mRNA_S-ischiensis_contig90.20844.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig90.20844.1
Unique NamemRNA_S-ischiensis_contig90.20844.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A7S0XXS4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XXS4_HEMAN)

HSP 1 Score: 215 bits (548), Expect = 4.080e-63
Identity = 105/202 (51.98%), Postives = 136/202 (67.33%), Query Frame = 3 
Query:  219 GQDPGEMFDVYFPPSKGLAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQ--------DPEFIPRPKHYTEAFFRALR 800
            GQD GE+FD+Y  P    A   EP K  G  K R  VH +G+WHRAVH+WL+  +GE VLQ+RS  KDTFP  WDVSVGGH+TSGDS + T +KET EELG+    ++   L TVATS +G++P  GDF CNEFKD++LL+Y+G LE L+F+D+EVSDVK VP   +E  ++AQ        D  ++PRP  Y +  F A+R
Sbjct:   93 GQDLGELFDLYHAPDAEFAASGEPRK-TGKNKERGKVHRDGDWHRAVHVWLYTPQGEFVLQQRSEKKDTFPGKWDVSVGGHVTSGDSVMHTVLKETQEELGVEVTEAELERLPTVATSLKGNSPKQGDFTCNEFKDIFLLKYSGTLEGLNFADNEVSDVKLVPWQEVEKDMLAQVSPDGEPTDGAYVPRPMSYIDILFDAMR 293
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A7S0NEA1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NEA1_9CRYP)

HSP 1 Score: 211 bits (538), Expect = 3.100e-62
Identity = 102/210 (48.57%), Postives = 141/210 (67.14%), Query Frame = 3 
Query:  210 AVQGQDPGEMFDVYFPPSKGLAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQ--------DPEFIPRPKHYTEAFFRALRREVEA 815
            A  GQD  E+FDVY PP+   +   EP K AGI K R++VH++G+WHRA+H+WL++ +G L++Q+RS  KDTFP  WDVS+ GH++SGDS +ETA+KE  EELGL  +     +L T+ATS RGS+P  GDF+CNE+KD++LL+Y G LE L F+ +EV  V  V    L+ +L  Q        D  +IPRP+HY +  F ALR  + +
Sbjct:   49 AAPGQDLAELFDVYKPPASISSFRGEPEK-AGISKQRKLVHTQGDWHRAIHLWLYDLQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKEAKEELGLDVEEEQLEYLGTIATSMRGSSPITGDFLCNEYKDIFLLKYDGSLEDLKFAPEEVQAVSRVGWKTLQEQLEQQIGPEQQSVDGPYIPRPRHYLDLLFGALRERIRS 257
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: L1JKA1_GUITC (Nudix hydrolase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JKA1_GUITC)

HSP 1 Score: 206 bits (525), Expect = 2.580e-60
Identity = 104/223 (46.64%), Postives = 147/223 (65.92%), Query Frame = 3 
Query:  168 MRAGFKMLA-SVAEPAVQGQDPGEMFDVYFPPSKGLAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQ--------DPEFIPRPKHYTEAFFRALRREV 809
            +R+ F+  A S+A P   GQD  E+FDVY PPS       EP + AGI + R++VH++G+WHRA+HIWL++ +G L++Q+RS  KDTFP  WDVS+ GH++SGDS +ETA+KE+ EELGL  +  +  +L T+ATS  GS+P  GDF+CNE+KD++LL+Y G L+ L F+ +EV  V  V    L  +L  Q        D  +IPRP+HY +  F AL   +
Sbjct:   36 LRSAFRTRALSMAAP---GQDLSELFDVYKPPSSIPGFRGEPER-AGISRQRKLVHTQGDWHRAIHIWLYDGQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKESKEELGLDIKKEELEYLGTIATSMAGSSPITGDFLCNEYKDIFLLKYEGHLDDLKFAPEEVQAVSRVDWRSLRQQLEEQIGPDGQSIDGRYIPRPRHYMDLLFGALEERI 254
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A7S0QHM2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHM2_9CRYP)

HSP 1 Score: 202 bits (514), Expect = 2.220e-58
Identity = 104/221 (47.06%), Postives = 133/221 (60.18%), Query Frame = 3 
