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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 2 |
| Model size | 829 |
| Cds size | 759 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817420.345518-UTR-S-ischiensis_contig93:44322..44339 | 1622817420.345518-UTR-S-ischiensis_contig93:44322..44339 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig93 44323..44339 - |
| 1695741101.7382743-UTR-S-ischiensis_contig93:44322..44339 | 1695741101.7382743-UTR-S-ischiensis_contig93:44322..44339 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig93 44323..44339 - |
| 1622817420.382934-UTR-S-ischiensis_contig93:47097..47150 | 1622817420.382934-UTR-S-ischiensis_contig93:47097..47150 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig93 47098..47150 - |
| 1695741101.7695334-UTR-S-ischiensis_contig93:47097..47150 | 1695741101.7695334-UTR-S-ischiensis_contig93:47097..47150 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig93 47098..47150 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817420.3559694-CDS-S-ischiensis_contig93:44339..44627 | 1622817420.3559694-CDS-S-ischiensis_contig93:44339..44627 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig93 44340..44627 - |
| 1695741101.7503242-CDS-S-ischiensis_contig93:44339..44627 | 1695741101.7503242-CDS-S-ischiensis_contig93:44339..44627 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig93 44340..44627 - |
| 1622817420.369203-CDS-S-ischiensis_contig93:46626..47097 | 1622817420.369203-CDS-S-ischiensis_contig93:46626..47097 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig93 46627..47097 - |
| 1695741101.7596066-CDS-S-ischiensis_contig93:46626..47097 | 1695741101.7596066-CDS-S-ischiensis_contig93:46626..47097 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig93 46627..47097 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig93.20961.1 >prot_S-ischiensis_contig93.20961.1 ID=prot_S-ischiensis_contig93.20961.1|Name=mRNA_S-ischiensis_contig93.20961.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=253bp
MESRRPNDRRGGAPQSTVGGRGAARSLDFDPQAFLNIGSWLAVTDRRQTS
TSVGVQCDTPEAPPRPLLPRALVTGCIFALLALSGYLWGEARAWQGKHAE
LRREFEILASAHSRGGALPPTPPKDGTDLCFGGGGRAGGEDIISTCWVKV
QLGECGKDLLLDPLKLVAGAWHDLEASFWETWSILGSAMTHACHDFSGNT
GEEDGREEEGDTSAWTGKNHAAATAAAARQPSLFHGVAKALERGFAHSRF
GS* back to topmRNA from alignment at S-ischiensis_contig93:44323..47150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig93.20961.1 ID=mRNA_S-ischiensis_contig93.20961.1|Name=mRNA_S-ischiensis_contig93.20961.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2828bp|location=Sequence derived from alignment at S-ischiensis_contig93:44323..47150- (Schizocladia ischiensis KU_0333)
