mRNA_S-ischiensis_contig9.20792.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20792.1
Unique NamemRNA_S-ischiensis_contig9.20792.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A836CD75_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD75_9STRA)

HSP 1 Score: 174 bits (440), Expect = 6.680e-48
Identity = 94/171 (54.97%), Postives = 115/171 (67.25%), Query Frame = 1 
Query:  238 RTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRGQRLPAFTAGPERVWGLTAYVAEGVLQRAVVPAL 750
            R AAVLVPLCN  G    LFTVRT  V THKGQVAFPGGH++AGE  V AALRET EE+GE +G + ++G CQ VPAVTGT VTPV+ ++  DV       L       DEV   FT+ +A +LD   R ++ LG RG  +P F A P R+WGLTA++ +GVL+ AVVPAL
Sbjct:   35 RRAAVLVPLCNDMGVPSILFTVRTATVPTHKGQVAFPGGHIKAGEGPVDAALRETVEEVGEGIGAVHIVGHCQTVPAVTGTRVTPVVGWVERDVDGCRRLEL-----CPDEVAHAFTVPLAHLLDPANRGMERLGARGD-MPVFMADPHRIWGLTAFITDGVLRNAVVPAL 199
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A482SM29_9ARCH (CoA pyrophosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SM29_9ARCH)

HSP 1 Score: 158 bits (400), Expect = 3.750e-42
Identity = 83/172 (48.26%), Postives = 118/172 (68.60%), Query Frame = 1 
Query:  238 RTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRG--QRLPAFTAGPE-RVWGLTAYVAEGVLQRAVVP 744
            R AAVL+PLCNRHG+A  +FTVRT+ VSTHKGQV+FPGGH++  E  ++AA+RET EE+G+ +G I VLG+ Q VPA+TGT+VTPVLA++  DV       LQ  + S  EV+ +FT ++A++ +   R I  L  +G   ++P +    E R+WGLTA + + +L   V+P
Sbjct:   40 RKAAVLIPLCNRHGQASIMFTVRTQNVSTHKGQVSFPGGHIDPNETAIEAAIRETREELGDGIGIIQVLGVAQTVPAITGTLVTPVLAYVETDVQD-----LQHLTPSPSEVDVIFTRTLAELTNPSYRTIQELERQGVKYKMPVYGGQSEHRIWGLTAMILDPILHNVVMP 206
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A7S2RJD6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJD6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.240e-40
Identity = 105/263 (39.92%), Postives = 142/263 (53.99%), Query Frame = 1 
Query:    1 GGRWASKSQALFMLAAAVAWLTVTPAAMKFPSV---AFDERSLGVIRKVVAANRPLPL-HPGGGLAHLAAAPRVSDR-RAGRGKRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRGQRLPAFTAGPE--RVWGLTAYVAEGVLQRAVVPALYGGPSP 768
            G  W  ++   F  AA     ++  +A   P V   A D  S  V  K++   R + + H    LA        +D+  A R  R AAVLVPLC   GE G LFTVR+  VSTHKGQV+FPGGH+++ E    AALRE  EE+G SLGP+D++  C  VPA+TGTMVTP++ F+ +D+G      LQ     RDEV+  F +S   + D  LR   +    G  +P F    E   VWGLTA++ +GVL+  + P     P+P
Sbjct:    2 GSAWGMRTSRAFGSAAVTLAFSMRGSAWFTPEVLRVAADSASAAVGEKMLPTIRTISVRHQEQMLARRKRIREGADKDAAARADRRAAVLVPLCTSCGEPGVLFTVRSNAVSTHKGQVSFPGGHMDSHESAPVAALREAWEELGTSLGPVDLIARCSPVPAITGTMVTPIIGFVADDIGPTPHNQLQL---CRDEVDRAFFLSFDQLHDPNLRLKRHDKKHGD-MPVFHGDDEGAEVWGLTAFILDGVLREFLTPLYENRPAP 260
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A0G4EFA4_VITBC (Nudix hydrolase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFA4_VITBC)

