mRNA_S-ischiensis_contig91.20919.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A6H5JQ06_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ06_9PHAE) HSP 1 Score: 209 bits (532), Expect = 6.380e-55 Identity = 126/278 (45.32%), Postives = 166/278 (59.71%), Query Frame = 2
Query: 1199 KKILDAKKRGHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDE-PTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRG-GRXXXXXXFGGPGFH--VYSTGPFAGMNGGARRQAAGREDGRQQNGWQMLQMLPIVLMLLYSLLSLPNSEPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQARRAR 2020
K++L +KK+GHY+VLGV KGA++D++KKAYRKLAL+ HPDKNGAP + EAF+AIG AFAVLSD +KR++YD+YGDD+ P +G G PF R EVS EDIFNMFFG PPG RR GR G P F+ VY G GG R G G +L +L ++++ +L E F L Y+ + TTQ++GVV GIDY+V F + Y + +LR+VE AVT Y+ L CN RQ+ Q+ + QA A+
Sbjct: 160 KQVLTSKKKGHYDVLGVEKGANDDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFAVLSDGDKRAHYDRYGDDDGPQGIG----GGQGGGPFGRGHHYGAEVSPEDIFNMFFGQPPGARRRQGRG------GMPSFNTRVYRAG------GGVDRGGGGGNGQEGATGMNLLPLLGAIVLMFLTLFGGEQQEAAFSLERTSAYKIPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRRVEVAVTEQYKTNLILNCNYSRQKNQARVAQASEAK 421
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A7S2DVK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DVK4_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.730e-52 Identity = 117/265 (44.15%), Postives = 155/265 (58.49%), Query Frame = 2
Query: 1199 KKILDAKKRGHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRGGRXXXXXXFGGPGFHVYSTGPFAGMNGGARRQAAGREDGRQQNG-WQMLQMLPIVLMLLYSLLSLPN--SEPPFQLRPAGNYRHLRRTTQQR-GVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQ 1981
K+I+ A K+GHY VLGV K A+ED VKKAY+KLALK HPDKN AP ++ AFKA+ A++VLSD EK+ +YD YG D+P+ R+ +++ EDIFNMFFG GG G F Y P RRQ R+ QNG +Q+LQM P++L+LL S S P+ +PPF L AG+Y H R T+Q R G GI+Y+V NF ++YGRD QL VE+AVT + + L+ +C Q+Q
Sbjct: 98 KQIIAAGKKGHYEVLGVGKDATEDAVKKAYKKLALKLHPDKNSAPEAESAFKAVSMAYSVLSDSEKKRHYDLYGSDDPSXXXX--------XXMRRQYSDPSDINPEDIFNMFFG---GGAAFGNHGQ--------FRAYRQHPMQ------RRQEGQRQGEAPQNGAFQLLQMAPLILLLLMSFFSYPSVSQDPPFSLNRAGSYTHKRSTSQSRYGARQGIEYWVKENFSRTYGRDRYQLSSVEQAVTQQFHDELKYQCQVQKQ 337
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: F0YIU4_AURAN (J domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIU4_AURAN) HSP 1 Score: 192 bits (489), Expect = 4.560e-50 Identity = 116/279 (41.58%), Postives = 154/279 (55.20%), Query Frame = 2
Query: 1199 KKILDAKKRGHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPG-GRRGGRXXXXXXFGGPGFHVYSTGPFAGMNGGARRQAAGREDGRQQNGWQMLQMLPIVLMLLYSLLSLPN--SEPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQARRARPR 2026
++IL K RGHY VLGV+K A +DE+KKAYRKLALKFHPDKN AP +DEAFK +G A+AVLSD EKR++YD+YGD++ ++S EDIFNMFFGV PG GRR GP AR R Q+LQ+LP++L+ S S PN +E PF L G Y + R T+ RGV I Y+V F Y RDP L +++++V S++ LR C Q+++++ L++QAR R R
