mRNA_S-ischiensis_contig90.20854.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig90.20854.1
Unique NamemRNA_S-ischiensis_contig90.20854.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 2.010e-45
Identity = 89/197 (45.18%), Postives = 132/197 (67.01%), Query Frame = 1
Query:   67 EKDFAYFKLVFSSLYIVFGAWAMLQFCKARWVLDIRTRSAHLVMMAGAASLLNLLTHINFSCDKIWGKSVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIVMVALLVMVFV 657
            +K  A  +L     +IV G +A+++F ++RW+LDIRTRSAHLV + G + LL++L  +N +   +W   +DWFW+SLLLFF++P   GSYI R++RLAVVF  + +  +PWLIPE NY+  L+ A +  L++P Y    LEV D  PKQ + ++    +L ++L  +YP IR VDD+FNISTEL+ V V ++V+  V
Sbjct:   60 DKALALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIV 256          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 5.160e-43
Identity = 90/156 (57.69%), Postives = 116/156 (74.36%), Query Frame = 3
Query: 1782 EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEA-SQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 2246
            EV +FERLA TP+LAAAFE ++++ALC ESVLFL+EVSRY   DY+++    ++    +QF  FCY T TF+  G+PEEVNISDADK+ ILD Y  G  +F  + + E RR+IF  AY+EV+SMLEANLLRRF++T+ FK VR +RE V AM DSP
Sbjct:  118 EVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGV-NEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSP 272          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 6.740e-43
Identity = 93/216 (43.06%), Postives = 135/216 (62.50%), Query Frame = 1
Query:   58 TAGEKDFAYFKLVFSSLYIVFGAWAMLQFCKARWVLDIRTRSAHLVMMAGAASLLNLLTHINFSCDKIWGKSVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIVMVALLVMVFVGVLSERVCGRNAGEVD 705
            T  +K  A  +L     +IV G  A+++F +++W+LDIRTRSA+LVM+ G A +L +L  +N S   +W    DWFW+SLLLFFI+P   GSYI R++RLAVVF  + ++ +PWLIPE NY+  L+ A V  L++P Y    L V D   KQ   ++    +L + LA +YP IR VDD+F+ISTEL+IV   +++     + SE V G+  G  +
Sbjct:   46 TRTDKALALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIVL-----ITSEEVDGQWWGPYE 256          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 7.060e-41
Identity = 90/157 (57.32%), Postives = 113/157 (71.97%), Query Frame = 3
Query: 1776 QQEV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 2246
            + EV +FERLA TP+LA AFE ++++ALC ESVLFL EVSRY   DY++          SQF  FCY T TF+  G+PEEVNISDADK+RIL+ Y  G   F ++ + E RRLIF +AY+EV+SMLEANLLRRF++T+ FK VR +RE V  M DSP
Sbjct:  365 EMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDV-NEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSP 520          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.630e-40
Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 1
Query:   58 TAGEKDFAYFKLVFSSLYIVFGAWAMLQFCKARWVLDIRTRSAHLVMMAGAASLLNLLTHINFSCDKIWGKSVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIV 627
            T  +K  A F+L     +IV G  A+ +F + + +LDIRTRSA+LVM+ G A +L +L  +N +   IW    DWFW SL LFFI+P   G YI R++RLAVVF  + ++ +PWLIPE NY+  L+ A V  L++P Y    L V D   KQ   ++    +L + LA +YP IR VDD+F+ISTEL+IV
Sbjct:   46 TRTDKALALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIV 235          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.030e-34
Identity = 72/157 (45.86%), Postives = 105/157 (66.88%), Query Frame = 1
Query:  178 RSAHLVMMAGAASLLNLLTHINFSCDKIWGKSVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIVMVALLVM 648
            RSAHLV + G + L ++L  +N +   +W   +DWFW+SLLLFF++P   GSYI R++RLAVVF  + ++ +PWLIPE NY+  L+ A +  L++P Y    LEV D  PKQ + ++T   +L ++L  +YP IR VDD+FNIS EL+ V V + V+
Sbjct:   19 RSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTVTIAVV 175          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 5.840e-31
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 1
Query:  196 MMAGAASLLNLLTHINFSCDKIWGKSVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIV 627
            M+ G A +L +L  +N +   IW    DWFW SLLLFFI+P   GSYI R++RLAVVF  + ++ +PWL+PE NY+  L+ + V  L++P Y    L V D   KQ   ++    +L + LA +YP IR VDD+F+ISTEL+IV
Sbjct:    1 MVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIV 144          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 7.490e-31
Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 1
