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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 360 |
| Cds size | 198 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817407.288747-UTR-S-ischiensis_contig90:199704..199800 | 1622817407.288747-UTR-S-ischiensis_contig90:199704..199800 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig90 199705..199800 + |
| 1695741091.7520902-UTR-S-ischiensis_contig90:199704..199800 | 1695741091.7520902-UTR-S-ischiensis_contig90:199704..199800 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig90 199705..199800 + |
| 1622817407.300176-UTR-S-ischiensis_contig90:202118..202183 | 1622817407.300176-UTR-S-ischiensis_contig90:202118..202183 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig90 202119..202183 + |
| 1695741091.7607417-UTR-S-ischiensis_contig90:202118..202183 | 1695741091.7607417-UTR-S-ischiensis_contig90:202118..202183 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig90 202119..202183 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817407.317328-CDS-S-ischiensis_contig90:202183..202211 | 1622817407.317328-CDS-S-ischiensis_contig90:202183..202211 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig90 202184..202211 + |
| 1695741091.7698572-CDS-S-ischiensis_contig90:202183..202211 | 1695741091.7698572-CDS-S-ischiensis_contig90:202183..202211 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig90 202184..202211 + |
| 1622817407.328391-CDS-S-ischiensis_contig90:203188..203358 | 1622817407.328391-CDS-S-ischiensis_contig90:203188..203358 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig90 203189..203358 + |
| 1695741091.781917-CDS-S-ischiensis_contig90:203188..203358 | 1695741091.781917-CDS-S-ischiensis_contig90:203188..203358 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig90 203189..203358 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig90.20859.1 >prot_S-ischiensis_contig90.20859.1 ID=prot_S-ischiensis_contig90.20859.1|Name=mRNA_S-ischiensis_contig90.20859.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=66bp
MSDSQGFSAGDFGQSDSFGDGYGLGNAYADMYGYGGYGAFAGYSDGQVPP
WLEFAQAYTDVTKTDK back to topmRNA from alignment at S-ischiensis_contig90:199705..203358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig90.20859.1 ID=mRNA_S-ischiensis_contig90.20859.1|Name=mRNA_S-ischiensis_contig90.20859.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3654bp|location=Sequence derived from alignment at S-ischiensis_contig90:199705..203358+ (Schizocladia ischiensis KU_0333)