GTGTCGCCGTGTCCAGCGCGACGCACCGTCCCGGCTTGGCACGGATCTGG
CCCATGGAGTCCCGCCGACCAAATGATCGCCGGGGAGGTGCACCGCAGTC
GACGGTGGGAGGGAGAGGCGCGGCCCGCTCTCTCGATTTCGACCCGCAGG
CTTTTCTCAATATCGGATCCTGGCTGGCGGTCACCGATCGCCGGCAGACT
TCTACCTCGGTGGGGGTGCAGTGCGACACCCCGGAGGCACCGCCACGGCC
ATTGCTGCCCCGTGCGCTGGTCACCGGCTGCATCTTCGCGCTCCTCGCGC
TGAGCGGCTACCTCTGGGGGGAGGCGCGGGCATGGCAAGGGAAACATGCG
GAGCTGCGCAGGGAGTTTGAGATTCTGGCTTCCGCCCATTCCCGGGGGGG
GGCGTTGCCCCCCACGCCACCGAAAGACGGCACAGACCTCTGCTTTGGTG
GTGGTGGGCGTGCGGGTGGCGAGGACATCATCAGCACGTGCTGGGTCAAG
GTGCAGCTGGGCGAATGCGGCAAGGTACGCACAAGAGACTTCCCTTCCCC
GCCCCTTCCCTTTCCAAGCCCCGTCCGTTTCCTTCTGTATTGTTTGTGTT
CTTCTTGCCCTGCGAGGGAAGGAAGCGCTTCCGTTGAGTCCTGTTTTGGG
GCGAGCCTTTTGGCACGGGGCCTGGAACTCGCCGCTTATCTACCACTTAA
AGCAAGCTACGTCATGCCCTCCTTTTCAGTGATCAACTACTATGTTTGAG
GGGACGTGGACTCTTTCTTGGGGGCAGAAGAAACGGCTAACGGGGCCACA
ATATCAATCTCTGGTTTTCGGCAGATGTCAGTACTTGCTGCCCGGCCAAG
GGTATTCCGTGTGTGAAGCAATGATGCAAACTTTGGGCTAACAAGTGTCT
AATTCATGTCGTCGCACCCGTGGGCGCACCTCCTTATTCCAAAGCCGCCT
CTGGATCCTACCTGAACGTGAAATGACCGTGCGTCCACGATTGAACCCGA
TTAGCCCCTGCCGTGTACTGCAAGCCACCCGTTCGGGCTTGGATTTGAGC
TTGGAGGGTTGCATCAGGGTGCTTCCTACACACACATGAAGAGCCACCCG
TATGAACTATGCGTGTGTTGCCAGTGGCAATGCTGACGTCTTGTTTGTGT
TCTCATTCGTACTGAGGAAGATGTGCTTGGGACCCCACTTTGTGGTAGTG
GCCCTGCCCATTTGTGGGCCGACATGGGTGTTTCACGGTGGAGGACACCG
TATGATCACACAAAGTTAATACAAGAACACTCAGTCTCACACACGTGCGA
TTGTACCTTGTTGCAATTCTGTGAATTATTGGTACAATTTATACTTCGTA
TGAATCACAGCACACGATTGCCTGTCCTTTTCCGCGAGACCCGGATTGCA
CACACACACAAGTGCAAACGAAATCGTGGTCATTGCACACTGCTGCGTCA
GCAGTGGCAGTGGCAGTGGCCCGGTGAGTTGACCTTCCCATACAATCCGG
GCTGCGTTCATGAAAGGGCCCACGTTCTTGCTTGCTTTGCGCCTCGCTTC
GGTGGGCTTGTTTCATTATTGGAATATGCTCCACAGTGCAAGGCTAGCCC
AAGCACGTGTTATTGTAGAGCGTTTTCTTTACTATCCATAATCCACAAAA
GGCGAACACAAGCACCCCACACAACAAGTGTCCCTGAACGTACGGTCCAG
GGTAAGTAAGTAGAGGCACCTGTCATTCCCACTCGCTTCTTTCCTCTGCT
CAAAAACGACCATCAGATATTGTCCAACCCGTGACCTCGGCAGCAGAGGC
CAAATCCGCAGGGCTACAACAACAAAACCTAGCCGTCCCTAGTAATCTAT
CCCTACGATAGTAATCTATCCCACACAGGGTTGGCACTTAACCCCTACAG
CAAGTGGTGCCCTTCTAGGCCCTTAATTAGAGATAATTAGGGGTAACAAG
ACCTACAATGAAGGCTAGCTAGGCCCTAGTTATCCTCTAAGTGCCAACCC
TGATCCCACACCTTGGGTTTCTTGAGGCCCCTGGCGACGATTTCCTTGAG
GCTTTCTTCCATGGAGAGGCTGTTGAAGTCTGATTTTCTTTCTGCGGATT
TTCCCCGACGCCTCTTGCATTGAACACCCGGCCACCCGCTAAGTGCATAG
CCTAGCTATTGATGCGGTTGACCCACCCGTCCCTACCCGTGCAGTTCTAG
TGCTCGAGTACAGTACTGTAGTAGTAGTGGGCCGTTTGGGTGGAAAAGGC
CCGGTTTGCGCCGGCCAGGCACGCTCGACCACCCACAATCACTAACATAA