Query:  226 LLTHINFSCDKIWGKSVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIVMVALLVMV--------FVGVLSERVCGRN 690
            +L  +N + + +W   +DWFWVSLLLFF++P   GSYI R++RLAVVF  K ++ +PWLIPE NYV  L+ A    L++P Y    LEV +  PKQ   +  ++    +V A +YP IR VDD+F+IS EL IV  A++++         + GV   R  G N
Sbjct:    1 MLAAVNGAINIVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGNN 163          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 2.040e-30
Identity = 68/152 (44.74%), Postives = 102/152 (67.11%), Query Frame = 1
Query:  199 MAGAASLLNLLTHINFSCDKIWGK--SVDWFWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGLVAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIRKVDDMFNISTELVIVMVALLVM 648
            MAG++ +++ L  +N S   +WG   S+DWFW+SLLLF + P+  GSYI R++RLAV+F  + ++ +PWLIPE N+++ L A  V  L +P Y +  LEV +   KQV  + + T +L   LA ++P IRKVDD+FNIS EL+IV +  L++
Sbjct:    1 MAGSSMVVSYLAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSAMAVALLIIPIYQDMTLEVWEVIAKQVDLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLIL 152          
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.150e-28
Identity = 80/157 (50.96%), Postives = 102/157 (64.97%), Query Frame = 3
Query: 1782 EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEA--SQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 2246
            EV  FERLA TP+LA AFE ++++ALC ESVLFL+EVS Y   DY++ Q R + G +  +QF   CY T TF   G+PEEVN SDADK+ I +              N+     F  AY++V+SMLEANLLRRF++T+ FK VR +RE V AM DSP
Sbjct:  483 EVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYAT-QTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFE--------------ND-----FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSP 619          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7G2T8_ECTSI2.010e-4545.18RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T5_ECTSI5.160e-4357.69RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE98_9PHAE6.740e-4343.06RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T7_ECTSI7.060e-4157.32RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FTW0_ECTSI1.630e-4045.26RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE1.030e-3445.86RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW2_ECTSI5.840e-3145.83RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJQ7_ECTSI7.490e-3142.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJQ9_ECTSI2.040e-3044.74Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5LA03_9PHAE1.150e-2850.96RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:130046..147786 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Exons14
Model size2277
Cds size621
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817409.0451972-UTR-S-ischiensis_contig90:130045..1301181622817409.0451972-UTR-S-ischiensis_contig90:130045..130118Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 130046..130118 +
1695741092.991081-UTR-S-ischiensis_contig90:130045..1301181695741092.991081-UTR-S-ischiensis_contig90:130045..130118Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 130046..130118 +
1622817409.0570107-UTR-S-ischiensis_contig90:133254..1333131622817409.0570107-UTR-S-ischiensis_contig90:133254..133313Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 133255..133313 +
1695741093.0001507-UTR-S-ischiensis_contig90:133254..1333131695741093.0001507-UTR-S-ischiensis_contig90:133254..133313Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 133255..133313 +
1622817409.1591299-UTR-S-ischiensis_contig90:140272..1403831622817409.1591299-UTR-S-ischiensis_contig90:140272..140383Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 140273..140383 +
1695741093.1008391-UTR-S-ischiensis_contig90:140272..1403831695741093.1008391-UTR-S-ischiensis_contig90:140272..140383Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 140273..140383 +
1622817409.1735845-UTR-S-ischiensis_contig90:142645..1427151622817409.1735845-UTR-S-ischiensis_contig90:142645..142715Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 142646..142715 +
1695741093.1147735-UTR-S-ischiensis_contig90:142645..1427151695741093.1147735-UTR-S-ischiensis_contig90:142645..142715Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 142646..142715 +