HSP 1 Score: 162 bits (410), Expect = 3.050e-40
Identity = 90/177 (50.85%), Postives = 118/177 (66.67%), Query Frame = 1 
Query:  238 RTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSW---SRDEVEGVFTISVADMLDSELREIDNLGPRG---QRLPAFTAGPERVWGLTAYVAEGVLQRAVVPAL 750
            R AAVL+PLCNR+G A  L T+R+ K+S H GQV+FPGGH+E GE  + AALRET EE+G  +G I ++G C+QV AVTGT+V PV+  +R DVG  L        W   S DEV  VFT+S+  + D  L+ ++ L PRG     +PA+  G  +VWGLTA++ EGVL+R VVP L
Sbjct:  299 RQAAVLIPLCNRNGVASVLLTLRSDKIS-HPGQVSFPGGHIERGETPIDAALRETHEELGSRIGDITIIGTCEQVVAVTGTIVHPVIGLLRRDVGELL--------WIEKSDDEVADVFTLSIEQLTDPSLQTLEQL-PRGGSTYTVPAYLGGVHKVWGLTAFILEGVLRRVVVPVL 465
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A0G4FNC8_9ALVE (Nudix hydrolase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FNC8_9ALVE)

HSP 1 Score: 157 bits (396), Expect = 4.300e-39
Identity = 90/175 (51.43%), Postives = 117/175 (66.86%), Query Frame = 1 
Query:  235 KRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGES-LGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNL--GPRGQRLPAFTAGPERVWGLTAYVAEGVLQRAVVPAL 750
            +R AAVLVPLCNR+GEA  LFTVR+ KV THK QV+FPGGHLE GE    AALRETGEE+G   L  ++++G C +V AVTGT+V P L  + ED+G  L RL      S DEV+ VFT+S+  + D     ++ +  G    R+P + AGP  VWGLTA++  GVL+R ++P L
Sbjct:   69 RRQAAVLVPLCNRNGEASVLFTVRSSKVRTHKRQVSFPGGHLEPGESGKDAALRETGEELGTGFLKGMEIVGRCDEVEAVTGTIVHPYLGVMCEDLGD-LRRL----DPSADEVDEVFTLSLTQLTDPRCYTMETVVRGKAAYRIPCWRAGPAPVWGLTAFILFGVLRRLIIPFL 238
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A4D9D8V8_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8V8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 6.310e-39
Identity = 102/265 (38.49%), Postives = 138/265 (52.08%), Query Frame = 1 
Query:   76 AAMKFPSVAFDERSLGVIRKVVA--ANRPLPLHPGG----GLAHLAAAPRVSDRRAGRGKRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGES----------------------------LGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRGQR---LPAFTAGPERVWGLTAYVAEGVLQRAVVPALYGG 759
            A+ + PS   D   L  I + +A  A +P+PL P        +H ++ P  +   A    RTAAVL+PLC  HG+A  L+ +RT  VSTHKGQV+FPGGH+   E   QAALRE  EE+                               +GPI +L  C+ +PAVTGT+V P LA +  DVG      L   S    EV G+FT+S+A +LD  L   ++L   G++   +P F  GP +VWG TAY+ EGVL+  + P L GG
Sbjct:    4 ASSQAPSYTLDAALLHRIERRIASFAGQPIPLLPTSLTRPSPSHASSTPSAASASA---PRTAAVLIPLCTAHGQASLLYQIRTASVSTHKGQVSFPGGHILPNEAPAQAALREFYEEMAGDPRGGQGVPQSSTPSDRSHSKADGAAAPRIGPISILAACEPLPAVTGTVVHPFLALLHRDVGD-----LAHFSPDPSEVAGIFTLSLAQLLDPALAGREDLEGGGRKRLNVPFFEGGPAKVWGFTAYITEGVLESVLRPCLGGG 260
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A7S3H581_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H581_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.740e-34
