mRNA_S-ischiensis_contig90.20856.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.710e-94 Identity = 207/547 (37.84%), Postives = 281/547 (51.37%), Query Frame = 1
Query: 58 RSANLVTLAGIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRKG---------------------------------------------------------------------------AAVAEKVSEQRAKGTSGFTE---------------------------------------GESEWEDPEDVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNPTSAAWAIA 1356
RSA+LV + G+ +LL + VN + ++W +D+FW SL+LFF+ P GS+I RA+RLAVVFHP+ +R LPWLIPERNY+ +L+ SV ++A+PIY + T+++W+I+P +L +L F+V LA +YP IRNVDD+FNISKE+ + V + AV + +GG QRW+G ++I I ++F +S+V+P+RRLA DPLA TKRNYADRVLLSR A A +E+ TS FT+ G E E+ E VW+FERLA TP+LA AFE ++++ALC ESVLFL EVSRY +Y+ DA SP+ QF F ++T TFI G+PEEVNIS DK+ ILE Y G + F + E+RRLIF +AY EV+ MLE NLL+RF+ T FK VR QR + + + P A A A
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVG-NNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAGDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEME-VWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRS--------------SPS----QFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSPPLPAGVAAA 529
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 325 bits (833), Expect = 4.200e-94 Identity = 201/546 (36.81%), Postives = 284/546 (52.01%), Query Frame = 1
Query: 52 RRRSANLVTLAGIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRK---GAAVAEKVSEQRAKGTSGF---TEGESEWEDPE---------------------------------------------------------------------------------------------------------DVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNPTSAAWAIA 1356
R RSA+LVTL G+++LL + VN A ++W +D+FW SL+LFFV P GS+I RA+RLAVVF+P+ + LPWLIPERNY+ +LLAS+ +LA+PIYH+ T+++WD +P +L+ + +V+L +YP IRNVDD+FNIS E+ V + + +V +GG QRW+ T +I +V + ++F +S+V P+RRLA DPLA TKRNYADRVLLSR A +S +RA +S ++ E +ED E +VW FERL TP+LAAAFE ++++ALC ESVLFL+EVSRY +Y+ A+ P+ QF F ++T TFI GAPEEVNIS +D++ ILE Y G + F + E+RR++F ++Y EV+ MLE NLL+RF+ T +FK VR+QR + + + P A A A
Sbjct: 95 RTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWL-TSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPT-------------NAAGTCPT------QFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVAAA 620
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 315 bits (806), Expect = 1.140e-91 Identity = 178/437 (40.73%), Postives = 260/437 (59.50%), Query Frame = 1
Query: 52 RRRSANLVTLAGIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRKGA---------AVAEKVSEQRA-KGTSGFTEGESEWEDPEDVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNP 1332
R RSA LV + G+A +L + VN A ++W D+FWTSL LFF+ P G +I RA+RLAVVFHP+ +R LPWLIPERNY+ +L+ASV +LA+PIYH+ T+ +WD + +L+ + +V LA +YP IRNVDD+F+IS E+ + + + L+GG +RW+ +++ ++ M ++F VS+V P+RRLA DP A T+RNYA+RVL AV SE+ +G G S +D D+W FER+ TP+LA AFE ++++ALC ES LFL+EVSRY G+Y+ ++ S + QF F ++T TFI G+PEEVNIS ++++ IL Y+ G ++F + +RR+IF +AY V+ MLE NLL RF+ T FK + Q+ V+ + P
Sbjct: 84 RTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLA-NNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHSIGGNRLDAVRRGQSERGDDRGRDGGRRSRSHKQDI-DLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYAT-----------------TIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 501
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 283 bits (725), Expect = 5.500e-80 Identity = 193/552 (34.96%), Postives = 273/552 (49.46%), Query Frame = 1
Query: 58 RSANLVTLAGIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHI--------FIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRK---GAAVAEKVSEQRAKGTSGF---TEGESEWEDPE---------------------------------------------------------------------------------------------------------DVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNPTSAAWAIA 1356