1622817409.1866794-UTR-S-ischiensis_contig90:144298..1444111622817409.1866794-UTR-S-ischiensis_contig90:144298..144411Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 144299..144411 +
1695741093.1303911-UTR-S-ischiensis_contig90:144298..1444111695741093.1303911-UTR-S-ischiensis_contig90:144298..144411Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 144299..144411 +
1622817409.1978347-UTR-S-ischiensis_contig90:145279..1454081622817409.1978347-UTR-S-ischiensis_contig90:145279..145408Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 145280..145408 +
1695741093.1403472-UTR-S-ischiensis_contig90:145279..1454081695741093.1403472-UTR-S-ischiensis_contig90:145279..145408Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 145280..145408 +
1622817409.2091346-UTR-S-ischiensis_contig90:146178..1462621622817409.2091346-UTR-S-ischiensis_contig90:146178..146262Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 146179..146262 +
1695741093.150703-UTR-S-ischiensis_contig90:146178..1462621695741093.150703-UTR-S-ischiensis_contig90:146178..146262Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 146179..146262 +
1622817409.2206352-UTR-S-ischiensis_contig90:146769..1477861622817409.2206352-UTR-S-ischiensis_contig90:146769..147786Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 146770..147786 +
1695741093.1610727-UTR-S-ischiensis_contig90:146769..1477861695741093.1610727-UTR-S-ischiensis_contig90:146769..147786Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 146770..147786 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817409.0697346-CDS-S-ischiensis_contig90:133313..1333601622817409.0697346-CDS-S-ischiensis_contig90:133313..133360Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 133314..133360 +
1695741093.0085478-CDS-S-ischiensis_contig90:133313..1333601695741093.0085478-CDS-S-ischiensis_contig90:133313..133360Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 133314..133360 +
1622817409.0832593-CDS-S-ischiensis_contig90:133732..1338501622817409.0832593-CDS-S-ischiensis_contig90:133732..133850Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 133733..133850 +
1695741093.026253-CDS-S-ischiensis_contig90:133732..1338501695741093.026253-CDS-S-ischiensis_contig90:133732..133850Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 133733..133850 +
1622817409.0976691-CDS-S-ischiensis_contig90:134869..1349801622817409.0976691-CDS-S-ischiensis_contig90:134869..134980Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 134870..134980 +
1695741093.041023-CDS-S-ischiensis_contig90:134869..1349801695741093.041023-CDS-S-ischiensis_contig90:134869..134980Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 134870..134980 +
1622817409.1126761-CDS-S-ischiensis_contig90:135823..1359091622817409.1126761-CDS-S-ischiensis_contig90:135823..135909Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 135824..135909 +
1695741093.059791-CDS-S-ischiensis_contig90:135823..1359091695741093.059791-CDS-S-ischiensis_contig90:135823..135909Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 135824..135909 +
1622817409.12449-CDS-S-ischiensis_contig90:136741..1368281622817409.12449-CDS-S-ischiensis_contig90:136741..136828Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 136742..136828 +
1695741093.0698478-CDS-S-ischiensis_contig90:136741..1368281695741093.0698478-CDS-S-ischiensis_contig90:136741..136828Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 136742..136828 +
1622817409.136037-CDS-S-ischiensis_contig90:137817..1378881622817409.136037-CDS-S-ischiensis_contig90:137817..137888Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 137818..137888 +
1695741093.0802302-CDS-S-ischiensis_contig90:137817..1378881695741093.0802302-CDS-S-ischiensis_contig90:137817..137888Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 137818..137888 +
1622817409.1476157-CDS-S-ischiensis_contig90:139321..1394221622817409.1476157-CDS-S-ischiensis_contig90:139321..139422Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 139322..139422 +