CTTGACTGTACCCTGCTTACCGCGAAAATGGACAGCACAACCGGACGGAG
AGGTTGGAACGGCGACGCGTGGTGGTCTGTGGAACGTCGTGAACAGGTGA
GAGCTGTTGCGTCCCCCAGCCGGGCCCCACTCGGCAGTTCGCGAGACTAT
TTGAATTCTGGGCCCCGGCCCGACTTGAGGAGCGCGATGCCGTTTGACGT
TGCGGGTACCTCTAGGGCCGTTCCGGGTAGGTAGGTAGGTGACTGCAGGG
GGGAGAGGGGTCAGGAAACGATGTTCCGAGAGTTTGGTGGTGTACTACCT
TGCATGTGGTGCGATGCCACGGGCAATCTGGCTATATACCCCACGCCCCC
CCCGGCGAGAGGCAAGTGCATACGGTACGTCGAAAAAATGCATGGATGAG
TGCATGCCCCCTCACACGCACGATTCCCCTCCCCAGGGGGACTGAAACTC
ACACAGGGTCTCTCTTGTGGCGAGACTTTTGAACTTTGGAGGAGCTACGA
ACAAGCAGTTCTTCTCAAGGTACTTGTATTGCAACTGCAGTGCTTGACTG
CAACAGTGCTTATCTGCTACCAGACACGGTGCAGGGGCTGAAGAGGCTGC
AGCGCAGTAAGCTCGCTTAGGTTGGTGTATCGTCCTCCTCTAGGGTATAC
ACGACACTGACCAGTCAGGGCCCACAGATTGATTTCGCCCACAGATCGAT
TTGGCCTCGAAAACCGACCCCGGCGCAAGGCCAGTAGGTGTCCGCAACAT
TTTTGCAACATGCACGGGGTGTCAGTGCAGCAGGGCTGCAGGCAAATCAC
ATGGCGCACGCACCCCGAGCATGGAATATCGACCCCGCGCGAGCAGTGTC
CACCTCTTGGTCGGCGATGAATAGAACCAGTGATGGAACATCTAAGCAAA
TCAACCTGTATATCGACAGTACTGATCTATTACTATATATCTATCGATAG
TCGATATTCGATAGTTTGACCCACACTAAATGCAAGTAGTTAGTAACGCC
ACACACAAAATCTGTCGAGCCCGATAACTATCTATGATCGATATTCCATC
ACTGAATAGAACCATCTGCAAACAAAAGTGCAAGCCCTTTTGTGTATTTT
GGCACCGTTGGTAGCGTCAGGGTTGGCATTTAACCCCTAAGCAGAGGTTC
CCTTTTAGGCCCTTAAAAATGGAATTAATTGGGGGTAATTAGGCCTAAAA
TGAAGGCTATTTCGGCCCTAGCTAGCCTCCAAGTGCCAACCCTGCCGTTG
GCAACGTCCCGTAGCAGCGGGTCGGTGCGCAATGCCGGCTCGGGCTTATA
GAGGAGGGGGGGTGCGGGCACGTGCTCCCATGTTATGTCCCCCGTCTAGA
ATACCTCCCGCTGCCCATTGAAGGCCGGGGGGGGGCAGGGCAGTGTTGTC
TTCTTGCATTGTAGCCTGGCTCTCACCACTTGTTGCATTGTGACCCGTCC
CTGTGCGGGCAAAAGCTTATCGGCCGCCGAGGACAGAGGCAGCGAGTTCC
AAAGGTTTAGGTACAAGGTTGTACAACCACTCTCGTGCTCTCACCACTTG
TTGCATCGTGACCCGTCCTTTGTGCGGGCGAAAGCTTGTCGGTTGCCGAG
GACAGACGCGGTGAGTTCCAAAGGTTTAGGTACAAGGTTGTACACCCACT
CTCGCTTGCTGCCCGCCGTCGTGACAAGACTGCAGAGAGGAGGGCCGCAG
CCTAACCATGGCACAAAAGTGCAGATAGTTTCATCGAATATCGATTGACC
TGTTGCTCGGTCCATGTGGTGTTGTGATACGAAAGCTGTAGCGCAAATGA
ACGTACTCATCGAGCTCTTTCATGTGTCCAATTTTGTCATCCGATGCGTC
CTTCATAGGGCGGCCTGGGCACCAAAAATAGCGATCGCACTTTTGTGCCA
TGGTTACCACAGCCGCACCCGGACTCCCCAACACCAAACAGAGCCAGCCT
CCCCCACACCTACTTGTACTTCAACCCTTTACCCCTGGGGTACGTATAAT
CATAGGGTTTTGGTGTTGTCCAGTTTCCCAGGGGTAAAAGGGTTAAGCAG
AAGAGGAAACGGTGCCGCGTCCCATGGAGGTCTCCCCTGTGGGATGTGGT
TTCGATGTCATGTCGTACTACAGTGGAGTGCCTTAGGTATCACATCAACT