Query:  189 LASVAEPAVQGQDPGEMFDVYFPPSKGLAVLDEPPKP--AGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQ--------DPEFIPRPKHYTEAFFRALRREVEACR 821
            L  +  P   GQ+ GE+FD Y  P            P  +G   PR+ VH+ G WHRAVHIWL+N KG+++LQKRS  KDTFP+ WDVSVGGH+++GD+ +E A++ET EELGL     D  F+ TVAT+  GS+   G F CNE+KDL+L RY G  EAL ++ DEV+ V W   D +EA L  Q        D   I RP +Y +A F ALRR   A R
Sbjct:   59 LRMLTAPVHLGQNLGELFDTYLEPDASFFTAKGGVNPVLSGKSLPRKQVHATGTWHRAVHIWLYNSKGQILLQKRSDEKDTFPSKWDVSVGGHLSAGDTVVEAALRETEEELGLKIGEGDLAFVATVATTVAGSSAKQGAFTCNEYKDLFLARYDGPAEALVYAPDEVAGVAWRDADEVEAALRKQIGPAGEQLDGPLIARPAYYLDALFPALRRAATAAR 279
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: D7G0X4_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 2.730e-54
Identity = 91/143 (63.64%), Postives = 107/143 (74.83%), Query Frame = 3 
Query:  381 KGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRALRREV 809
            +GELVLQKRS  KDTFP MWDVSVGGH T+G+ SLETAIKET EELGLSC  S   F+ TVAT+A+GST  HGDFVCNE+KD+YLLR+ G ++ L FS  EV DVK VPM  L+    AQDP +IPRP +Y E  F+AL   +
Sbjct:   33 QGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETDEELGLSCDESSLRFVCTVATTAKGSTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEAL 175
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A6T7KLM2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7KLM2_9EUKA)

HSP 1 Score: 176 bits (445), Expect = 9.470e-49
Identity = 90/211 (42.65%), Postives = 126/211 (59.72%), Query Frame = 3 
Query:  183 KMLASVAEPAVQGQDPGEMFDVYFPPSKGLAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDF--VFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGD---LEALSFSDDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRALR 800
            ++ A+      +GQD GE+F++Y PPS   A L  PP   G++KPR  VH++G+WHR+VH+WL    G L+LQ+RS +KDT P MWDVS  GH+T+GD SL TA KE  EELGL    +      + T+ + ARG+T  HG F+CNE +D+YLL+   +   + +LS    EV   + V    +       +P F+PR  HY  A  +ALR
Sbjct:   24 RISAACTNVNAEGQDLGEIFELYSPPSSLTAPLSMPPTELGVQKPRGQVHADGDWHRSVHVWLSTSDGRLLLQRRSQYKDTHPGMWDVSCAGHITAGDDSLTTARKELEEELGLVIDETTLRRALVCTLPSCARGATARHGPFLCNELQDVYLLQRPAEQLEVGSLSLEAGEVEATELVDAHEVLRAWEQAEPTFVPRQPHYVHALRQALR 234
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A835YMT5_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMT5_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.560e-48
Identity = 79/140 (56.43%), Postives = 104/140 (74.29%), Query Frame = 3 
Query:  381 KGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRALR 800
            +GEL++Q+RS  KDT+P MWDVSVGGHMT+GD SL TA KET+EELG++   +D  FLFT+ATSA+GST  HG+F CNE+KD+Y+LRY G L  + FS+ EV +V+W P D +E +L + D  +IPRP  Y    F A+R
Sbjct:   15 QGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAVR 154
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BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A7S4UN69_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UN69_9DINO)