1695741093.0904777-CDS-S-ischiensis_contig90:139321..1394221695741093.0904777-CDS-S-ischiensis_contig90:139321..139422Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 139322..139422 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20854.1prot_S-ischiensis_contig90.20854.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig90 133314..139422 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig90.20854.1

>prot_S-ischiensis_contig90.20854.1 ID=prot_S-ischiensis_contig90.20854.1|Name=mRNA_S-ischiensis_contig90.20854.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=207bp
MLQFCKARWVLDIRTRSAHLVMMAGAASLLNLLTHINFSCDKIWGKSVDW
FWVSLLLFFITPVYTGSYIARSMRLAVVFRQKWRKKVPWLIPEVNYVYGL
VAAGVLALSVPFYSNAELEVCDRAPKQVATIQTITALLTIVLAGLYPLIR
KVDDMFNISTELVIVMVALLVMVFVGVLSERVCGRNAGEVDCGKHHLCGV
ALRVLG*
back to top

mRNA from alignment at S-ischiensis_contig90:130046..147786+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig90.20854.1 ID=mRNA_S-ischiensis_contig90.20854.1|Name=mRNA_S-ischiensis_contig90.20854.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=17741bp|location=Sequence derived from alignment at S-ischiensis_contig90:130046..147786+ (Schizocladia ischiensis KU_0333)
GAGGGCGTGGGCGTGGGCGTGGGCCCGGCCCGTCTGCTTGAGCGGTGCGA CCCGGTCACCGCCGGCGAGAAAGGTGAGTGATTCATAACAATTGTAACGA GGTACAACGTGTGTGACATTGAGTGTGCTTGTATTACTGTAGTGTTTATC CCATTTAAGAATTGAGTGTTCTCGTACGAATATGTATTAGTGACTATCAC ATCAAAGAATTAAGGTGAGGGCTGGCGGAGCTCGAGCCGAGAGTGAAAGT ACTGTACTGTAGTAGTCGTACGTGTACGTGTAGTTCCAGTACTTAGTTGG AGCTGAGAGTGAAAGAACTGTAGTAATCGTACATGTACTAGTAGTTCCAG TATTGTCGAGGTGCGGGCCACGTCACTAGAGACCTCAGTGGCCCTTCCTT ATAGCTCGTCAGGGGAAATTTGTGCGGGGAAGGGGAGAAGAGGAGGAGGG GGAGGGCGGGCTTAGTTCGAGCTGAGAGTGAAAGGACTGTGGTAGTCGTA CGTGTTGTTCCAGTACTTTCTGTAGGCAGAAAGGAGCCCCCCGCACCCAC CCGGACTCTCAAGAGTCGGCAATGGGGGGGGTATGGACTTGGCCATCCCT CCGGTTCTGGCGGGGGGTTGGCCACCCCCTCCCACCCTGGCTCTGCCAGG GGAGGGGGGGGTCCTGCTCTGTCTTGCCCGAGGCACGTGGTCGGTGGCCT CGGGACTACGGCAAGCACAATGTGAGTACATATATATATGTACTTGCTGT AGTCAGACCAGGCCCGAAGCAGTGAAAGCAACCAGTGCCAGCGCAGACAT TCTCGCCCTCCCGGGCCTCTCTTGACCCTTTTGCCCCTGGGGTCCCTATA GTCATAGGGTTGTAGTGTGTATGTCCAATTTACCAGGGGTAAAATGGTTA AAATCTCTTTCCCCTCGACATCCGTGTCCTTGCGTGTCGGGCGATGTACT CGAGTTATGTACTCGAGACTGTACCTGCTACGGTACCTACAGCTGCCTTT TTTTTACTCCCCACCTGGAGCCAGACCGTGCGACCTGCATGCGGCGCTCA ACTCTTGAGGACTGTCGAGTAAACTGCTCATAGCCTCCCTTGTAGTTGTA CTCGACATTTTTACGAGTGCAGTGCCCGCATCCCCTTAAGCTTATTGTTC CACTGTACACACACACAAGCAGCGGTCTGGTGCGGCATGAGAGAGATACG TAGTATATATGTGTATACTCGTATATATATACAGTGCCCGTATCCCCTAT GGTTGGGTCTACTGTACACGTATATATGCATATATACAGTGCCCGCATCC CCTGTAGTTTACTACGGTGTGACATTGTTGAGGAAAACAAAAGTCGGTGT ATAGGCCGATTTGGGCCCGCGATGGCGAAAAAGAAATCGTCGAAGATCCC CAATTGCTTGCGACCGACGCCGAACCGCGTTGCGCGTCCATAACAAAAAA GGAAGCTGGGAACATGCCCTCTCGATCAAGCCCAGTACTCGCATCTGAAA TGGACCGGTCAGTCCCGAGATATGGGATGCGGCGTGCAGGGTGTGCCCCC AAAAGTACCCCCAACGGGGGAGCATACCACGTCGGCTGCACGCCACACGA GAACGCCGGACCACTTCAGGGGACTAGCAGATGTCATTGGCTGCTGGCTA ACTGAGAGACATTCCGATGAGCCGACATCGTTCGCAATTGGTTACAGTTC CGGCACAAATTGCGAATTCCGCCGATCCGCCCATACTTTAATCAAGTAGT CCGAGTTCGCGGATCGGGGCAGGGTCCCCAGACGCGCTGCACGGTCTACG GCGCGCCTCATGCAGAGCTGGGCTTGCTTCCTGTACGCAAATGTGTGCCG TGTGGTCCCCTCCACCTGATAAAAGTTGCGGGACCATCTCGATCGACGGA CAGCTCGAGAAACATGAGTTTGAAGGAGCGCCGCCCCGATCCCACTTTCC GACTGCCGGGTGGGCATCATGAAATCTCCGCGAGTTCGACGAACTTGTAC GCAACTCAAGCGCGAGCATGTAGCCTGGTTCACAAGCTTTCGTTAGAGTA TCGCATCGCAGGGCATTTCATTGCCGTTCCGGAGTTATGGAATCTCCCCT ACCAGCCTTCCTTAACAGTGTCACACCGTAGTAGTGTTCTACTGTACACA CGCACACACATATATATGTATATATATACAGTGCCCGCATCCCATATAGT TTAGTGTTCTATGTACAGTACTACTAGTAGTAATAGTGAACGTCCTCGCA GGTCTAAGGGAATACTTTGTAGTTGCCCACTGAATGGCGTCTTTGCCGGA ACACATATACAGGTAGTTTAGTGTTCTACTGTATAGTACTTCCAAGTACT TCCAAGTACCAGTATTGTAGTCAATGTCCTCACAGGAGGCCTAGGGGAAT AGATGCCCACTGAACAGCCTGAACGGCCTCTTTACCGGAACACAGCAGCC AGCGGCTGAGAGTCGTATTTGCGCCACTCACCCGCTGCAGCCTCCAGGTC TCCCAGCCCCCACCCTGCCCTCTCCCCCACCTCCCCCCCCCGCTCCACCA CCTCCTCCTCCTCCTCCTCCCCCTCGCATTGCACTGTGGTGGTGGCCGTG GTGGTTGCGGACTTTCCCACTTCAAGTTGTACGAGCCTTGTGGCGCCTTC AATTCGCAGGCATTGTCCTGCACATGCATCTTTCTGATAGCCACTGATAC GAGAACACTCCATTCTTAAATGGGATAGCCACAAATACGAGAACACTCAA TCTCGCACGCGTAAGTTTGTACCTCGTTACAATTTCTATGAATCATTTTT CTGAGTGATATCCCCCCCCCTCCCCTCCTGTCCCCGCGCGCTACTTGACG TGATCACCACGTAACAGACTTTGCCTACCGTAGACGGCGGAGAGACCTTG CCCCCCCGGGAAAATTTTCGGGATAATATTTCTCGCCGCACAGGTCCCTA GTTGTCCCGAAATCTCTTGGACAAGTACCTCCAGGTCCTGAGGGTATTTT TCCGAGTTTTCCCGCGCGAATCTGGCCAGTACTCGGCGAGAAAAGTTCTC