Sbjct: 101 RQILRLKNRGHYEVLGVSKSAGDDEIKKAYRKLALKFHPDKNRAPMADEAFKCVGLAYAVLSDGEKRASYDRYGDEDAAPQXXXXXXXXXXXXXXX------DISPEDIFNMFFGVDPGRGRR------------------QAGP-------ARAYPQARRQPPPNQAQQLLQLLPLLLLFALSFFSYPNQYAESPFSLERKGKYT-VERFTKSRGVTRDIRYWVGDGFSAKYARDPYSLARIDQSVESEFETNLRYGCYNQKEQQRRLVYQARLKRTR 347
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: D8LBV6_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV6_ECTSI) HSP 1 Score: 189 bits (479), Expect = 1.650e-48 Identity = 127/315 (40.32%), Postives = 169/315 (53.65%), Query Frame = 2
Query: 1199 KKILDAKKRGHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGD-DEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRG-GRXXXXXXFGGPGFH--VYSTGPFAGMNGGARRQAAGREDGRQQNGWQMLQMLPIVLMLLYSLLSLPNSEPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQARRARPRGFSGATEEGTAAEREAQASPTPACEELVTKFASVS 2131
K++L++K +GHY+VLG+ KGA++D++KKAYRKLAL+ HPDKNGAP + EAF+AIG AFAVLSD +KR++YD+YGD D P +G G PF R EVS EDIFNMFFG PPG RR GR G P F+ VY G GG R G G +L +L ++++ +L E F L Y+ + TTQ++GVV GIDY+V F + Y + +LR+ ++ R + SE Q LI E + +P PACEEL KF+S S
Sbjct: 129 KQVLNSKAKGHYDVLGIEKGANDDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFAVLSDADKRAHYDRYGDGDGPQGIG----GGQGGGPFGRGHHYGAEVSPEDIFNMFFGQPPGARRRQGRG------GMPSFNTRVYRAG------GGVDRGGGGGNGQEGAMGMNLLPLLGAIVLMFLTLFGGEQQEAAFSLERTSAYKVPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRRAKRK-----RRTMDSEAYDQ------LIL----------------------EMETTPLPACEELAVKFSSHS 394
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A7S2SSK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSK5_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.930e-46 Identity = 114/277 (41.16%), Postives = 158/277 (57.04%), Query Frame = 2
Query: 1199 KKILDAKKRGHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRGGRXXXXXXFGGPGFHVYSTG-PFAGMNGGARRQAAGREDGRQQNG-WQMLQMLPIVLMLLYSLLSLPNS-EPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQARRAR 2020
++I+ A+ +GHY+VLGV A++DE+KKAYRKLALK HPDKN AP ++ AFKA+ A+ VLSD EKR YD YG D+PT HRR D ++ EDIFNMFFG GG + GPGF VY +G P + G ++Q + + G Q+LQ+ PI L L+ S+ S E PF L+ +G Y R T RG+ GI+Y+V +F K+YGR QL VE V + + LR EC +Q +++ + +A+ +R
Sbjct: 102 RRIMAAQAKGHYDVLGVGTKATDDEIKKAYRKLALKLHPDKNSAPGAEGAFKAVSMAYTVLSDSEKRRTYDLYGSDDPTNPSXXXXXX---XXMHRRYAEQD-INPEDIFNMFFGGGMGGFHHAQ--------GPGFRVYRSGFPPRRQHPGGQQQXXXXXEAQGSAGLMQLLQLAPIFLFLVTSMFFPSGSYESPFSLQRSGGYAIQRATQDSRGIRGGIEYFVKESFAKNYGRTRRQLASVEGQVQQAFHDELRYECTQQHHQQRLAMNRAKFSR 366
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A7S2UNV9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNV9_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.520e-45 Identity = 127/282 (45.04%), Postives = 165/282 (58.51%), Query Frame = 2
Query: 1199 KKILDAKKRG----HYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPF---HRRGGGADEVSAEDIFNMFFGVPPGGRRGGRXXXXXXFGGPGFHVYSTGPFAGMNGGARRQAAGREDGRQQNGW--QMLQMLPIVLMLLYSLLSLPNSEPP-------FQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSL 1996
