=Magnoliopsida TaxID=3398 RepID=A0A453KAY5_AEGTS)

HSP 1 Score: 108 bits (269), Expect = 1.150e-27
Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = 0
Query:    1 MGLNLLELLTLQLPSFEGGLD---TIMTLPRTSRAFLLGSSSALVASPCCTPVLASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAGL-TWIAPASGAVLISYGTYGALETLY 125
            MGLNLLE++ LQLPSF    D       LP + +A+L G + AL ASPC TPVLA++LG+VA+S+DP++G +LLL Y+ GY  PLL+A + +GAL  L+S     TWI P SGA L+  G Y  L+ L+
Sbjct:    1 MGLNLLEVVELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSTWINPISGAFLLGGGVYTLLDKLF 129          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YY77_9STRA5.660e-5172.58Cytochrome c biogenesis protein, thiol reduction t... [more]
A0A4D9CLR8_9STRA4.630e-3456.69DsbD domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S2UUE9_9STRA6.400e-3457.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4H6S3_VITBC1.920e-3048.09DsbD domain-containing protein n=1 Tax=Vitrella br... [more]
R1BZD3_EMIHU1.960e-3056.56DsbD domain-containing protein (Fragment) n=2 Tax=... [more]
A0A2P8VTB0_9CYAN2.710e-2947.69Cytochrome C biogenesis protein (Fragment) n=1 Tax... [more]
C1MSL3_MICPC4.980e-2852.42Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A2T1DUY7_9CYAN8.250e-2851.16Cytochrome C biogenesis protein n=4 Tax=Bacteria T... [more]
A0A2R6WGN2_MARPO1.030e-2752.71DsbD domain-containing protein n=1 Tax=Marchantia ... [more]
A0A453KAY5_AEGTS1.150e-2750.39DsbD domain-containing protein n=4 Tax=Magnoliopsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003834Cytochrome C biogenesis protein, transmembrane domainPFAMPF02683DsbDcoord: 1..118
e-value: 1.1E-17
score: 64.7
NoneNo IPR availablePANTHERPTHR31272FAMILY NOT NAMEDcoord: 1..125
NoneNo IPR availablePANTHERPTHR31272:SF6CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEINcoord: 1..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 122..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 99..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7471338..7473370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1080.1mRNA_S-ischiensis_contig1.1080.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7471288..7473530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1080.1 ID=prot_S-ischiensis_contig1.1080.1|Name=mRNA_S-ischiensis_contig1.1080.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=131bp
MGLNLLELLTLQLPSFEGGLDTIMTLPRTSRAFLLGSSSALVASPCCTPV
LASILGFVASSQDPVLGLALLLAYSVGYTTPLLVAGAASGALSRLMSAAG
LTWIAPASGAVLISYGTYGALETLYKFWPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003834Cyt_c_assmbl_TM_dom