TTCGAACAGTGGCCTTGGGACAAGGCCCGATATCGTACAGTGCAGTGGAG
TGCCTTAGGCATCAATCACATCAACTTACGAACAACAACCTTGGGAGAAG
GCCCGATTTCGTACTAAGGCATCACATCAACTTGCGAAAGAGGACTTTGG
GACAAGGCCCGGAGATGGACCGCTCCAAACATTTGCTTGAAGCACTTCGA
AGTAGAAAAAATGAGGTACCCCCTCCCCCCACTGCCACCTCCCACGCGCT
CGTCTGGTCCACAGCCGGCCCGGCTTTGCCCTCTCTTGTCCCCGGCGCCG
CGGCCCCCAAACCAGCAACTGCGACCGCCATGAGCGATTCACAGGGGTTC
AGCGCAGGTGAGATATCGCGGCGGACATGGGTGATTCATATCAAGTGTAA
CGAGGCAAGTACAATCGCACGCGTGTGAGACTGAGTGTTCTCACATTAGT
GGTTATCCCATTTAAGGATGGAGTGTTCGTATAATAGTGATTGTCACATC
ACAGAGTTAAAAACCAAAAAAGGGGACATGGTTTCTGCAGGCGCGTGCGT
TCGAGGGCTTCTGTGTGTGTGTGTGTGCGTGCGTGTATGTGCGTGCATGT
GTGCCGTGTGTGCGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTGCGTG
CGTGTGTTGTGTGTGTGCAATACGCGTCGGCGGCACAGGGCGCTGCTCGA
GCACTACTGTGTTGCTACTGTATTGTACAGTGTACAGTTGCTGCTGTACA
GCAAGTGCTGTACTGTACGAGTACTGTACATGCTTAGGCCTGCTACAAAA
AAGCATCAAAATTTCACCTAAAAGTAAAATCCGGGCCGGGGTTTCCACAC
GGTGATTAGAAGTTTTGGCTGGGCCTGGCCCAATTTCGTGCCCAAGAACC
TGTTTCTTGCGTCAAAAAGGAAAATCGCCCTATTTTGCCCCACAAACCGG
AAATAGCCGTTTCCTTTTTTGTAGCGGGGCTATACATGGTTGAAAGCATG
CCTGGTCAGAGAGAGCGTGCTCTTCTCTACAGCCGTATCCTGCCCCTGGC
GCGACTGACTGACCCCGCCATTTTTTCGGCCTGGTGCGCCCACCAGGTGA
TTTTGGCCAAAGCGACTCCGCTGACTTAAGTCTTTTGTCTTCTTTTGTCC
CCTGCGCTGCCCCCTGGCACGGCTGACCCCCGCCGTTTCTGCCTGCTGCA
TGCACCCACCTGGTGATTTTGGCCCAAGCGACTCCGCTGACTAAGTCTTT
TGTCTTCTTTTGTCCCCTGTGCTGGCTGCCCCTGGCGCGACTGACTGACC
CTGCCGTTTTTTCCGCCCGCTGCCCCCCCACCAGGTGATTTCGGCCAGAG
CGACTCCTTTGGCGATGGCTATGGCCTGGGCAACGCCTATGCTGACATGT
ATGGTTACGGAGGCTACGGGGCTTTTGCCGGCTACAGCGACGGCCAGGTG
CCTCCGTGGCTTGAATTTGCACAGGCCTACACGGATGTCACGAAAACAGA
CAAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig90:199705..203358+ >mRNA_S-ischiensis_contig90.20859.1 ID=mRNA_S-ischiensis_contig90.20859.1|Name=mRNA_S-ischiensis_contig90.20859.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=396bp|location=Sequence derived from alignment at S-ischiensis_contig90:199705..203358+ (Schizocladia ischiensis KU_0333)
ATGAGCGATTCACAGGGGTTCAGCGCAGATGAGCGATTCACAGGGGTTCA
GCGCAGGTGATTTCGGCCAGAGCGACTCCTTTGGCGATGGCTATGGCCTG
GGCAACGCCTATGCTGACATGTATGGTTACGGAGGCTACGGGGCTTTTGC
CGGCTACAGCGACGGCCAGGTGCCTCCGTGGCTTGAATTTGCACAGGCCT
ACACGGATGTCACGAAAACAGACAAGGTGATTTCGGCCAGAGCGACTCCT
TTGGCGATGGCTATGGCCTGGGCAACGCCTATGCTGACATGTATGGTTAC
GGAGGCTACGGGGCTTTTGCCGGCTACAGCGACGGCCAGGTGCCTCCGTG
GCTTGAATTTGCACAGGCCTACACGGATGTCACGAAAACAGACAAG back to top
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