Identity = 81/185 (43.78%), Postives = 107/185 (57.84%), Query Frame = 1 
Query:  238 RTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRGQRLPAFTAG----------------PERVWGLTAYVAEGVLQRAVVP 744
            + A+V +PLCNRHG A  LFTVR++ V THKGQV+FPGGHLE GE E+ AA RET EE+G ++G +  +G CQ +PA T T V PV+ FI +DVG       +    S  EVE VFT S+  +LD   +  + L  R ++ P  T                   ER+WGLTA + + VL + V P
Sbjct:   40 KQASVFIPLCNRHGVASVLFTVRSQHVGTHKGQVSFPGGHLEPGESEIAAAHRETFEELGFTIGNLHTIGNCQTLPAKTLTPVHPVIGFIEQDVGD-----FEHFEPSEGEVERVFTRSIEQLLDPAYKRYETL-QRDEKSPKVTMPVYGWPDENGDKSSIEYQERIWGLTAMILDSVLAKVVAP 218
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A7R9U5Y6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Y6_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.280e-33
Identity = 80/179 (44.69%), Postives = 103/179 (57.54%), Query Frame = 1 
Query:  217 RRAGRGKRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRGQRLPAFTAGPERVWGLTAYVAEGVLQRAVVPALY 753
            + +G+  R AAVL+PLC        LFT RT  VSTHKGQV+FPGGH+EA E   + ALRET EE+G S   I  LG C+ +PAVTGTMVTPV+  ++ D+      L      S DEVE VFT+ +  +L   L E+     RG  LP F      VWGLTA +  G ++  +   L+
Sbjct:   47 KESGKTPREAAVLIPLCTNERIPSVLFTKRTDLVSTHKGQVSFPGGHVEADESYERCALRETYEELGISPEHITTLGFCETIPAVTGTMVTPVIGLLKPDLTDVPLTL------SEDEVETVFTLPIRALLSDALLEMRKYENRGT-LPVFHGADHEVWGLTAMILHGFVENCLKERLH 218
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BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A7S4A553_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A553_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.300e-33
Identity = 84/182 (46.15%), Postives = 110/182 (60.44%), Query Frame = 1 
Query:  214 DRRAGRGKRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQVAFPGGHLEAGEDEVQAALRETGEEIGESL-GPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDNLGPRGQRLPAFTAGPERVWGLTAYVAEGVLQRAVVPALYG 756
            +RR   G RTAAVLVP+ + + E   +F+VR+ KVSTHK QV+FPGGH+E  E   QAALRE  EE G        V+  C++V AVTGT+VTPV+A     +    + +     +  DEV  VF++ VA +LD   RE      RG RLP F  GP  +WGLTAYV +GVL++ V P + G
Sbjct:  126 ERRRSNGARTAAVLVPIASVNDEPHVVFSVRSDKVSTHKSQVSFPGGHIELNETAEQAALREAREEFGPDFESGFSVVAECREVLAVTGTVVTPVVACRSRPLDLGRDVV-----YEEDEVAEVFSLPVAHLLDPVNREERMYENRG-RLPVFHGGPAEIWGLTAYVLDGVLEKLVRPCVGG 301
[Close]
BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Match: A0A7S1U5N8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5N8_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.280e-27
Identity = 90/269 (33.46%), Postives = 123/269 (45.72%), Query Frame = 1 
Query:   91 PSVAFDERSLGVIRKVVAANRP------LPLHPGGGLAHLAAAPRVSDRRAGRGKRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQV---------------------------------AFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMVTPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREI-------DNLGPRGQRLPAFTAGPERVWGLTAYVAEGVLQRAVVPALYGG 759