CCGAAAATTGGCATGGGGGGGCAACATCTCTCTGACGATCACGGTACTTG AAACTGGTCCTCCATTCGCATGCATTGTGCTGCATGCATCTTTCTGAGTG ATATCACCCCCCCCTCCCCTCCCCTCCTGTCCCCACGCACGTGGCACACC ATGCAACAGACTTTGCCTACTTCAAGCTGGTCTTCAGCAGCCTGTACATT GTTTTCGGGGCGTGGGCAATGCTGCAGTTCTGCAAGGCGCGATGGGTGCT CGACATACGGACACGGTCAGTCGCGATCGCAAACAAACACTGACGTGGTG TGATTGATGACGCGTTCTCTAGTGCGCTGTGCGAGTGCTGTGGTTTTGAC GCCGTCTGTATGTACATCATCATGTCGTATGTGTTCCCCTCCCGCGCTCA AGGCACTGTTTGTCCAGTAGCTTGCAGAGTACTCTACAGCTGCCCCTCTG AGTGCAGTACTGATACTGCGCTTTGCTCGTTTAGTCGAGTTTGTGCTGTA GCGATCGTGACGTGCCGGCTCATCCCCTCCCTCTCTCCTGTCTCTCTGCC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCAGATCTGCCCACTTG GTGATGATGGCGGGAGCAGCGTCACTGTTGAACCTTCTGACGCACATCAA CTTCTCTTGCGACAAGATATGGGGCAAGTCTGTGGACTGGTTCTGGGTCA GCTTGGTGAGAATTGTTGTGTTCGTTGGGTGGACATGGATTGTGTGTGTG ATGTGATGTGCACACAAAAGCACTGTAGTTTGACATCACATCCCATCACA AAAAAACATCGGTGTGTGTGTGTGTGTGTGTGCATGTGCGCGCGCGCGCG CGCGTGTGTGTGTGTGCGTGCGTGCGTGTGTGCCTGGGTGTGTGTGTGTG TGTGCATGTGTGCATGTATGTGTACTCTCTCATGCGCACGCGTCATGGGC AAGGGAGGAGATTGGGAAGAGGGACAGGGAGAGATGGGAGGGTCAGAGAG GGAGGGGGGGGAGGGGGATGAGTGGGTGGTTTGGTTGGGGGGAGGGCGGG AGGCTAGGCTGAGAGAAAGAGCACACCATTGCAATATTTACAAGAGAGCC AAGGTGAGAGAAGCGGGGGGGGGGGGGGGAAGAGGAGGGAGGAAGGGATG GAGGGGGGAGGGCGGGAGGCAGGGACGATGAAAGAGAGGTACATGTAGAT AAATTTTCTTCCAATTCTGTACAGTGCCCTGGCGAACCGAACCGTTCGTT TTTCTCCTCCGTTTCAGCTTCTCTTCTTCATAATTGCCCCCGTGTACACG CCCTTGAACCCAAAACCCAGAACCCTAACCCTAAGAACCTTGACCTATAT GCCCTGCGAGTGAAGGCGAGTGAAAGGAAGGGCTTCCGGGGGTGGGGCCC TGAACTCGCGTACGTAGGAACGCCTCTTCTTTCCCACTTGCTTGTTTGTC TTCTTGAGAAAAACCTTGACTCCGCTCGACCGGAACGGAACTGTCCGTTT GTCTCTTCTCTTCCCTTTCCGCTCCTCTTCTTCATCACGCCGGTGTACAC GCCCTCAACCCTTTTCTCCCTGGGGTCCGTAAAATCATAGGGTGTTAGTG TAAGTCCAATTTACCAGGGGTAAAGGGGGTATAACCCAAAACCCAATACC GTAACCCTACGAATCTTTTGACTCCGCTCGAACCGAACCGTCCGCTTCTC TCTTCCGTCCGTTTATCTCGTCAGCTTCTCTTCTTCATAACGCCGGTGTA CACGGGCAGCTACATTGCGCGTTCCATGCGGCTGGCCGTGGTGTTCCGAC AGAAGTGGCGCAAGAAGGTGCCCTGGCTCATACCGGTGAGATAGCATGGG TAACACATAGCTCATGCTGTACCAGTGAGAGAAGAGGTGTAACTGTGTAA CCCCCGTCCTCTAGTGTTCAGGCAGAAGTGGCGCAAGAAGGTGCCCTGGC TCATTCCGGTGAGATAACATGTGTAAAGTAGGTTACTTGTAGGGTTAGGA TTAGGGTTTGCTTTAGGGCTGGCCGTGGTGTTCAGACAGGAGTGGCGCAA GAAGGTGCCCTGGCTCACACCGGTGAGTTACAGAAGATTGTAGCCCCCGT CCGCTATTCCGTGTGGTGCAAGAGGGTGCCCTGCAGCGAATAAGTCGGCG AGGGCATTTGTCGCAGTTGCGCTGGAGAACTTGGGCAGTTTCCCTGAGGA TGTGCGGGACCCGTCCGAGGGATCTCGGGGCAGTTGGGGACATACCCGCC TGTACTTGAAAGTATTGTACCTAGTCTCTCAACAATGGTGCCATTGGGCA ACATCTCTCCGACAAATAGGGCAGTACCGTACTTCCAAGCATGTGATGTG ATGTCATGTGATGTGGTTCGATGTGATGTCTACTCCAATGCACGGTAGTT TGACATCACATTGCGTCACATCACATCACATGAATTCTCTCCGACAATTA CAGTACCGTACCACCGCCCGCCCCCTAACCCCCCCCCCCTCCTTATTCTT AGTTCCTTGATGTGATAATCACTCATACAAGAACGCTCCATTCTTAAATG AGACAACTACTAATACGAGAACACCCAATCTCACACACGTGCGATTGTAC CTCGTTGCGTCAAGGACAATTTATATGAATATCCCCCCCAGACAAGTATC GTGACCCCTCCCCCCCTCCCTCCCACAGGAGGTGAACTACGTCTATGGCC TGGTGGCGGCTGGCGTGCTGGCTCTGTCCGTCCCTTTCTACTCCAATGCG GAGCTGGAAGTATGGTGAGGGCCCTGCCGGGCACAGCGTTGGCACGTAGG GGTTAACCCTTCTACCCCTGCGGTCCGTACAATCATAGGGTTTCCGGTGT GCAAGTCCAGTTTAGCAGGGGGAGGAGGGTCAACTAGGGCCTAGTAAGCC TTTATTGTAGGTCTAATTACCTCTGATCACAAGTAAGGGCCTAAAAGGGC GCCACTTAGGGGTTATGTGCCAATGGCCAGGCAGGGCGGGCTTGCGGCTT AGAAGTGTTTCTTGTGCTTTGTGCTGGGGTGGCGGCGGCTGGCGGTGGGC GCGGTATTGGGATGATTCGTATAAATTGTACTCGCACGAAGTAACGAGGT ACAATCGCACGGGTGTGAGATTGAGTGCTCTCGTACTAGTGGTTATCCCA TTTAAGTAGTGAGTGTTCTCGTATTAGTGGTTATCACATTTCGTACTGGG ACGGCGGCGCGACGCTCGCGATGGCAAATGTCAACTTATATGTTGCTCTG CCTTGATGCTCCGGGGCGGGGGGGTGCTTTGTTGATTTGCCCCCACCTCG CTCTTTGAGTTGCTTGCAGCGCGATTACTTGAAAGCTCATTCATACCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCCCTTCCCCCTCCC CTCCCCCCCCCCCCCCTCCCCCTCCCCATCCCCCTCCCCCTTCCCCTCCC CTTCCCCCTCCACCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCACC ACCTGCTTGCAACCCCCCACCCCACATGCACGCCTGCCATGTGCAGTGAC AGAGCGCCCAAGCAGGTGGCCACGATCCAGACCATCACCGCCCTCCTCAC CATCGTCCTGGCCGGCCTCTACCCCCTCATCAGGCGAGTTTGACCAATTT ACCCCTGGGGTCCGTATAGTCATGGGGTTCTTAGTCTGTGAGTCCAGTTT CGCAGGGGTAAAACGGTTAACAGTTGCCCCCGTCATGCTCTCGCCCGACT GGTCATGGCCTTGGACGGAGTTGGGCATTTGCGGCAGGGAGTGGCGTACC CACGGCGCTAAGCAGTGGTGGAATATCGATCAGTAGGTAGTTATCGGGCT CGACCGATGGTGTGGGCGGCATTGTGAACTGCTTCTTGAATTCAAACTAT CGAATATCGACTATCGATAGATATATAGATTACGGGACAAGCCTTTTGGC ACGGGGCCTGGAACTCGCTGCTTATCTACCACTCAAAATAGATCACTACT