HSP 1 Score: 172 bits (437), Expect = 3.500e-47
Identity = 90/221 (40.72%), Postives = 131/221 (59.28%), Query Frame = 3 
Query:  165 PMRAGFKMLASVAEPAV----QGQDPGEMFDVYFPPSKG----LAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSFS--DDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRAL 797
            P R   +  A+   P      +GQD  E+FD+  PP +G    L      P   G  K RR VH +G+WHR+VH+WL +++G+L+LQ+RS HKDT P  WDVS  GH+ +GD+ LETA++E  EELGL+   S    LFT+A SA G+T  HG F CNE++++YLLR  G   +  +S  + EV++++  P+   E  L     +++PR + Y +A   AL
Sbjct:   33 PARLRARSAAAAGPPGPAEFPEGQDLDELFDLCEPPPEGAPGGLLAPGAGPALTGATKQRRWVHRDGDWHRSVHVWLLDEEGDLLLQRRSKHKDTHPGCWDVSCAGHIGAGDAGLETAVRELEEELGLAVPLSALKHLFTIAASASGATERHGPFRCNEYQEVYLLRVFGAHASRGYSPAEGEVAELRSEPIAETERSLRTGAADYVPRSREYIDALVGAL 253
[Close]
BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A7S2H2W5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2W5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 7.050e-44
Identity = 85/206 (41.26%), Postives = 125/206 (60.68%), Query Frame = 3 
Query:  219 GQDPGEMFDVY----FPPS----KGLAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTGDLEALSF--SDDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRALRRE 806
            GQDP E+FDV     FPPS    KG        +  G  K R +VH +G+WHRAVH+WL +  G+++LQ+RS  KDT PN+WDVSV GH+ +GD  LETA++E  EE+G+   A     LF + +S  G T  HG + CNE ++++L+R     + +++     EVS  +   + + E+ L++ D E++PR + Y EAFF A RR+
Sbjct:   37 GQDPSELFDVCKHPGFPPSSVLEKGFGA-----ETTGAVKARGLVHRDGDWHRAVHVWLVDPAGDVLLQQRSADKDTNPNLWDVSVAGHIGAGDEGLETAVREVEEEMGIGIDADKLQHLFNIVSSFAGETK-HGPYQCNEIQEVFLVRLAELHQDMAYVAHAGEVSAWRTEKLSITESALLSGDSEYVPRSRAYIEAFFAAARRK 236
[Close]
BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Match: A0A7S4B8T2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B8T2_CHRCT)

HSP 1 Score: 166 bits (419), Expect = 1.170e-43
Identity = 88/231 (38.10%), Postives = 129/231 (55.84%), Query Frame = 3 
Query:  150 RTARHPMRAGFKMLASVAEPAVQGQDPGEMFDVYFPP-SKGLAVLDEPPKPAGIRKPRRVVHSEGEWHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETAIKETSEELGLSCQASDF--VFLFTVATSARGSTPGHGDFVCNEFKDLYLLRYTG---DLEALSFSDDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRALRREVEACRS 824
            R AR        +    A+    GQD GE F++Y  P ++   +L  PP P G+RK R  VH +G+WHR+VH+WL ++ G L+LQ+RS HKDT P +WDVS  GH+++GD SL+TA KE  EELG +   ++    F+ T A++ RG T  HG F CNE++D+YL        D + L     EV+ V+ +    L +    +D +F+PR   Y      A+ +  +A  S
Sbjct:  114 RLARQSWAPSATVRMQAADANALGQDLGEQFELYAGPLNEAPTILSAPPTPLGVRKARGEVHRDGDWHRSVHVWLGDEMGRLLLQRRSEHKDTHPGLWDVSCAGHISAGDGSLDTAQKELEEELGFAVGLAELEACFVGTFASTMRGITAKHGAFECNEYQDIYLFITPSASLDADKLVLGAGEVAGVQMIDATELISAWEREDAQFVPRSALYAHTLRAAVDKTAKAATS 344
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0XXS4_HEMAN4.080e-6351.98Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0NEA1_9CRYP3.100e-6248.57Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1JKA1_GUITC2.580e-6046.64Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S0QHM2_9CRYP2.220e-5847.06Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