            P  AF  R L  + + +    P      +PL        L A     D+   R +R AAVL+PLC   G    LFT RT  VSTHKGQV                                 +FPGGH+E GE     A+RE  EE+G      +VLG C+ VPAVTGT+VTPV+A ++ D+       L+  + S  EV+ VF++ +A ++  EL E+         +  +   LP F  GP  VWGLTA +  G ++  + P L  G
Sbjct:    3 PGAAFPPRLLAALTRALKGTVPDDCARAVPLLEANVRKVLEARRLREDKERARPRRRAAVLLPLCTDGGVPSVLFTKRTELVSTHKGQVRFGGTPSALERQSRPPLQRQPHSRPRSAQKPKVSFPGGHIEPGETHRACAVREMFEEVGIDKACAEVLGYCETVPAVTGTLVTPVVAVLQPDLAE-----LRPFTLSDGEVDEVFSLPLAGIVSGELLEMRPYETKKHQVRTKSGALPVFHGGPHEVWGLTAMILHGFIENCLRPQLQEG 266
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD75_9STRA6.680e-4854.97NUDIX hydrolase domain-like protein n=1 Tax=Tribon... [more]
A0A482SM29_9ARCH3.750e-4248.26CoA pyrophosphatase n=1 Tax=archaeon TaxID=1906665... [more]
A0A7S2RJD6_9STRA2.240e-4039.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4EFA4_VITBC3.050e-4050.85Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A0G4FNC8_9ALVE4.300e-3951.43Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A4D9D8V8_9STRA6.310e-3938.49Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S3H581_9STRA1.740e-3443.78Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R9U5Y6_9STRA5.280e-3344.69Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4A553_9STRA8.300e-3346.15Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S1U5N8_9STRA1.280e-2733.46Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3279125..3287432 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score108.6
Seed ortholog evalue5.4e-21
Seed eggNOG ortholog272952.HpaP806834
KEGG koko:K18665
EggNOG free text desc.NUDIX domain
EggNOG OGs3QCU6@4776,COG0494@1,KOG3069@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-28_000710.1
Exons5
Model size1464
Cds size951
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817402.4242144-UTR-S-ischiensis_contig9:3279124..32796011622817402.4242144-UTR-S-ischiensis_contig9:3279124..3279601Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 3279125..3279601 -
1695741087.8256488-UTR-S-ischiensis_contig9:3279124..32796011695741087.8256488-UTR-S-ischiensis_contig9:3279124..3279601Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 3279125..3279601 -
1622817402.4988403-UTR-S-ischiensis_contig9:3287396..32874321622817402.4988403-UTR-S-ischiensis_contig9:3287396..3287432Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 3287397..3287432 -
1695741087.908095-UTR-S-ischiensis_contig9:3287396..32874321695741087.908095-UTR-S-ischiensis_contig9:3287396..3287432Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 3287397..3287432 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817402.4355462-CDS-S-ischiensis_contig9:3279601..32799651622817402.4355462-CDS-S-ischiensis_contig9:3279601..3279965Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3279602..3279965 -
