prot_S-ischiensis_contig1.1047.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1047.1
Unique Nameprot_S-ischiensis_contig1.1047.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length139
Homology
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: D7FNK9_ECTSI (YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK9_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.940e-37
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 0
Query:    1 MAAERHVYVIMCKDEQ-CGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEATRAEADAFIANDPFSKVGRWVT 101
            M+ E+H+Y I C D+Q CG+A G+PRGGS KR+ NY AHK YQ  TA P  P FINK+SAGP+V+E + YM+GS FLV ATR EA  F+ NDPF K G W T
Sbjct:    1 MSEEKHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKKEGVWST 102          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A835Z4J4_9STRA (YCII-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J4_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.120e-32
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 0
Query:    3 AERHVYVIMCKDEQ-CGRA--VGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEATRAEADAFIANDPFSKVGRWVTAT 103
            A++ +YVI C D+Q CG A    +PR GS KRI  Y  HKAYQ  TA P SP+FI KI+AGPMV +D KYMVGS F+VE TR + +AF  NDPF K G W + T
Sbjct:    2 ADKRLYVITCVDDQSCGPADPPAEPRSGSAKRIGIYAEHKAYQASTADPDSPNFITKITAGPMVTDDGKYMVGSSFIVEGTREQVEAFYKNDPFYKAGVWASIT 105          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: UPI0012EDAA8B (YciI family protein n=1 Tax=Mesorhizobium xinjiangense TaxID=2678685 RepID=UPI0012EDAA8B)

HSP 1 Score: 73.2 bits (178), Expect = 2.620e-14
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    8 YVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEA-TRAEADAFIANDPFSKVGRW 99
            YV+ C D           G   KR+ NYEAHK Y   T+       +  + +GP++ +D + M+GSCF+VEA ++A+ +AF ANDPF+KVG W
Sbjct:    3 YVVHCLDHD---------GAVQKRLDNYEAHKDYLASTS-------MKTVISGPLLADDGETMIGSCFVVEADSKADVEAFNANDPFAKVGLW 79          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: UPI000E0D7DB3 (YciI family protein n=1 Tax=Acidibrevibacterium fodinaquatile TaxID=1969806 RepID=UPI000E0D7DB3)

HSP 1 Score: 67.8 bits (164), Expect = 3.310e-12
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    8 YVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEA-TRAEADAFIANDPFSKVGRWVT 101
            YVI C D +         G   KR+A+YEAHKAY            I  + +GP++ +D + M+GSCF+VEA + AE +AF   DPF  +G W T
Sbjct:    3 YVIHCLDHE---------GAVDKRLAHYEAHKAYLAAAR-------IKTVISGPLLADDERTMIGSCFIVEAESLAEVEAFNREDPFYAIGLWRT 81          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A2G8REM6_9RHOB (YCII domain-containing protein n=5 Tax=Rhodobacterales TaxID=204455 RepID=A0A2G8REM6_9RHOB)

HSP 1 Score: 67.4 bits (163), Expect = 4.670e-12
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 0
Query:    8 YVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEA-TRAEADAFIANDPFSKVGRWVTAT 103
            YVI C D +         G   KR+ANY+AHKAY            +  + +GP++ +D + M+GSCFL+EA + AE +AF  +DPF   G W T +
Sbjct:    3 YVIHCLDYE---------GAVEKRLANYDAHKAYLAAAT-------VKTLVSGPLLADDEETMIGSCFLLEADSLAEVEAFNRDDPFHHAGLWKTVS 83          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A4R3FNG1_9HYPH (YCII domain-containing protein n=4 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A4R3FNG1_9HYPH)

HSP 1 Score: 65.9 bits (159), Expect = 1.860e-11
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    8 YVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEA-TRAEADAFIANDPFSKVGRWVT 101
            YV+ C D +         GG  +R+ANY+AHKAY     T         + +GP++ +DN+ M+GS F+ EA T+ E  AF   DPF+K G W T
Sbjct:    3 YVVHCLDHE---------GGVERRLANYDAHKAYLSTGKT-------KTVISGPLLADDNETMIGSLFVFEADTKEEVVAFNQADPFTKAGVWKT 81          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A4R1RXC6_9HYPH (YCII domain-containing protein n=8 Tax=Rhizobium TaxID=379 RepID=A0A4R1RXC6_9HYPH)