RSA+LVTL G+++L + VN A ++W +D+FW SL+LFFV P GS+I RA+RLAVVF+P+ +R LPWLIPERNY+ +LLAS+ +LA+PIY + T+++WD +P +L+ + +V+L +YP IRNVDD+FNISKE+ + + V +A ++ V+ + H+ + + + + SVV P+RRLA DPLA TKRNYADRVLLSR A +S +RA G+S +E E +ED E +VW FERL TP+LAAAFE ++++ALC ESVLFL+EVSRY +DY+ A+ P+ QF F +T TFI GAPEEVNI ++ ILE Y G + F + E+RR++F ++Y V+ MLE NLL+RF+ T +FK VR+QR + + + P A A
Sbjct: 19 RSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKEL-ITVTVTIAVVTCEAHSFVHRSTHVESCL-QQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQN------------DDYATPTNAAAGTCPT------QFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVVAA 546
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 282 bits (722), Expect = 7.510e-79 Identity = 188/551 (34.12%), Postives = 275/551 (49.91%), Query Frame = 1
Query: 52 RRRSANLVTLAGIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAV---SSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRK--------------------------------------GAAVAEKVSE-QRAKGTSGFTEGESE--------------------WEDPE------------------------------------------------------DVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNPTSAAWAIA 1356
R RSA LV + G+A +L + VN + ++W D+FW SL+LFF+ P GS+I RA+RLAVVFHP+ +R LPWLIPE NY+ +L+ASV +LA+PIYH+ T+ +WD + +L+ + +V LA +YP IRNVDD+F+IS E +++ AT V S + + G +RW +++ +V M I+F VS++ P+RRLA DPLA T+ NYA+RVL +R G A+A ++ +R G++G+ + W D E D+W FER+ TP+LA AFE +++KALC ES LFL+EVSRY G+Y+ A +S G+S QF F ++T TFI G+PEEVNIS ++++ IL Y+ G ++F + E+RR+IF +AY V+ MLE NLL RF+ T FK V Q+ V+ + A A++
Sbjct: 84 RTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTE----LIIVTATIVLITSEEVDGQWWGPYERRWFA-NNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAVTTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASS---------GSSCPT--------QFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSPHLQAGVAVS 612
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 254 bits (648), Expect = 1.290e-71 Identity = 156/426 (36.62%), Postives = 227/426 (53.29%), Query Frame = 1
Query: 85 GIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLL----------SRKGAAVAEKVSEQRAKGTSGFTEGESEWEDPEDVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNP 1332
G+A +L + VN A ++W D+FWTSL+LFF+ P GS+I RA+RLAVVFHP+ +R LPWL+PERNY+ +L++SV +LA+PIYH+ T+ +WD + +L+ + +V LA +YP IRNVDD+F+IS E+ + TA + T T+RNYA+RVL +R A + +G G S +D D+W FER+ TP+LA AFE ++++ALC ES LFL+EVSRY G+Y+ +S G+S QF F ++T TFI G+ EEVNIS ++++ IL Y+ G ++F + E+RR+IF +AY V+ MLE NLL RF+ T FK + Q+ V+ + P
Sbjct: 4 GVAGILTMLVTVNDATTVIWDTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTEL------IIVTATIGLITT-------------------------------------------TRRNYANRVLPDHTEPHSIGGNRLDAVRRGQTERGDDRGRDGGRRSRSHKQDI-DLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASS---------GSSFPT--------QFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 362
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 228 bits (582), Expect = 9.430e-65 Identity = 108/204 (52.94%), Postives = 154/204 (75.49%), Query Frame = 1
Query: 109 MPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSR 720
+ VN A ++W +D+FW SL+LFFV P GS+I RA+RLAVVFHPK +R LPWLIPERNY+ +++AS +LA+P+YH+ T+++W+I+P ++L ++S+ F+VV A +YP IRNVDD+F+ISKE+++ + AV +L YGG +RW+G +++F++ +VF VSVV+P+RRLAFDPLA TKRNYADRVLLSR
Sbjct: 2 LAAVNGAINIVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLG-NNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSR 204
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 230 bits (587), Expect = 4.130e-62 Identity = 163/514 (31.71%), Postives = 239/514 (46.50%), Query Frame = 1
Query: 79 LAGIAILLGFMPQVNHACLLLWGE--SIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRK------------------GAAVAEKVSEQRAK-----------------------------------GTSGFTE---------------GESEW--------------------------------EDPEDVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERG--QFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATM 1308