1695741087.843113-CDS-S-ischiensis_contig9:3279601..32799651695741087.843113-CDS-S-ischiensis_contig9:3279601..3279965Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3279602..3279965 -
1622817402.449432-CDS-S-ischiensis_contig9:3281348..32815021622817402.449432-CDS-S-ischiensis_contig9:3281348..3281502Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3281349..3281502 -
1695741087.8572176-CDS-S-ischiensis_contig9:3281348..32815021695741087.8572176-CDS-S-ischiensis_contig9:3281348..3281502Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3281349..3281502 -
1622817402.4632418-CDS-S-ischiensis_contig9:3283677..32838101622817402.4632418-CDS-S-ischiensis_contig9:3283677..3283810Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3283678..3283810 -
1695741087.8697155-CDS-S-ischiensis_contig9:3283677..32838101695741087.8697155-CDS-S-ischiensis_contig9:3283677..3283810Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3283678..3283810 -
1622817402.4736304-CDS-S-ischiensis_contig9:3285650..32857231622817402.4736304-CDS-S-ischiensis_contig9:3285650..3285723Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3285651..3285723 -
1695741087.881519-CDS-S-ischiensis_contig9:3285650..32857231695741087.881519-CDS-S-ischiensis_contig9:3285650..3285723Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3285651..3285723 -
1622817402.4864533-CDS-S-ischiensis_contig9:3287169..32873961622817402.4864533-CDS-S-ischiensis_contig9:3287169..3287396Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3287170..3287396 -
1695741087.8930826-CDS-S-ischiensis_contig9:3287169..32873961695741087.8930826-CDS-S-ischiensis_contig9:3287169..3287396Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3287170..3287396 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20792.1prot_S-ischiensis_contig9.20792.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 3279602..3287396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20792.1

>prot_S-ischiensis_contig9.20792.1 ID=prot_S-ischiensis_contig9.20792.1|Name=mRNA_S-ischiensis_contig9.20792.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=317bp
MLAAAVAWLTVTPAAMKFPSVAFDERSLGVIRKVVAANRPLPLHPGGGLA
HLAAAPRVSDRRAGRGKRTAAVLVPLCNRHGEAGFLFTVRTRKVSTHKGQ
VAFPGGHLEAGEDEVQAALRETGEEIGESLGPIDVLGLCQQVPAVTGTMV
TPVLAFIREDVGTALERLLQSQSWSRDEVEGVFTISVADMLDSELREIDN
LGPRGQRLPAFTAGPERVWGLTAYVAEGVLQRAVVPALYGGPSPAGPAGA
GPAAPGPRGGQGPGAAGGGPGRGGADADSDNDGPPGPQGSQGNREESRAR
GPAGGWSGPGPDRSFL*