GTCGATAAATAGGTTGATTTGCTTAGATATTCCATCACTGGTGCAAAGTA GCTGGCCTGCGGTGAAAGCACGGAGGCAGTTTGTGCCGTGCGGGGGCGTT TGCTGTCTCTGTGTCTGCCGTGAACGTTGCGGGCGTGTCGTGCCCACACC CCAGTTTTTTCCGAGTTGTGGCTGGATTCGCCCGAAACTTACCTCTGCAG TGGAAGGGAGGAACGTCTAACTCGACCCCCCTGGTCCTTGGTACTACTAC TTGTATATGGGCGTAGAGTACTTGGCTTGGCGTGTGCTTCGATTTACTTG TGCAGTCTGTGATGAATACTTGTGGGGGGGACATGGCCAGCATGTGCCTT GAACTTCTCCCCAACTATCCGACCGATGCCCAGTTGCCCCTGTTGAGTTC CTCCGCAACTCTCCACCTCCTCTCGCCCCAGCGACACCAACACCACCGCT GCCACCACCACCACCGTCGCCCCGCCCACCACGACAGCAACCCCCTCCTC CTCCTCCTCCTCCTCTTCCTCCTCCTCTTCCCCCCCCTCCTCCTCCTCCT CCTCCAACCTGTGACCCTGCTGCCGCCGCTGCGATTCTGCTCCGACCGGG GTGTGCACGTCCCTGTCTGCAGAAAGGTGGATGACATGTTCAACATCAGC ACGGAACTTGTCATTGTCATGGTCGCCCTGCTCGTCATGGTTTGTGAGTA AAGTACGAGCGTTTTTTGTTCATTTCGTGTGGATTTGGAAACATCAGCAC AGGACTTGTCATTGTCATGGTCGCCCTGCTCGTCATGCTTTGTGAGTGAA GTACTCTACAAGTGTTTGTTGTTCTTTTCAGGTGGATTTGGAAACATCAG CACTGAACTTGTCCTTGTTATGGTCGCCCTGATCGTCCTGGTTTGTGAGT AAAGTACGAAGTACGAGTGTTTTTTGTTCATTTCGTGTGGATTTGGAAAC ATCAGCACGGAACTTGTCATTGTTATGGTCGCACTGCTCCTTGTGGTTTG TGAGTGAAGTACTTCCAGAAGTACGAGTGTTTTTTGTCCGTTTCGTGTGG ATTTGGCCACCCCCCTTGTCTTGGGTGTGTTTGGTCGTGTGGAAGGTGTA GAATATTGCATGGTGACTCGTGTTTCATCAGGCCTGTGATTGTGTGCACT TGCGATACGTGGATGGGCCAACGCGGACATGCACCAAAGCATGGGATGAA ACACACACCAAAGCGCAAGCACGCACATGCAGCGCATAGCTCATGAAGTG CAGCAGACAGCAACATGCGCACACAGTACAGTACACCAACATGCATTGTG TGAGTACTCGTACATATGCACGTGGGGGCATGTATGTCCGCTCCCCCTCA CTTTTGCCCTCCGCCTAGTGGTTTAATCAAGCGCAGCAAATATAACCATG CGCTCGCCCGAACACACACACCCGCACACCAACATGCATTGTACGAGTAC CCGTACTTGAAGAGTACTTCGAAGTACTTGTGCCCGTGGGGGCATGCATG TCCGCTCCCCCTCACTGTTGCCCTCCGCTTAGCGGTGGAGATCCTCGCCG GAATACCTTGACAATGCACGAAAGAGAGTTGACTGCACAATGTCGCATAC CGTAATCGCCGGAGAGATTTTTGACCCGCGGGCCATGTTTCGGGGATATA TTTCTGGCCGGGGAGGTCCTGAATTGTCCCGAAAGCCCTTGGAAAAGTTC CCCCAGGTCCTGAGGGAGATTTTTCCGAGTTTTTGCTTGCGCGAATCCGA CCAGTATTTGGCGAATAAAGTTCTCCTGAAAATTGGCATGGGGGGGCAAC ATCTCTCCGACGATTGCGGTACGCGGATACATGGGGAGGCAACATCTCTC CGACGATTGAGGTACTCGGATACATCAACACAAACACAGGCAGTGACAGA GTAGGCAGAACCACCACACCGCGTACCTGCAGCGGAGAAGTGAACGAACA GGGAGCACCGTGTGAGCGCGAGACCCCTGTACCGCAATCACCACGCACCG TGGTGACACCAGCCTCTTCCCTCTGTTAAATTGGACTTACACACCGAAAC CAGTCGAGCCCGATAGCTATCTACTTATCGATATTCCATCACTGCCTCGC GCTGCTGCCACTCTGTGCCCGTCCAGTTGTGGGGGTACTTAGCGAGCGTG TTTGCGGGCGAAACGCTGGAGAGGTGGATTGTGGAAAACATCACCTTTGT GGGGTCGCCCTTCGTGTTCTGGGTTAGGTGAGTACCGGAGACCCGGCCGA GGGGTGGAGGGGAGAAACATGAGCAGGAGGGGGGGAGGAGGAGGAGGGAG GCGGAGGATGAGAAGGAGGAGGAGGAGGAGGAAGGGGGGAGAGGGAGGGG AAGGGGGGGAGGAGGAGAAGGCGGAGGAGGAGGAGGAGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGGAGGCGGAGGCGACGTG TCAATTCATGCAGAGACTGCAGAGGGCGCCTGCGGGGCCAGTGAATGCAC ACACAAGTCTGCACTGTACTGTACTGTTCTGTGCTGTACTGTACTGTACT GTACTGTCCTGCACCTACTGGAGCACTACTGTACCGTAGGACCGTAGCAT GTACAGCAGCACTCGAGTACTTGGACGCGGAGTGTTGTACTACTTAGCAA CTACAGTACAGTACCGTACACGTGCTTTCTACCAAGCACTGCGTACGATA CTAAGTACTTTGCAGCAGCACCACTGCGCGGTACAGTGCAGTACAGTGCA GCAGACGCAAAGGAACTACTGCACTCCTTACCGTTGTCCTGTACGGTACA TGTGCATGCAGACGCGTGCCTGCAGCACATGCTGCAATGCCGTTGTGTGG AGTGAGGCCGCCACAATGTCGAGAGCCGCTGCTGCTACCGTCGTCACCGC CAACGCTGGCTGCCCCATGCTGCTGCTGCTGCTGCTGCTGCTGCTACCAC CCCCGCCTATGCCACTGCTCCTCCTGCTGCTGCTGCCCCCCCCACCTATG CCACTGCTCCTGCTCCTGCTCCTGCTGCTGCTGCTGCCCCCCCCCGCCAA TTATGCCGCTGCTCCCGCTCTGTCAAGTGTGGTGGAGCCCATGAGGAAGC TGTACTACGACCCCCTGGCCGCGACCAAGCGAAAGTACGCACAGCGGGTC TTGCTCAGCCGCTCCGCCGCCAGGAGGGGCGAAAGCGGGTGAGTCGGATG TTATATGTACTTCGAAGTACAGTACATTAGAAGTCTGATGTGATGTGATG TCACACGACTGTATGTACAGTGCACTAGAGTGTGCACATCTCATCAAATC ACGTCCACATGGGCGATTGGGTGAGTCTGATGTGGTGTGATGCCACACTG CGTACAGTACATGGCTTAGAGCGCGAACACCGCTTCAAATGGCGGAAGCT ACAGCTGACCAGCGAGCCACGAGAGGGAGCAAAGACGAGGAGGATCGTTC GGGTCCAGGGCGTGCACAGAGATGAGAAACATCGTCCGAACGTGAGTACA CACACATTGCGTCAAATCGCCACATGGGCGATTGTTGGGCTGCGCAGCGC GTAACGGCATTTTCCCATACCGGACACCTTCATTCTTAGCAGTTTGTGGC GGGCGGGGGGGGGCGCCCGCGCCCATCGGGGGCGCCAGGATCTGGGCGCG CCAGTCCGATTTCGCCGGACCTCACCCACTCCTGGGCCCCGCAGGGAGGT TTTTGGGGCGCAATCTGCTTGCAAGCGGGCTCCAGAGCATCATTTGTTGG GCGCCTGCAGCGCCCAGCCCCCTTTTTGCTTGGGCGCACGTGGCCCGAAA TTTGTTTTTTTGTGGGGCCGCGCCACCGAAACAAAAGTTGTTGTGGGAAA CACCGGCACGTACTAGGGACGAGAGCGGCGCGTGAGCCTGATGCGATGCA GTCTGAAACGATGCGATGTCATGCGTCATGTAACTCGGTGTCATGCCGTG TAAAATGCGGTGCCATGTTAACACCATTTGGTCCGGCCGAAAATAGGGAA ACCCGCCAGGGTTGTCTGCGACCGCAAAGCCTCAAAAACAACAGGACCGG GGGAAACCGCCGGGTTTGTCTGCGAGCGCAGTCGAGCTTCCAACCACGTT