+AG ++++ ++ VN + +LWG S+D+FW SL+LF VLP+ GS+I RA+RLAV+FHP+ ++ LPWLIPERN++F + V L +PIY D T+++W VDD+FNIS+E+ + ++FL A+ + Y +V W G + F + VF VSVV P+R LA DPLA +K+ DR +L+R+ G++ A +V+ ++ + TS + E G W E+ + W FERLA P++AAAFE + +KALC E VLFL EVSRY G++ P PA G Q+ AF + FI G+ EEV+IS +++ ++E + G +F E+RRL+F +AY EV+ MLEDNLL+RF+ T FK VR QR M
Sbjct: 1 MAGSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLEVWK-----------------------------VDDLFNISRELIIVTILFLILAIGIKCGLYY---EVDMWTGGNLNFFI-TAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAKATADIRGSSRAVRVASRKLEEGLYGDGVDENDDDGCDTTPXXXXXXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDF-----------------------PEPAGLSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQRRMM 458
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 221 bits (563), Expect = 5.710e-59 Identity = 165/538 (30.67%), Postives = 230/538 (42.75%), Query Frame = 1
Query: 58 RSANLVTLAGIAILLGFMPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRK------------------GAAVAEKVSEQRAKGTSGFTEG------------------------------------------ESEWEDPE-----------------------------------------------------DVWHFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYTQGEYSRAAVDASVEDYSRWVVGASVEVPSPAEERGQFAAFAHVTQTFICNGAPEEVNISAQDKRFILECYYGGRDVFMGLPSEDRRLIFDQAYKEVRGMLEDNLLQRFMLTAEFKQVRQQRATMNVLGGTNP 1332
RSA LV + G+ LL + +N + ++W +DYFW SL+LF V+P GS+I R +RLAVVFHP+ +R LPWLIP G Y D+ + F+V LA +P IRNVDD+F+ISKEI + + A+ +V +GG +RW+ + I+ + ++F VS+V+P+RRLAFDPLA T+ N+A+R+LLSR G+ SE+ A+ G EG W + E +VW FER+ASTP+LAAAFE ++++ALC ESVLFL+EVSRY Y S + R QF +F ++T TFI G+ EEVNI R+IF +AY++V+ MLE NL+ RF+ T FK VR QR M + G+ P
Sbjct: 3 RSAYLVMVEGVCALLTMLVTLNSSINVVWDCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIPGGRSDAGY------------YPDDDLS-----------------AFAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKS-VSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPT-----------------RASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSPP 466
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI) HSP 1 Score: 183 bits (465), Expect = 2.160e-47 Identity = 91/217 (41.94%), Postives = 145/217 (66.82%), Query Frame = 1
Query: 79 LAGIAILLGFMPQVNHACLLLWGE--SIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKGRRRLPWLIPERNYIFGILLASVCLLALPIYHDETMQIWDIVPLHIELLEYISLGFSVVLAALYPLIRNVDDMFNISKEISVNMVVFLATAVSSRLVTLYGGEDVQRWMGTDHIFIVGMTIVFWVSVVEPMRRLAFDPLADTKRNYADRVLLSRK 723
+AG ++++ ++ VN + +LWG S+D+FW SL+LF VLP+ GS+I RA+RLAV+FHP+ ++ LPWLIPERN++F + +V LL +PIY D T+++W+++ ++LL +L + LA ++P IR VDD+FNIS+E+ + ++FL A+ + + +V W G + F + VF VSVV P+RRLA DPLA +K+ R +L+R+
Sbjct: 1 MAGSSMVVSYLAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSAMAVALLIIPIYQDMTLEVWEVIAKQVDLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLILAIGIKCGLYF---EVDMWTGGNLNFFI-TAAVFGVSVVGPLRRLAVDPLAGSKQRCTGRAVLARR 213 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig90.20856.1 >prot_S-ischiensis_contig90.20856.1 ID=prot_S-ischiensis_contig90.20856.1|Name=mRNA_S-ischiensis_contig90.20856.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=418bp MPQVNHACLLLWGESIDYFWTSLVLFFVLPIYTGSFIARAVRLAVVFHPKback to top mRNA from alignment at S-ischiensis_contig90:150969..164467- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig90.20856.1 ID=mRNA_S-ischiensis_contig90.20856.1|Name=mRNA_S-ischiensis_contig90.20856.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13499bp|location=Sequence derived from alignment at S-ischiensis_contig90:150969..164467- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig90:150969..164467- >mRNA_S-ischiensis_contig90.20856.1 ID=mRNA_S-ischiensis_contig90.20856.1|Name=mRNA_S-ischiensis_contig90.20856.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2508bp|location=Sequence derived from alignment at S-ischiensis_contig90:150969..164467- (Schizocladia ischiensis KU_0333)back to top |