D7G0X4_ECTSI2.730e-5463.64Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6T7KLM2_9EUKA9.470e-4942.65Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A835YMT5_9STRA2.560e-4856.43NUDIX hydrolase domain-like protein n=1 Tax=Tribon... [more]
A0A7S4UN69_9DINO3.500e-4740.72Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S2H2W5_9STRA7.050e-4441.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4B8T2_CHRCT1.170e-4338.10Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:21095..27906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score177.2
Seed ortholog evalue1e-41
Seed eggNOG ortholog296587.XP_002505779.1
GOsGO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0016787,GO:0019538,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.NUDIX domain
EggNOG OGs2QT89@2759,34MH7@3041,37JK2@33090,COG0494@1
COG Functional cat.L
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNUDIX hydrolase domain
Ec32 orthologEc-23_001950.1
Exons7
Model size1355
Cds size795
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817408.1837447-UTR-S-ischiensis_contig90:21094..216101622817408.1837447-UTR-S-ischiensis_contig90:21094..21610Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 21095..21610 -
1695741092.3256404-UTR-S-ischiensis_contig90:21094..216101695741092.3256404-UTR-S-ischiensis_contig90:21094..21610Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 21095..21610 -
1622817408.2769332-UTR-S-ischiensis_contig90:27862..279061622817408.2769332-UTR-S-ischiensis_contig90:27862..27906Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 27863..27906 -
1695741092.419229-UTR-S-ischiensis_contig90:27862..279061695741092.419229-UTR-S-ischiensis_contig90:27862..27906Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 27863..27906 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817408.1961591-CDS-S-ischiensis_contig90:21610..217091622817408.1961591-CDS-S-ischiensis_contig90:21610..21709Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 21611..21709 -
1695741092.3398786-CDS-S-ischiensis_contig90:21610..217091695741092.3398786-CDS-S-ischiensis_contig90:21610..21709Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 21611..21709 -
1622817408.207508-CDS-S-ischiensis_contig90:23181..232981622817408.207508-CDS-S-ischiensis_contig90:23181..23298Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 23182..23298 -
1695741092.351145-CDS-S-ischiensis_contig90:23181..232981695741092.351145-CDS-S-ischiensis_contig90:23181..23298Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 23182..23298 -
1622817408.21937-CDS-S-ischiensis_contig90:24770..248601622817408.21937-CDS-S-ischiensis_contig90:24770..24860Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 24771..24860 -