TTTGATGTCCCGCTGAGAAGGGCGGGATTTCTTGGCCCCTTTCCTTGCAC GCTGGCACGAAAGCCTCGTTCCCCACCCTGGGTTTTGGGCTCCCGTTTCT GGTCGTTCCGGCCGTTGATTGGTTGAGGTCGCGAGCAACGCCTGATAAAG TTTAGGTGCCGCCAGGTTTACCGGCGGGCTTGCTCGGCCCCAAGGGAAGA GCGTGCCTAATTATGGTACTGTAAGTACTGCAGAACTGCACATTGCTTGT CAGACCACCAAGTGCCTAGAGTGCGCATCGCATCACATCAAAACACACGA CATCACATCGAAACACACGACATCACATCGAAACACACGACATCACATCA AAACACACGGCATCACATCGAAACACACGACATCACATCGAAGTCACATC ACAACACACGACATCACATCGAAACACACGACATCACATCGAGACACACG ACATCACATCGAGACACACGGCATCACATCGAAACACACGACCTCACATC AAAACACACGACATCACATCAAAACACATGACATCACATCAAAACACACG ACATCACATCAAAACACACGACATCACATCAAAACACATGACATCACATC AAAACACACCACATCACATCAAAACACACGACGCGCGCCATCACGACTCT CGGTGTCCTGATGCACCCGGCGGGCCGAAGCCGGTACAAAAAAAAAAAAA AAAACGCTTCACCCCAACCCTCCTGTGGGAAGAACGCGCTCGTCGGAGAG AGAGAGAGAGGGAGAGATGGGGGGAAGAGAGAGAGAGAGCGAGAGAGAGA GAGAGGGAGAGGGAGAGGGAGCGGGAGGGAGCGGGAGGGAGCGGGAGGGA GCGGGAGGGGGAGGGAGAGGGAGAGGGAGAGAGAGAGAGAGAGGAAGTCC TCGTAAGTAGTGCAAGTACAATGCGACGAGACAATACCATGCGATAACGT GATGACGCACAAATAGAGGAAGGCACCCAACTGGCCCGAAACCGCCCGTA CAACGAGGAGAATAACCGTAACCCAACCCTCCCCAGCCTCGGAAGTCCAG CCCACTGTACAGCAGCACATGCAACCCGAAACCACCGCCCTGTTAACCCT TTGCAAACGACGGGGCGCTCACCTTTCGCCCCACTAAACTCCCACTTCAA AGTACAGTTTAGTGTCCCATCGTCAAATATGGGCTAGGCAGATATCAACC GTTTACGGACGACGGGGCGCTCATCCGACACTCAAATCATGTACCACTGT AGAAGTTTAGCGTCCTACAAATAGTTGAATGTCCTCAAAGCGTCTACCTC TTGTGCCCTAACCAGCCCCTTGCCGTGCCCCCCCCCGCCCCGCAACTAAG GGGCTCAAGCACCCACCAGGAGAGCAATGCTACCGTGAGCAACGACGACG CTCTAGACTCACAGCAGGAGGTGAGCCAAGACATGATATCGACCAGTAGA TAGTTATCGGGCTTGACGATTTTGTGGGTGGCGTTACTAACTAATTGGAT TTAGTATGGGTCAAACTATCGAATATCGACTATCGATAGCAAGTAGATTG GTGCTTTCGATAAATACTGAAGTAGGTTGATTTGCTTAGGTATTCCATCA CTGAAGGCAAGAGACCAAGACCAGAAGAGAAGAGAAGAGCAGAAGAGTTA TCGCGGGGGAAGGAAGAGCGATAATGCCCCCGCCGGCATGAAAACCCGGC CACCGCAAAAGGAGAACAAGGATTTCTACTGCAGGCTGTCGAGAGAACAA GGAACGCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAACGAAATGG TTGCCTGGAAATGCGACCGCCGTGAACGGAGGAGGAAAGATTCGCTCGGT CGGTCGGTCGGCCTCGAAGGCCCATGAAGAAAAAATGATAAAACCCCCCC CCCGTGGCACGAACGTTCGATTCGACCACCGACTTTGTGCGGTATGTTTG TTTGACTCTGCAGCAGGCTGATCGACTGCGGGGCCGGGGCGGCGGGGGGC ACGGGCTGTGTTTCTTTACGAGCGCAGTATTCCTTAATGTTTTGTTCTGT TTCACTGTCTAAGGGCTTCTGGTGAGGTCCCGAGTTTGGGAAAGGGCCTG GGATTCGCATGCCATCGAAAATAATCAAAAACAGTATCCGCTTTGAAGTT CCGAGCCCAAATAAGCTGCCGTAGCCAACTTTTGGACATGGCCAAAATTT AGGGTTAGGTTAGGTGAACAGTGTACTGTACGGGTACTGGTGGTTGGGCC TGGCACTGAGCGGCGCAACCTCTGCCAGCAGTACCAGGCTGCGCTGGGCC CGTGTGCAGCACAACCGTGGTGCAGTGAGGTGGGCTGGCTTGGTTTATGC CTCGCGTACAAGGAGGGTGTGCCAACGCCTGCCGCGTTCTGCGCTATCAC TACGTACTTAGAAATACCTACCAGGGTTGGCACTTAGAGGTTAGTTAGGC TCTATTTAGTCTTCATTTTAGGTCGAATGTTCCCCAATTACCTCTAGTTA AGGCCCGAAAAGGGCACCACTTAGGGGTCAAGTGCCAACTGGAATCTGCA ATCGGTCGCCTCCCAGTGCTGTGACTGAGCGTGCACTGTACAGTGCCTAC AGTAGAGTACTGGAGTTGAAAACGCCTTCCTACTGCTATAGTAGGGAGTT GTTGCAACCCTCGGAAGGCTGGAGTTGTCGTGCAGAAGGGGTCCAAGGTG CCCTTGAGGTGCGGATGTTTGCCGCCACGTGCCGCAGCAAATCGCTCGAG GCTTACAATATGCTTGGCCGTATGTACCGAAGTACTCTACTCTTGAGATA CCAGGGTTGGCACTTCGAGGTTAATTAGGGCCTATTTAGCCTTCATTGTA GGTCTAATTACCCCTAATTACCTCTAATCAAGGGCCTAGAAGGGCACCAC TTAGGGGTTAAGTGCCAACCCTGTGCAATATCACTCTTTGGGGGGGAAGT AACACGAGCATGCCCCCCCTCGCTCCTGCCCCTATGTACACTGCCTGTGG CAGGTGTAGGACTTTGAGCGGTTGGCGTCCACGCCCATGCTGGCAGCGGC CTTTGAGCGCTTTGCCCAGAAGGCCCTGTGCCAGGAGTCTGTGCTCTTCC TCGCGGAAGTGTCCAGGTGAGCACTCCTGTAAGTAGATTTGGGAGACTTG GGAGATGAAAGCCCTGTGCCGGGAGTCCGTGAGTGACCGGGTGAGCAAGG GGGTCTTGCAATGGGTTTGGAATGTGACAATCGGAGATTTGGGAAACGCA TGTCCTCCCCGCGAAGTTTTGTGCGGTCTGCGCTGGACAGTTCATGCTGC TTGCCTATACGAGTGGCATACTGCATTAGAGTACTAAGGCTGTCAGGTGC TCAGTACAGTTGACTTGGGATTGTACTGGTAGAGTACTTCCAAGTACTTG CAAGTGCTTGCCCTTATACCCGAGTACAGCAATCGAGTACTACTGTACTG CATACAGTAGTACTTCCGGAAGTGCTACTGTAGTACTAGTGCTACTGTAG TAGTACCCTACAACGCTATTGTAATCGCGGTACTACTACGGTAGTAGTAT AGTTTTGCTGTATCAACAGGAACAACACAGGGCGAGGTGCAGGCCACGTC GCTACAGACCTCAGCAGTGGCCCTTCCTTACAGCTCGCCAGGGGAAAGCG GTATGCGGTTTGCTGTACTGTAGTGTAGTCAACTACAGTACAATAGCAAT TGAGAGTTGAGGTGAGCGTACCGTGGTGTAGTCCTCGCCGCACTCGGAAG GGAGTACTTTGAAGTACAAAGTGTGTAGGCATGTACTGGTGACTGCTTGT TATAGGTTGTCAACTGCTATTTGAAGTGCACTTGTGCCTCGTCTTGTATT TCTGTACGCGTACACGACTCCCATTTTAGCCATGCATTTGGTCAAATATC CCAACAAGAAAAGAACTTTCAAAAATCAGGTCCAGTTTGAAAACAATTTA ATTCCAAATTTTAATTATTTTTCATGCTCAACAGGTACGCCGAAGGGGAC TACTCCAGCGCGCAGGCCCGCAAGACGGACGGCGAGGCCAGCCAGTTCGA