K +LDA+K+G HY VLGVA ASE E+KKAYRKLALK HPDKN AP +DEAFKA+G A+ LSD +KR+ YD+YGD++P G H R G EV+ EDIFNMFFG G XXXXXX GGPGF VY+ G AG GGA+RQ A + ++ G ++Q+LP++++LL S ++ ++ F L A Y H T + V I YYV +S+ RD QL QVE+ V + Y + L +EC Q+Q K+SL
Sbjct: 122 KTVLDAQKKGGRGTHYRVLGVASSASESELKKAYRKLALKLHPDKNSAPLADEAFKAVGMAYGTLSDPQKRTIYDRYGDEDPDTSGXXXXXXXXXXXXXGVHFRPG--QEVNPEDIFNMFFG-------GXXXXXXXXXGGPGFRVYTNG--AGFGGGAQRQRAQAQQPQEAAGGFASIVQLLPLIILLLLSFFNMGDNGTSATGGSSYFSLTHAPPYVHP--LTTRLATVKDIPYYVTDKGMRSFARDRYQLSQVERMVETAYEKYLVTECKSQQQYKRSL 390
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A4D9D2B9_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2B9_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.040e-43 Identity = 113/278 (40.65%), Postives = 155/278 (55.76%), Query Frame = 2
Query: 1199 KKILDAKKRGHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRGGRXXXXXXFGGPGFHVYST-----GPFAGMNGGARRQAAGREDGRQQNGWQMLQMLPIVLMLLYSLLSLPN-SEPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQARR 2014
+ I+ +KK+GHY VL V++ A++D++KK+YRKLALKFHPDKN AP +DEAFKAI AF VLSD +KR +YDQ+GDD+ T+ G+ +A PF +VS E+IFNMFFGV GGR F VY + PF G+ Q+LQ+LP++L+L SL S P SE F L + L+R+T ++ I Y+V +F + Y RD +L QVE+ V Y L+ +C Q+Q K + ARR
Sbjct: 115 RTIIQSKKKGHYEVLSVSRTATDDQIKKSYRKLALKFHPDKNAAPQADEAFKAISTAFQVLSDPDKRRSYDQFGDDDGTE-GMGGQAH----PFRHA-----DVSPEEIFNMFFGVNGGGRPAN------------FRVYRSHHDQRNPFFRYQQXXXXXXXGQAQPPLGALPQVLQLLPVLLLLFLSLFSFPQESERAFSLHRTDRHP-LQRSTSMEHILPNIPYFVGQSFGRDYARDRRRLFQVEREVQQSYLYDLQRQCEGQKQNKVRRVQAARR 369
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A835ZD03_9STRA (DnaJ subfamily B protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD03_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.130e-43 Identity = 109/250 (43.60%), Postives = 157/250 (62.80%), Query Frame = 2
Query: 1226 GHYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRGGRXXXXXXFGGPGFHVYSTGPFAGMNGGARRQAAGREDGRQQNGWQMLQMLPIVLMLLYSLLSLPNS-EPPFQLRPAGNYRHLRRT-TQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECN 1969
GHY VL + K A++D++K++YRKLALKFHPDKNGAPH+ EAFKAIG AFAVLSD +KR+ YD+YGDDEP GL GM G EVS EDIFNMFFG GG G R + G G+H + +A + AR A R+ G +++ W ++QMLP++LM+++SL++ S E ++L Y R T +Q + V G+ Y+V +F + + Q+ QVE+AVT+ + ++++ +C+
Sbjct: 103 GHYEVLCIEKTATDDDIKRSYRKLALKFHPDKNGAPHAPEAFKAIGHAFAVLSDPDKRAAYDRYGDDEPAN-GL--NGGGGGMHGGWANGRGAEVSPEDIFNMFFGQMAGG--GMRAGGFRTYHG-GYHNHPM--YARPHPAAR---AARDGGGERSWWGLVQMLPMLLMMVFSLMNFGGSGEAVYRLEKTPVYSQPRYTRSQAQNVKQGLPYFVKTDFLHQH-KHRTQIYQVEQAVTARHLQIMQEQCS 340
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A1Z5JNK6_FISSO (DnaJ homolog subfamily B member 12 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNK6_FISSO) HSP 1 Score: 175 bits (444), Expect = 1.230e-43 Identity = 119/294 (40.48%), Postives = 164/294 (55.78%), Query Frame = 2
Query: 1199 KKILDAKKRG---HYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQVGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVP-PGGRRGGRXXXXXXFGGPGFHVYSTG------PFAGMNGGARRQAAGREDGRQQNGW--QMLQMLPIVLMLLYSLLS------------LPNSEPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQA 2008