1695741092.3643658-CDS-S-ischiensis_contig90:24770..248601695741092.3643658-CDS-S-ischiensis_contig90:24770..24860Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 24771..24860 -
1622817408.230894-CDS-S-ischiensis_contig90:26315..264651622817408.230894-CDS-S-ischiensis_contig90:26315..26465Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 26316..26465 -
1695741092.3747947-CDS-S-ischiensis_contig90:26315..264651695741092.3747947-CDS-S-ischiensis_contig90:26315..26465Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 26316..26465 -
1622817408.243592-CDS-S-ischiensis_contig90:26719..267561622817408.243592-CDS-S-ischiensis_contig90:26719..26756Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 26720..26756 -
1695741092.3852394-CDS-S-ischiensis_contig90:26719..267561695741092.3852394-CDS-S-ischiensis_contig90:26719..26756Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 26720..26756 -
1622817408.2553926-CDS-S-ischiensis_contig90:27158..273191622817408.2553926-CDS-S-ischiensis_contig90:27158..27319Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 27159..27319 -
1695741092.399071-CDS-S-ischiensis_contig90:27158..273191695741092.399071-CDS-S-ischiensis_contig90:27158..27319Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 27159..27319 -
1622817408.266245-CDS-S-ischiensis_contig90:27721..278621622817408.266245-CDS-S-ischiensis_contig90:27721..27862Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 27722..27862 -
1695741092.4078135-CDS-S-ischiensis_contig90:27721..278621695741092.4078135-CDS-S-ischiensis_contig90:27721..27862Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 27722..27862 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20844.1prot_S-ischiensis_contig90.20844.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig90 21611..27862 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig90.20844.1

>prot_S-ischiensis_contig90.20844.1 ID=prot_S-ischiensis_contig90.20844.1|Name=mRNA_S-ischiensis_contig90.20844.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=265bp
MRLAAALLSALPAPAWGFVPAVGAWCNSGPELCARRTARHPMRAGFKMLA
SVAEPAVQGQDPGEMFDVYFPPSKGLAVLDEPPKPAGIRKPRRVVHSEGE
WHRAVHIWLFNDKGELVLQKRSPHKDTFPNMWDVSVGGHMTSGDSSLETA
IKETSEELGLSCQASDFVFLFTVATSARGSTPGHGDFVCNEFKDLYLLRY
TGDLEALSFSDDEVSDVKWVPMDVLEAKLIAQDPEFIPRPKHYTEAFFRA
LRREVEACRSTSTE*
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mRNA from alignment at S-ischiensis_contig90:21095..27906-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig90.20844.1 ID=mRNA_S-ischiensis_contig90.20844.1|Name=mRNA_S-ischiensis_contig90.20844.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6812bp|location=Sequence derived from alignment at S-ischiensis_contig90:21095..27906- (Schizocladia ischiensis KU_0333)
GTTGTTACCCGGACAACACGCGGCATCCTTGCTTCCTAGGAACGATGAGA
CTGGCGGCTGCGCTCTTGTCAGCCTTGCCTGCCCCCGCCTGGGGCTTCGT
CCCAGCTGTTGGGGCGTGGTGCAACTCGGGGCCTGAGCTTTGTGCGCGCC
GTACTGCACGGCACCCCATGAGGGCTGGCTTCAAGGTGGGCCTTCAGCTT
ACATACTTCCAAGTATGGTTCAGGCCAGAGTAGTACTTGCCTGCATTGCC