TGCCTTCTGCTACACCACTACGACCTTTGTGTGCAACGGCGCACCCGAGG AGGTCAACATCAGGCAAGTGCTCGCGTACAGTAGAAGGGCAGCACAGTGC AGTACAACACAGTACAGTACATCACAGTACAGTACGAGGACGTCAATATC AGGCATGTGCTCGAGTACATACAATAGGAGGGCAGCACAGTGCAGTACAA CACAGTGCAGTACAACACAGTACAGTACAGTACAGTACAGTACAGTACAA CACAGTCAGTACAGTACCGTACAAGTACTGTACCGTAGAGTACAGCACAG CCAGCCAGTTCGACGCCTTCTGCTACACCACTACCACCGTTGTGCTAAAT GGCGCACCCGAGGAGGTCAATATCAGGCGAGAGGTCGTGGCACATAGTAC CGCGCAGCTTGAGTTCCCCTCTATCTTGGTTTTTTTGTGGGTGATTAGCT GTTGTCATGGCTCGCGAGTTCAGGGCCCCGTCTGTGCCAAACTGGGACCA CACCAGAAGAGGTAGCCATTTTTTCACTCGGTAATCTGATGTGATGTGAT GTGCACTCCAATTTACTTAGTGTGACATCACATCACATCACATCGCATCA AATTTGGGACCTCGCCAATAGAGTTCGCCCTGTTTTTCACTCGGTAGCAT CATGTGATGTGTCGTGTGATGTGCACTCTACAAGAATTTAGCATTTGTCC GTTGCCAGTACTTGGGGTCCATTTCATTGGTCCGACGTTTCACCTTGATT GCGTATCTTTTGTCCATGGTTGAGCGGATGCGGATGCGGCTAGCCGCTCA CGAGCATGCCCCCTAACCCCGCCTCGGCCGCAGTGACGCGGACAAGAGGC GTATTCTGGATTGCTACGGCGGCGGGTGGAACGCTTTTTGGGAGCTTCCC AGCAACGAGCACAGGAGGTAGGTGACTTTGAACTCTTCTTCCGAGGACAC TGCTTTAACTCTTTTTCAAAGGGCACTGCTTTAACTCTTCTTCCAAGGAC ACTGCTTTAACTCTTCTTCCCAAGGACACTGCTTTTAGCTCTTCGTGAAG GCGGGTGAAAGGAAGGGCTTCCGGGGGCGAGGCCCCGAACAGTCTCGCGT AGAGTAGAGACACCTCTTCTTTGCCACTCGCTTGCTTGTCTTCTTGCAAT AAATGCACCACGCGCTGCTGACCGTGTTGCTGGCGCCCTGGCGGCGCCCG CGCGCCCGCAGTCTGCCTGCCCCCCCAGGGTTGGCACTTAACCCCTAAGT GGTGCCCGCTTAGGCCCTTAATTAGACGTAGTATCAGGAATAACATGGGC CGATGTGCGGGCCACGTCACTAGAGACCTCAGCAGTGGCCCTTCCTTACA GAGGAATGAAGACTAATTGGGCCCTAATTAGCCCCTAAGTGTCAACCCTG TGCCCCCCCGCTGCGATTGTGCAGGCTCATCTTCGATCAAGCATACGTGG AGGTGCGCAGCATGTTGGAAGCCAACCTGCTCCGGCGCTTCATGAGTACC GAGGAGTTCAAGGAAGTGCGGGCGCGGCGAGAGACTGTGACCGCTATGGC CGACTCGCCAACCAGAAACAACTCCGTGTGATTGATGTCCGGCTTTGGCT CGGAGTTTTTTTTTTTTCCACCGTGCCCGAAAGAGAAAGATTCTCACGCT CCCGCGCACACAATTAATGCAGCATAAGTACTCGCAGTATAGAAACTCCG TGTGGTGCCCGGTTTTGGCTCTGATTGTTTTTCCACAGTGCCCTAAAGAG AAAGATTCTCAGGCTCCCGCGCACACAATTCGTGCAGTATGAGCACACGT ACTATAGAAACTCCATGTGATGCCCGGTTTTTGCTCGGAGCTTTGTTCCA CAGCACGGCAGTACAGTGCGTATGCCCGGGCCGGGAGGTTGGTGTGGGGC ATGGCCGGTGTACCCTGGCACGGGCTCGACATAATATAGGTGTTGTGTAA CAAGGTGTGTTAGCAATCGTCCGCTGCTTGGAAGGGCACGTGCTCCAGCG GCGCGGTTTGGCGCTTGCGGGTGGTACGGCATCTGCTTCTGTTTTGTGTA AAGCATGCGGTTTCGAGTGCAGCACTACGTAGTACGGTATCAGTACTGTA GAGTACGTACACTGGGGTAGCGTGCCTTGGGGGTTTTACGGCATCTGCTT GTGTTTGTGTACAGCATGCGCTTTCGAGTGTACAGTAGGTACTCTGGGGT AATGGGCCTTGGGGGTGTTAATGCTGTTGTTTTGTGTGCAGCATGCGCTT TATGTCTGCTTTGAAGAGTGGCGATTATGATCATATATTAGTTTACTACA GTACTACCAGGAGGGGGGGGAGGTTTCGGGCCTGCAGTGCCTGAGCCTCG CGGCCCGGTGAGTCCGAGCCGACCCGCCCGCCGCCCGTGGCTTCCCACTG GCGGCGCTCCACTCCCCCCCCTGACAACACAAAGAAAAAAG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig90:130046..147786+

>mRNA_S-ischiensis_contig90.20854.1 ID=mRNA_S-ischiensis_contig90.20854.1|Name=mRNA_S-ischiensis_contig90.20854.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1242bp|location=Sequence derived from alignment at S-ischiensis_contig90:130046..147786+ (Schizocladia ischiensis KU_0333)
ATGCTGCAGTTCTGCAAGGCGCGATGGGTGCTCGACATACGGACACGATG
CTGCAGTTCTGCAAGGCGCGATGGGTGCTCGACATACGGACACGATCTGC
CCACTTGGTGATGATGGCGGGAGCAGCGTCACTGTTGAACCTTCTGACGC
ACATCAACTTCTCTTGCGACAAGATATGGGGCAAGTCTGTGGACTGGTTC
TGGGTCAGCTTGATCTGCCCACTTGGTGATGATGGCGGGAGCAGCGTCAC
TGTTGAACCTTCTGACGCACATCAACTTCTCTTGCGACAAGATATGGGGC
AAGTCTGTGGACTGGTTCTGGGTCAGCTTGCTTCTCTTCTTCATAACGCC
GGTGTACACGGGCAGCTACATTGCGCGTTCCATGCGGCTGGCCGTGGTGT
TCCGACAGAAGTGGCGCAAGAAGGTGCCCTGGCTCATACCGCTTCTCTTC
TTCATAACGCCGGTGTACACGGGCAGCTACATTGCGCGTTCCATGCGGCT
GGCCGTGGTGTTCCGACAGAAGTGGCGCAAGAAGGTGCCCTGGCTCATAC
CGGAGGTGAACTACGTCTATGGCCTGGTGGCGGCTGGCGTGCTGGCTCTG
TCCGTCCCTTTCTACTCCAATGCGGAGCTGGAAGTATGGAGGTGAACTAC
GTCTATGGCCTGGTGGCGGCTGGCGTGCTGGCTCTGTCCGTCCCTTTCTA
CTCCAATGCGGAGCTGGAAGTATGTGACAGAGCGCCCAAGCAGGTGGCCA
CGATCCAGACCATCACCGCCCTCCTCACCATCGTCCTGGCCGGCCTCTAC
CCCCTCATCAGTGACAGAGCGCCCAAGCAGGTGGCCACGATCCAGACCAT
CACCGCCCTCCTCACCATCGTCCTGGCCGGCCTCTACCCCCTCATCAGAA
AGGTGGATGACATGTTCAACATCAGCACGGAACTTGTCATTGTCATGGTC
GCCCTGCTCGTCATGGTTTAAAGGTGGATGACATGTTCAACATCAGCACG
GAACTTGTCATTGTCATGGTCGCCCTGCTCGTCATGGTTTTTGTGGGGGT
ACTTAGCGAGCGTGTTTGCGGGCGAAACGCTGGAGAGGTGGATTGTGGAA
AACATCACCTTTGTGGGGTCGCCCTTCGTGTTCTGGGTTAGTTGTGGGGG
TACTTAGCGAGCGTGTTTGCGGGCGAAACGCTGGAGAGGTGGATTGTGGA
AAACATCACCTTTGTGGGGTCGCCCTTCGTGTTCTGGGTTAG
back to top