HSP 1 Score: 65.9 bits (159), Expect = 1.860e-11
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    8 YVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEA-TRAEADAFIANDPFSKVGRWVT 101
            Y++ C D +         G   KR+ANY+AHKAY    +T         + +GP++ +DN+ M+GS FL+EA  + E  AF   DPF+K G W T
Sbjct:    3 YIVHCLDHE---------GAVEKRLANYDAHKAYLASAST-------KTVISGPLLADDNETMIGSLFLLEADNKEEVVAFNRADPFTKAGVWKT 81          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A0J6SEC8_9HYPH (YCII domain-containing protein n=5 Tax=Methylobacterium TaxID=407 RepID=A0A0J6SEC8_9HYPH)

HSP 1 Score: 63.9 bits (154), Expect = 1.180e-10
Identity = 35/84 (41.67%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   23 DPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEAT-RAEADAFIANDPFSKVGRWVTATAT 105
            D  G   +R+A+YEAHKAY       G P  +  + +GP++ ED + M+GS F+VEA  RA  +AF A DPF   G W     T
Sbjct:   10 DHAGALERRLAHYEAHKAYL------GGPLPVRIVVSGPLLAEDGETMIGSLFIVEAPDRAAVEAFHAADPFKAAGIWARVEIT 87          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A1B9UZ30_RHIRD (YCII domain-containing protein n=10 Tax=Rhizobiaceae TaxID=82115 RepID=A0A1B9UZ30_RHIRD)

HSP 1 Score: 62.0 bits (149), Expect = 6.090e-10
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   23 DPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEATRAEADA-FIANDPFSKVGRW 99
            D + G  KR+ANY+AHKAY       G P  +  + +GP+V +D + M+GS F+ EA + +    F ANDPF+K   W
Sbjct:    9 DHKDGLPKRLANYDAHKAYL------GGPGPVGTVISGPLVADDGETMIGSLFVFEAEKKQDVVDFNANDPFTKANVW 80          
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Match: A0A1D7ZU82_9BURK (YCII domain-containing protein n=5 Tax=Burkholderia TaxID=32008 RepID=A0A1D7ZU82_9BURK)

HSP 1 Score: 61.6 bits (148), Expect = 8.390e-10
Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 0
Query:    8 YVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGSPHFINKISAGPMVEEDNKYMVGSCFLVEATRAE-ADAFIANDPFSKVGRW 99
            +V+ C D +         G   +R+ANYEAHKAY            +  I +GP+V ++ + M+GS FLVEA R E   AF  NDPFS    W
Sbjct:    3 FVVHCVDRE---------GALERRLANYEAHKAYLASAK-------VRSIISGPLVSDEGETMIGSFFLVEAERKEDVIAFNRNDPFSAADVW 79          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNK9_ECTSI3.940e-3759.80YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835Z4J4_9STRA2.120e-3256.73YCII-related n=1 Tax=Tribonema minus TaxID=303371 ... [more]
UPI0012EDAA8B2.620e-1440.86YciI family protein n=1 Tax=Mesorhizobium xinjiang... [more]
UPI000E0D7DB33.310e-1240.00YciI family protein n=1 Tax=Acidibrevibacterium fo... [more]
A0A2G8REM6_9RHOB4.670e-1238.14YCII domain-containing protein n=5 Tax=Rhodobacter... [more]
A0A4R3FNG1_9HYPH1.860e-1138.95YCII domain-containing protein n=4 Tax=Rhizobium/A... [more]
A0A4R1RXC6_9HYPH1.860e-1137.89YCII domain-containing protein n=8 Tax=Rhizobium T... [more]
A0A0J6SEC8_9HYPH1.180e-1041.67YCII domain-containing protein n=5 Tax=Methylobact... [more]
A0A1B9UZ30_RHIRD6.090e-1041.03YCII domain-containing protein n=10 Tax=Rhizobiace... [more]
A0A1D7ZU82_9BURK8.390e-1038.71YCII domain-containing protein n=5 Tax=Burkholderi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.1060coord: 7..105
e-value: 1.6E-9
score: 39.7
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 8..97
e-value: 1.0E-4
score: 22.6
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 30..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7233314..7234041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1047.1mRNA_S-ischiensis_contig1.1047.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7233279..7235052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1047.1 ID=prot_S-ischiensis_contig1.1047.1|Name=mRNA_S-ischiensis_contig1.1047.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=139bp
MAAERHVYVIMCKDEQCGRAVGDPRGGSVKRIANYEAHKAYQKETATPGS
PHFINKISAGPMVEEDNKYMVGSCFLVEATRAEADAFIANDPFSKVGRWV
TATATLPLLSCRPRGSVVVGQGYSRGSFSPARWSKAEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005545YCII
IPR011008Dimeric_a/b-barrel