CTGCAATCCCCTACCGTATCTGCTGCGGGCGATTCCCCCGTGAGGGCTGG
CTTCAATGTGGGCCTTCATGTGTATGTTTTGACGTACGATCCAGGTTAGA
ATAGTACCAGCACTTGCCTGCACAACTTCGAACCCCCTACCGTTTTTGCT
GCAGGCCATTGCAGTGCAGATGTACTTAATTTCCATGCACACGCTCTGAC
GGAATTTACTAAACACTTGGAGCCACGGCTGTCCTTAGCTCCAAGTGACT
CAGTATGTTCAACGTGCAAAGAACCATGCGGCGTGCACTAAACAATGATG
GCTGAACATTTGGTCGTGAAATATGCATGTTTGGCAGATGCTGGCTTCTG
TGGCGGAGCCTGCAGTGCAGGGGCAGGACCCGGGGGAGATGTTTGACGTT
TACTTTCCGCCATCCAAAGGCCTGGCCGTTCTCGACGAGCCCCCCAAGCC
TGCTGGCATCCGCAAGCCACGGAGGGTGGTGCACAGTGAGGGCGAATGGT
AGGTTTTGCGCCAAACAGGGGGAGCATGTTGCTCTAGTAGTAAGCGACCG
AGGCGACGGTGTCACCTTTTCGCTGCGAACTGTGGCTACGATGCATGTAC
AGTACCATGTGCTGTTCCACACCTGGTCCACATAGAATCCGCTGTGCGGA
TGCATGTGCTTGAGACACCTCCGGGCTCCGGTATGCTTGCGATTGTCCCA
GAAGGTCTACACAACACCTTCCGTGCCCAACGGCCCTCCACATGCTTCGA
AGTTTTCTTCTCCTCTACTGTGTGGTGATGGTACTTTACAGACTGTTGGC
GTGCTTCTCAGAGCCATGCGTTGCTGTGCAGTACACACACGCCTACTGTA
CTCAAGATTTTTTCATTTGTTACCAACTCGCCCGCGCGTGCAACCCGCAG
GCACCGGGCCGTGCACATCTGGCTCTTCAACGACAAGGTGCGTGGACACC
GTAGTTGTCTGTAAGTACTGTGCGTGCTTCCGAGCACATAACATGCAATT
GCGGTTGCACGCTCCCCATTTGCCGCAGCCAGCGTAGCCCAAGCCTCCGT
CCTGACCTCCTTGCCGGGCAGGGAGGGCTGGTCCTGCAGAAACGCTCTCC
TTTCAAGGACACCTTCCCCAACATGTGGGACGTGAGTGTCGTGTCGGGGG
GTTAACCCTAACCCTGACCTAGCCCTAACCTTGCCGGGCAGGGAGAGCTG
GTCCTGCAGAAGCGCTCTCCTCACAAGGACACCTTCCCCAACATGTGGGA
CGTGAGTGTCGGGGGGCACATGACCAGCGGGGACAGCAGCCTGGAGACGG
CCATAAAGGAGACTAGCGAGGAGCTTGGCCTATCCTGCCAGGTACAGCAC
TCTACTGTACTGTACATGTACAGTACAGGCTACGTATTTCCTACCGCTTG
AGCACATTACTACGAGTAGTTGCAATGGATATTTAGTACTCGTAGTAGTA
CGAGTACTATATGAGTACGAAGTATGACTGCAGCCTGGAGACCGCCATAC
AGGAGACTAGTGAGGAGCTTGGCCTATCGTGCCAGGTACCCTAGAGCTAC
TCTACTGCACGGGTACGTACCTAGCGCTTGAGCACTGTACTACTGTAGTA
GTTGCACTAGGTATATGTATATGTATGTGTTTGACAGCAGCCTGGAGACG
GCCGTGAAGGAGACCAGCGAGGAGCTTGGCCTATCGTGCCAGGTACCGTA
CTGTACTCTGCTTTACTGTACAGTGCACGTGCTCTATTTCCTAGCACTTG
AGGGGCCTATCGTGCCAGGTACGGTACTCTACTGTACAGTACAGTGCACC
TACTTCCTACTTAGCGCTTGAGGGGCCTATCGTGCCAGGTACAAGTACAG
TGCAAGTGCTCTACTTCCTAGCGCCGGAGCACTTTACTAAGTATTGTTGA
CAGGAACAACACAGTGCGAGGTGCAGGCCACGTCACTTTACTAGCAGTTG
CAATATATATATATATACTATGTAGTACTTCGCAGTATATACGTTCCCAT
GTTTTGCTTGCCGTAGTGCCGAGGCCATTCACAAGTGCCTCATCCGAGGT
GCTTCCGAGCAACGTATGTACAGTACTCTACTACTGTTGTGCAGTGCCCA
CGGGGTGACGACGGCTACACGCATTGTAGCAAATCATCCCCAGCCATTGT
CACCTGGAGCAGGGGAGCTGTTCTTGTGTACAGTAAGACTTTTTGACACA
CATTGTACGCTGTGGTATTTTTCGAGCCGTGTGCAGCATATACTACACTA
CACGGATTGCTGACGCCGTGCTTACTATGCGGTAATAAAAAAAAAACATC
GCCTGGGCTTGTATGGCGAGGGGGACGGCCCAAGTAGCGAGTTACAGGCT
CAGACAGACCCGATTGGTGGGGCCGACATCCAATCCGATGCTTGACGGTA
TGATAGTGGTGATAATTGTGCCAGGCCAGCGACTTGATCTTCCTCTTCAC
CGTGGCTAGGGTTAGGGTTCTAGCCCTAACCCTAAACCCTAACCCTAGCC
CTAAGATGCTTGACGGTATGATAATTGTGGCAGGCCAGCAATTTGATCTT
CTTCCTCTTCACCGTCGTCCAATCCGATACTTGACGGTATGATAATTATG
ACAATTGTGCGCGGCCAGCGACCTGATCTTCCTCTTCACCGTGGTTAGGG
TTAGGCTTCTACCCGTAACCCTAAACCCTAACCGTAACCCTAAGGTGCTT
GACCGTATGATAATTGCGGCAGGGCAGCGACTTGATCTTCCTCTTCACCG
TCGTCCAATCCGATACTTGATGGTATGATATTTTTACTTGTGCCAGGCCA
GCGATTTCGTCTTCCTCTTCACCGTGGCCACCTCCGCAAGAGGCTCCACC