+++L +K+ G HY VL +++G SE E+KKAYRKL+LK HPDKN AP++DEAFKA+G A+A LSD +KR+ YD+YGD++P G A GM H RG EVS E+IFNMFFG PG RGG PGFHVY++G PF N G RRQA +E +Q + + Q +P++L+L + +P F L + +L +T Q V I +YV NF ++Y ++ QLR+VE+ V Y + L EC +QR K+ L A
Sbjct: 108 EEVLRSKEGGRGAHYRVLKLSQGCSEAEIKKAYRKLSLKVHPDKNSAPNADEAFKAVGLAYATLSDPQKRTIYDRYGDEDPDNRGA---ARGGGMNMHHRG---QEVSPEEIFNMFFGGGMPGMHRGG----------PGFHVYTSGFGPGGMPF--RNAGPRRQARPQEREERQASFLSALFQFMPLLLILFSTFFRSDGSSSASMSGRMPGEGQHFNLVRKPPFVNLMKT--QTTKVRDIPFYVTTNFARTYAQNNYQLRRVEQMVEVAYEQYLIEECTKQRNYKKRLQLNA 381
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Match: A0A7S2PL89_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PL89_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.440e-43 Identity = 123/298 (41.28%), Postives = 161/298 (54.03%), Query Frame = 2
Query: 1199 KKILDAKKRG----HYNVLGVAKGASEDEVKKAYRKLALKFHPDKNGAPHSDEAFKAIGAAFAVLSDKEKRSNYDQYGDDEPTQ----VGLWARASTAGMPFHRRGGGADEVSAEDIFNMFFGVPPGGRRGGRXXXXXXFGGPGFHVYSTGPFAGMNGGARRQAAG--REDGRQQNGW----------QMLQMLPIVLMLLYSLLSLPN-------SEPPFQLRPAGNYRHLRRTTQQRGVVHGIDYYVNANFDKSYGRDPNQLRQVEKAVTSDYRELLRSECNRQRQRKQSLIFQAR 2011
K IL K+ G HY +LGV++ A+E+E+KKAYRKLALK HPDKN AP++DEAFK +G A+ LSD +KR YDQ+GD++P Q +G RA HR EVS EDIFNMFFG GG +GGR GGPGF VY TG F GG QA G ++ R Q QM Q LPI+L L S ++LP+ ++ F L + + R T + V I Y+V F + YGRD QL QVE+ V Y L EC +++ + ++ A+
Sbjct: 126 KDILAIKRSGGRKMHYKILGVSENANENELKKAYRKLALKLHPDKNSAPNADEAFKLVGLAYGTLSDPQKRQIYDQFGDEDPDQNSGGMGGMHRA-------HRTHFNGQEVSPEDIFNMFFG---GGMQGGRGGG---MGGPGFRVY-TGGFG--PGGFGFQAGGFPQQHARGQQXXXXXXXXXXFQQMAQFLPIILFFLLSFVNLPDDASSGGGNKQYFSLTKEAPFLNARYTNLVK--VRDIPYFVTDKFMRVYGRDKYQLAQVERMVEKSYENYLTGECRAEKKHRDKMVHNAK 405 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig91.20919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig91.20919.1 >prot_S-ischiensis_contig91.20919.1 ID=prot_S-ischiensis_contig91.20919.1|Name=mRNA_S-ischiensis_contig91.20919.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=225bp MPFHRRGGGADEVSAEDIFNMFFGVPPGGRRGGRGGMRGGFGGPGFHVYSback to top mRNA from alignment at S-ischiensis_contig91:369999..380164- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig91.20919.1 ID=mRNA_S-ischiensis_contig91.20919.1|Name=mRNA_S-ischiensis_contig91.20919.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=10166bp|location=Sequence derived from alignment at S-ischiensis_contig91:369999..380164- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig91:369999..380164- >mRNA_S-ischiensis_contig91.20919.1 ID=mRNA_S-ischiensis_contig91.20919.1|Name=mRNA_S-ischiensis_contig91.20919.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1350bp|location=Sequence derived from alignment at S-ischiensis_contig91:369999..380164- (Schizocladia ischiensis KU_0333)back to top |