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mRNA from alignment at S-ischiensis_contig9:3279125..3287432-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20792.1 ID=mRNA_S-ischiensis_contig9.20792.1|Name=mRNA_S-ischiensis_contig9.20792.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8308bp|location=Sequence derived from alignment at S-ischiensis_contig9:3279125..3287432- (Schizocladia ischiensis KU_0333)
GGGGGAAGGTGGGCTTCGAAGAGCCAAGCATTGTTCATGCTCGCTGCCGC
GGTCGCATGGTTGACTGTAACCCCTGCGGCGATGAAGTTCCCTTCAGTTG
CCTTTGACGAACGGAGCCTGGGCGTTATACGCAAGGTGGTTGCGGCCAAC
AGGCCCCTGCCATTGCACCCTGGCGGCGGCCTTGCGCACTTGGCAGCTGC
GCCCAGGGTCTCGGACCGCCGTGCAGGCCGGGGAAAGCGAACGGCGGCCG
TGCTCGTTCCACTGTGAGTCCTCGCCCTCAAGGTTCAACTCGAAGGAGGT
TCTTGGCACCATCCCCGGCTAAGAGTATCATTTCCGGCAGCTAGAGAAGA
GGGGCGCGCGGCGGAATGCCTTTCCTGTGATACCTTCCCCGCCTTCCCAA
GCGCTGTTTCTCCACGTGGCTGGCTGGCAGCAGTGTGTAAACTTGCTGTT
TATACCATGGTCCCTGGGCAATGCTATTTACTTCTTGTACTGAGCAATTT
CAGTGGTGGGGTAAGTAACCGCGAGGAGTTGTAACGATTCAACCTTCCAT
GGCAGTATTCACCGGCCCTTCCTCGAGCCTGTCGTGTCACTTGAGCTGCA
GCAGGGTGCTTTTTGCTGCCTCATTCACCGCCGCGTTCAAGCACACTGTT
CGCGTTATGGTGAAGCTGCACGTGCTGCATCTTCGAAGCACTACAGTGCA
GTGCTTTTACATGGTATTTACGAGGCGGGGGTCAATGGTCTCAGGACTAC
GGCAAGCACAGCGTGAGTACACATATATTTCAAAGTATAGTATATATACT
TACGTCTCACTCGGCTCACCAGGCAGTATCGACTACTATACAGTACGAGT
AGTACTTCCTCGGAAGTCATTGTTGGCGCGTGATCAATACAGATGTCGCC
ACTGCAGAAGCACTGCTTACAGCGCATAAGTGAGTACATATACTTGTACA
GCACATAGTGGCGTCCTGTATATGGTTGCAAGCGAGTCACAATCGAACAA
TAGGGATGGCTCATGGGAACTATGCCGTGTCATGATGCCGTATCACGGTG
CGACGCGACAAGAAACAACACAGCACATAAGTAGAGTACATATACGAGTA
CTTGTGCAGCACATAGTGACGTCCTGTAGATGGTTGTAAGCGAGTCTCAA
TCGTACAATAGGGATGGCTCATGGGACCTGACTGACACCATATCACAGTG
CGATGCGACAAGAAACAACATATGCTCGCACCACACAACGTGCACCGTGA
CTAATTTAGGCCCCTTGGGCCGGCGTTCCACGGGCGGCTTGCCCAGCTCC
TTCACTTTGGTCAACGGCAATGTTTGGGTAGCCTTTGGTTCTGGCCCCCG
TTTCTCAATGGGCTGCCCGACCTGTACTGTATTTCACTCAGCAAGTGGAA
GTCGGCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTGTCTCTC
TCTCCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTTTGCCCCTGGCCATGG
TTGCTGGAGGGCCGCGAACCGTGTGCTGATCTCCGCGTGGACACTTGCCC
CTGAATAATTGCAAGCAACCAAGAATTGAGCATTTCATGCTCCGTGTCGA
CCGAGGCGCGTGGTCAATGGTCTCGGGACTACAGCAAGCACCATGTGAGT
ACATATTTTATTGAGTGTTTCATGCCCCCGGAATGACGGGCCTGCCCCTG
CTTACACAGGTGTAACCGACACGGAGAGGCGGGCTTCCTCTTCACTGTGC
GCACCCGCAAGGTCTCCACGCACAAGGGCCAGGTCAGTAGTGTTGTGAAC
TGGTGCCGGTTTCTACCGGTCGGTTCCGGTTAACTGGTTTAACTGGCTAG
CCGACCGGTGGCCAATCGTGTCGCCGGAGCGGGTGACATGCCCGTTATTC
GTTGATTTTGGCAATACGTAAGCCATTACCGGCAACCAGTAAAACCCGAC
CGGTCACACGACCGGTTAACAGTTAAACTGGTAGGCCTTGCCAGTTCACA
ACTCTACAGGTCAGACACACGTCGCCCCCAAATTTTCGAAGATGTCTTGC
TGCCACCTCCATGCCGGCCCAGGTGGCCTGCCGGGGTTGGGAGGGAGATT
TGCTGGGCAACGTGATGTGATAGGGCGTACGCTCTGTTCTACAGTGCTTC
AAAGTACAAACGGGATAGCTAATAGCAAAGCAGGGCGAGGTGCAGGCCAC
GTCACTATAGACCTCAACGGTGGCCCTTCCTTACGTCGCCCAGGGAGGCA
GTTTTGACATTGCATCACATCACACCACATCACTAAGGCCCTCGACAGCG
GGCCTTCCTTAGCTGGCCGGGGAATTCTGACAGGAAGAAGTAGTGCTATC
GGGATGACGGTAGTTAATAACAACACCGGGCGAGGCGCAGGCCATGTCAC