CCGGGGCACGGGGACTTTGTCTGCAACGAGTTTAAGGTGTGTGTGTGTGT
GCGTGTGTGAATGTACTAGTATACGCTTTTTTTTGCTCTTTCGAACGTCC
ACTTGGTGATACTCTGCTGAGTGTACTGTACTGTACTGCGGTGCTGTAGT
ATAGTATTTCCGGTGCAAACTTCTGTAGGACACACATACTCACTCTCGGA
GCTCCGAGGTACTGTGAGGTGATGTTTACTCGTACTGTAATCCAACCTCC
AGATTATGGCATAGCCTTAGGCTATGGTATATTACTCAATGCCGCACGTT
GTGTCGGCTAGGCAGGAAGGTTATGCCGCAAGACAAGCCAATGAGTACAC
AATTTTGCACACCGCTACCTGCTCCTATGGTATGGTCTCTTGCTTCCAAC
TCCCGAACCTACCCAATCTCACACCAAGGGTGCTGGCGTGGCGGCGGCCT
GGTCCAAGCTGGTGGGTCAGGGTGGCAAGGGGGGTCCTAAAAGTCACCCC
GGTGATAATGTTGATGACCCCAGGAACTTATGGAGGGGGTCCTTTTCCAA
GGGGGGGTCCGTATTCCCTGCCCTTTACAGTAGGTGGCTAGGTGTACACG
TGGGCTTGTGGGCACTTAGTGAGTAAAGTGCAACTCCTCCCCCTTCCCTG
GCGAGCGGCTGTAAGTTCACGCCCAACCACTATAGTATGGTAAGTTTGCA
GTGTGTGGCCCGCACGTCCCACAAAAATGTTCCTGTGAATACTACTTTTG
TCTGACGGGAAAGCAGGCACCAGCCCTTTCTGCGACATTTTACTAGTAGC
TATATACTACCTGTTAATATTGTACTCGAGTACAATATTAACAGGAGAAT
AAAGCACAGGGCGGGGTGCAGGCCACGTCACTGCAGGCACATCTACTTAG
TAGTGTTGTACTCCTCCGATCGGAAAGTCTGTACCGACTTACGCGTTGCA
GGATTTGTACAATACACGCACACACAAACATATACTTCGCACTTGAAGCA
TGCACAGTTATGAAGCACTACCGTAGTCCTCTCCAGTTAAGCATCATCGA
CCCTTGGAGCATGGATCCCTTGAAACTGTATGTGTGACTTGCCCGTGGCA
GCATTTGTACAATACACACACACAACCATATACTACGTAGTATGTACAGT
TGTGAAGCACTACTGTAGTCCTATCATCGACCCTTGGAGCATGGATCACT
TGAAAATGTCTGCGTGACTTTGTACCCGTGGCAGGATTTGCACAATACAC
ACACACAAATATATACTTCGTACTTGAAGCACGTACAGTTATGAAGCACT
ATCGTAGTCCTCTCCAGTTGAGCATAGTCAACCCTTGGAGCATGGATCAC
TTGAAACTATCTGTGTGACTTTCCCGTGGCAGGATTTGTACAATACACAC
ACACAAACATATATGTACGAGTACAGTTATGAAGCACTACTGTAGTCCTA
TCATCGGCCCTTGGAGCATGGATCACTTGAAACTGTCTGTGTGACTTACC
CGTGGCAGGATTTGTACTTGCTGCGCTACACGGGAGACCTGGAGGCTCTG
AGTTTCTCGGACGATGAGGTGTCAGACGTCAAGTGGGTGCCCATGGATGT
TCTCGAGGCCAAACTCATTGCGCAGGTGAGTGGACAATCACTGTACTGCA
AAGTACGTGGAAGTACTTGTAACCTATTTTTACACTATACAGGTGCTTGA
GCACTATTGTATTGTACAATGTACTGTACTGTAAAGCACTTGACTGTACA
AGCACGTTCGCACTACCTACATGCTGTACAGTGGAGTTGTACTGTACAGC
ACTGAACTGTACAAGTGCGTGAGCACTACTGTACGAAGCGCCCAATTACT
TCAAAGTATGGCACACATGTACACACCATGCATTACACTGGAGTACATGC
ATGATGTTTCGCCCTCGATGGCGATTTTTCGCAAATATCTGGACTGTGAT
TCATATAAATTGTGACGAGGTCCACTCGCGCTTGTGTGAGATTGACTGTT
CTCGTATTGGTTGTTGTCAGAATTGAGTGTTCTTATATTAGTGATTATCA
CATCAAGGAACTAAGAACAAGGAGGGGGGGGGGGGGGGGGAAGAAAGCAA
AGAGAAGCAAAACCAAGAAACAGGAAGGGGGTGGGTTTTTTTTTTTTTGC
ATGGGGCATGGTGTGGGAGATGGGGAAGGGTGTTTGGGGACGGAGTCCCG
GGGCAGGGGCCAGGCGGGGTTTAATATCTGGACTACGGCAAGCACAGCGT
GACCACATGTGTGTACTGGTCCTACTTTACCCCAAGGTTTGACTTAGGGC
TGTCGGTAACGCACGCAAGGCTACCGTAGGGGAAGTTAGATATGGAACCC
CCTGCGATAATGATCTGGGCCTCAAAATTATCGAAGGGGGTTCCCTACCT
ATCGGCCGTTAAATATCTAAGGGGCCCCCCTTCGATAGTGAATCGGGCGG
GCATTGCCGGTACCGGGGGGTCGATAAGCGGGGGGGTTCGATATTTTATA
CTCCAAATGAAGCGCTGGGGTGGTTCGATACGGGGGGTTCGAAATAATCC
AAGCCTGGGAGGCGCGGTCGAGGGGGTTCGATATTCTGAGTTTGTGGCAG
CAGCTTCTGGCACGGGCGTTGGGCAGTTGGATGCCGTCACGCCCCCCTCC
CCCCTTTTAGGCGTTCTTTTGTTTTTCTTCTTCTTCTTTCTCTCTTTTTT
CCCGCCTCTTTCCCCTTTGGTTTTGTTTTTTACCCTCCGCCCCCCACCTG
CCTTTTTCTCAGTTCCTTGATGTGATAATCACTAATATAATAAGTTCAAA
TGAAACAACTACTAATACGAGAACAGTGAATCGTACACATGTGCGATTGT