GAACACACGATTTTTTTAATGGGACAACTACTACTACGAGCACATTCAAT
CTATCACACGTGCGATTGCACCTCGTTGCCATTTATTTGAGTGGTAGATA
AGCGGCGAGTTCCAGGCCCCGTGCCAAAAAGGCTCGTCCCAACACAGGAA
TCAACACTCGTTACAATTTAAATGAATCAACACCTATTTGGCGCTTGCAA
ACCAACGCCTTCCACGTGTGCAGGACCTCCTGTTGGACCCCCTGAAGCTG
GTCGCCGGTGCCTGGCACGACCTGGAGGCGTCTTTCTGGGAGACCTGGTC
CATCTTGGGCTCCGCCATGACGCACGCCTGCCACGACTTCTCCGGCAACA
CTGGCGAGGAGGACGGGCGGGAGGAGGAAGGAGACACGTCTGCGTGGACC
GGCAAAAACCACGCCGCTGCCACCGCCGCCGCCGCCAGGCAGCCTTCCTT
GTTTCACGGCGTTGCCAAGGCCTTGGAGCGGGGCTTTGCTCACTCTCGCT
TTGGCTCTTGAGTTGGGCTTCCGCAGAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig93:44323..47150- >mRNA_S-ischiensis_contig93.20961.1 ID=mRNA_S-ischiensis_contig93.20961.1|Name=mRNA_S-ischiensis_contig93.20961.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1518bp|location=Sequence derived from alignment at S-ischiensis_contig93:44323..47150- (Schizocladia ischiensis KU_0333)
ATGGAGTCCCGCCGACCAAATGATCGCCGGGGAGGTGCACCGCAGTCGAC
GGTGGGAGGGAGAGGCGCGGCCCGCTCTCTCGATTTCGACCCGCAGGCTT
TTCTCAATATCGGATCCTGGCTGGCGGTCACCGATCGCCGGCAGACTTCT
ACCTCGGTGGGGGTGCAGTGCGACACCCCGGAGGCACCGCCACGGCCATT
GCTGCCCCGTGCGCTGGTCACCGGCTGCATCTTCGCGCTCCTCGCGCTGA
GCGGCTACCTCTGGGGGGAGGCGCGGGCATGGCAAGGGAAACATGCGGAG
CTGCGCAGGGAGTTTGAGATTCTGGCTTCCGCCCATTCCCGGGGGGGGGC
GTTGCCCCCCACGCCACCGAAAGACGGCACAGACCTCTGCTTTGGTGGTG
GTGGGCGTGCGGGTGGCGAGGACATCATCAGCACGTGCTGGGTCAAGGTG
CAGCTGGGCGAATGCGGCAAGATGGAGTCCCGCCGACCAAATGATCGCCG
GGGAGGTGCACCGCAGTCGACGGTGGGAGGGAGAGGCGCGGCCCGCTCTC
TCGATTTCGACCCGCAGGCTTTTCTCAATATCGGATCCTGGCTGGCGGTC
ACCGATCGCCGGCAGACTTCTACCTCGGTGGGGGTGCAGTGCGACACCCC
GGAGGCACCGCCACGGCCATTGCTGCCCCGTGCGCTGGTCACCGGCTGCA
TCTTCGCGCTCCTCGCGCTGAGCGGCTACCTCTGGGGGGAGGCGCGGGCA
TGGCAAGGGAAACATGCGGAGCTGCGCAGGGAGTTTGAGATTCTGGCTTC
CGCCCATTCCCGGGGGGGGGCGTTGCCCCCCACGCCACCGAAAGACGGCA
CAGACCTCTGCTTTGGTGGTGGTGGGCGTGCGGGTGGCGAGGACATCATC
AGCACGTGCTGGGTCAAGGTGCAGCTGGGCGAATGCGGCAAGGACCTCCT
GTTGGACCCCCTGAAGCTGGTCGCCGGTGCCTGGCACGACCTGGAGGCGT
CTTTCTGGGAGACCTGGTCCATCTTGGGCTCCGCCATGACGCACGCCTGC
CACGACTTCTCCGGCAACACTGGCGAGGAGGACGGGCGGGAGGAGGAAGG
AGACACGTCTGCGTGGACCGGCAAAAACCACGCCGCTGCCACCGCCGCCG
CCGCCAGGCAGCCTTCCTTGTTTCACGGCGTTGCCAAGGCCTTGGAGCGG
GGCTTTGCTCACTCTCGCTTTGGCTCTTGAGACCTCCTGTTGGACCCCCT
GAAGCTGGTCGCCGGTGCCTGGCACGACCTGGAGGCGTCTTTCTGGGAGA
CCTGGTCCATCTTGGGCTCCGCCATGACGCACGCCTGCCACGACTTCTCC
GGCAACACTGGCGAGGAGGACGGGCGGGAGGAGGAAGGAGACACGTCTGC
GTGGACCGGCAAAAACCACGCCGCTGCCACCGCCGCCGCCGCCAGGCAGC
CTTCCTTGTTTCACGGCGTTGCCAAGGCCTTGGAGCGGGGCTTTGCTCAC
TCTCGCTTTGGCTCTTGA back to top
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