ACCTCGTTACAATTTTTGTGAATCACACGCCCAGTCGAGATGATGGACGG
CACGGGGGAGGGTACGGATCACCATGCTAGCCGGTCGGAGGCGTGGTTCG
ATGCTGACTATGCAAGAACCCCCCTCCCCTGACGTAGAACCCCTTACACA
CACACATCACACATACACACACACACACACACAACGCCCTGCTTCAATCC
GTGCCCCCCCCCCCCTCGACCGATGCTAACAATTGCCGTTCCCATAGGAC
CCCGAATTCATTCCTCGGCCCAAGCACTACACGGAGGCCTTCTTTCGTGC
TCTGCGGAGGGAGGTGGAGGCATGTAGAAGTACAAGTACTGAGTAGTTAG
CTATTTTCTGGCAGTCAGGCAGGAGTGCGTCCGAGCTGGGCTGGCAGGCA
ATGGACAAAGTTGAAAGAAATGCCATCATGACGACAGTAGAAGTACTTCG
AAGTACTGAGGAACTAGCTACTTCTGAAGTATTTTCTGACAGTCAGGCAC
CAGTGCATCCGAGCAGGGCTGGCAGGCACATGGAACAATTTGCCGAGCTG
GGCTGGCGGGCACATCGGCAAAGTTGAAACAAATGCCGTCACGATAGTGA
TACTCAAAGATGGGCATGGCCATGCCGCCGTAGACCGGCGTACCTGCCAT
CAAGTGGTTAACACTTGCTTCAAAGGAAGTACTTCTCGGAAGCACGTCGA
AGTAATACTTTGCAGTAGCAAGTGCTTCTACATATGTGCTACATTGCACG
TGTGTGGCGGTAGTTCACTCTGTCTGCGTGCATGGGTAGGCTGCAATAGA
AGCACTACTCGTAGAGACACATATTTACCCTAAATCTGCCTGTACCCTAA
ATCTGCCTATGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig90:21095..27906-

>mRNA_S-ischiensis_contig90.20844.1 ID=mRNA_S-ischiensis_contig90.20844.1|Name=mRNA_S-ischiensis_contig90.20844.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1590bp|location=Sequence derived from alignment at S-ischiensis_contig90:21095..27906- (Schizocladia ischiensis KU_0333)
ATGAGACTGGCGGCTGCGCTCTTGTCAGCCTTGCCTGCCCCCGCCTGGGG
CTTCGTCCCAGCTGTTGGGGCGTGGTGCAACTCGGGGCCTGAGCTTTGTG
CGCGCCGTACTGCACGGCACCCCATGAGGGCTGGCTTCAAGATGAGACTG
GCGGCTGCGCTCTTGTCAGCCTTGCCTGCCCCCGCCTGGGGCTTCGTCCC
AGCTGTTGGGGCGTGGTGCAACTCGGGGCCTGAGCTTTGTGCGCGCCGTA
CTGCACGGCACCCCATGAGGGCTGGCTTCAAGATGCTGGCTTCTGTGGCG
GAGCCTGCAGTGCAGGGGCAGGACCCGGGGGAGATGTTTGACGTTTACTT
TCCGCCATCCAAAGGCCTGGCCGTTCTCGACGAGCCCCCCAAGCCTGCTG
GCATCCGCAAGCCACGGAGGGTGGTGCACAGTGAGGGCGAATGATGCTGG
CTTCTGTGGCGGAGCCTGCAGTGCAGGGGCAGGACCCGGGGGAGATGTTT
GACGTTTACTTTCCGCCATCCAAAGGCCTGGCCGTTCTCGACGAGCCCCC
CAAGCCTGCTGGCATCCGCAAGCCACGGAGGGTGGTGCACAGTGAGGGCG
AATGGCACCGGGCCGTGCACATCTGGCTCTTCAACGACAAGGCACCGGGC
CGTGCACATCTGGCTCTTCAACGACAAGGGAGAGCTGGTCCTGCAGAAGC
GCTCTCCTCACAAGGACACCTTCCCCAACATGTGGGACGTGAGTGTCGGG
GGGCACATGACCAGCGGGGACAGCAGCCTGGAGACGGCCATAAAGGAGAC
TAGCGAGGAGCTTGGCCTATCCTGCCAGGGAGAGCTGGTCCTGCAGAAGC
GCTCTCCTCACAAGGACACCTTCCCCAACATGTGGGACGTGAGTGTCGGG
GGGCACATGACCAGCGGGGACAGCAGCCTGGAGACGGCCATAAAGGAGAC
TAGCGAGGAGCTTGGCCTATCCTGCCAGGCCAGCGATTTCGTCTTCCTCT
TCACCGTGGCCACCTCCGCAAGAGGCTCCACCCCGGGGCACGGGGACTTT
GTCTGCAACGAGTTTAAGGCCAGCGATTTCGTCTTCCTCTTCACCGTGGC
CACCTCCGCAAGAGGCTCCACCCCGGGGCACGGGGACTTTGTCTGCAACG
AGTTTAAGGATTTGTACTTGCTGCGCTACACGGGAGACCTGGAGGCTCTG
AGTTTCTCGGACGATGAGGTGTCAGACGTCAAGTGGGTGCCCATGGATGT
TCTCGAGGCCAAACTCATTGCGCAGGATTTGTACTTGCTGCGCTACACGG
GAGACCTGGAGGCTCTGAGTTTCTCGGACGATGAGGTGTCAGACGTCAAG
TGGGTGCCCATGGATGTTCTCGAGGCCAAACTCATTGCGCAGGACCCCGA
ATTCATTCCTCGGCCCAAGCACTACACGGAGGCCTTCTTTCGTGCTCTGC
GGAGGGAGGTGGAGGCATGTAGAAGTACAAGTACTGAGTAGGACCCCGAA
TTCATTCCTCGGCCCAAGCACTACACGGAGGCCTTCTTTCGTGCTCTGCG
GAGGGAGGTGGAGGCATGTAGAAGTACAAGTACTGAGTAG
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