CAAAGATCTCAACAGCGGTAAACGCACTCCTTGGCTCACCAGGGAAGGCA
GCACTTGGAAGCAATACACTACTGCCTGAAGTACTACTCGTACATAGCAC
TGCCGGGTAGTTTATATGTACTTATATACTTCGAAGTATATATATAGTTG
TGCTTGCCGTAGCCCCGAGACCATTGACCACACGCCTCGGTCGAGACGGA
GTTGGGAAGAATAGACTGCTTAGTAGTGCGAAGAAATAGGCTACTGTACT
GCTTAGTGGTGCCAATGTTCCATGGCCGGAGGGCTACGACTATGCGCAGC
GTGCGGGGGAGACGATGCAGTTTGAATCGTGAGCACATACCGGTACTGAG
GGCTTTGAAGCAATGCACTGCTAGAGTAGTAGCAGGTACTTCGAAGTACA
GTAGAGGTGTACGCACTGCGGTTGGTGTCACCTCTGTTAAAAGCCAGGTG
ATGTTTCCTTAGCTTGCGTACTCTACAGTACTACCAGCAAACACACAGGG
CGAGGCGCAGACCACGTCACGAAAGACCTCGAAAGTGGTAAACACCTTCA
TTAGCTCGACAGGGAAGGATTGTGTACGGAAGCAGAGGGGGAGGAGGACG
ACGAAAAGGAGGAGGACGAGGAGGAGGAGGAGGAGGAGCAGGATCTACGT
ACAGTACGCCTCCCTCAGCTCGCAGGGAAGGATTGTGTGCGGAAGCAGAG
GGGGAGGAGGAGGAGGACGACGTACGTACAGTAGGCCTGCCCTAGCTCGC
AGGGAAGGATTGTGTGCGGAACCGGAGAGGGAGGAGGAGGAGGAGGAAGA
GGAGGACTTACGGACAGTATTGACAGGAACAAAACGGGGCGAGGTGCGGA
CCATGTCACTAGAGACCTCAGCACTGGCCCTTCCTTATAACTCGCCAAAT
TTGTGTGGGGAAGGGGAGAAGACATACGTACGTGGTGCTGTGCCTGCATG
GCCTTTCCGGTTGGGCACCTGGAGGCCGGCGAGGACGAGGACGAGGAGGA
GGAGGAGGAGGAGGAGTAGGAGTAGTAGTACAGTAGTTGTAGTAGTACTG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTACAGTAGTTCTAGTAGTACTGT
AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAC
TCGAGTAGTAGTAGTAGTAGTAGGAGGAGGAGGAGGAAGACTTACATACA
GTAGTGCTGTGCCTGCATACAGGTGGCCTTCCCGGGCGGGCACCTGGAGG
CCGGCGAGGACGAGGTGCAGGCGGCCCTGAGGGAGACAGGGGAGGAGATC
GGCGAGAGCCTGGGGCCGATCGACGTGCTCGGCCTCTGTCAGCAGGTGCC
CGCCGGTGAGGGGCATATGTACGGCAATGCAGTACTGTAGCCGTACTGAG
GGTACGAGTGCAAGACTGCGGCACTACTGTAATTGTTTTCCCCCCACCCC
TCCCCCTCCTCCTCCTCCTCCTCCCCCCCCTCTTCCTCCCCTTCCACCTC
CCCTTCCCCACACAACTTTCCCCTGGCGAGCTAAGGAAGGGCCACTGTTG
AGGTCTCTAGTGACGTGGCCCGCACCTCGCCCCGTGTTGTTCCTTAAAAT
GCTGTAATTCGTAGCAGTTGAGCACTTGATTGGCCGTGTATCGCAAAGCC
TCCCCTGGCTCTGCCAGGGGAGGAGGGGGCCTGCTCCGTCTCGGCCGAGG
CGCATTGGGGCCCATGGTCTCGGGACTACGGCAAGCAACAGCGCGAGTGA
GTATATGGTACACCAGTGCATATATAGTGTGTGTATTTATACATGCACCT
AGAAGATATATGGTCCATGGTCTCGGGACTACGGCAAGCACAACGTGAGT
ACATATATATGTATACTCGAGTATACTTCGAAGTATATATATATATATAT
ATATGTTTGTACGCCTCGCCCGGCCTACCAGGCGTTCTCAGCTAATGCAT
GTGCGAATGCAGATTGTCGCTACTGGACTGCAGTAGAACTACCTGTGTAT
GTTCCCACGTCGTGATGCACTTGCGGTAGTCCCGAGACCGTTGACCTTGC
GCCGTTCGTTGATGGCAGAGCAACTGCTGCATCTACTACAGTAGCTATTC
AGATTGTCTCGGCGGGCGCTCCGCACAGTACTTGCTCTACGATGTACTCG
AGCATTATGTACTTCGAGTAGTATGTATGCAGTTGCCCGAGTACCTCCAG
TGGTAACTACTACAGTGTAGTATGAGTACAGTAACAAGGAAGGGCCACTG
TTGAGGTCTGGTGGTACTCGAGTCCCCCCCTCCTTCCCGTTCCTCCCCTG
AGTGATGTGATTTGATGTGTAAAACTACAGTGAAATACTAATCACATCGC
ACCACATCACATCAGGCTGCAGCTGCAGCGCTACTGTACCCCTTTTACCC
TATAGCGTACAAGCGCAAGTGCTTCCAAGTACGCCTCGGCAGTCGGACAG
CACCACCGTACAGCAGCCCAAAGGACGGCCGTTCGTTGGTCCCACTCTAA
AGCCCACGGTGCACAGGAACTGCATGAGCACACTACCCTCCTCCTCCTCC
TTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGTCCACCTCCCC
CTCCTCCTGTTCTCCCCTTCCCCGCACAAATTTCCCTTGGCGAGGCATAA
GGAAGGGCCACTGCTGAGGTTTCCAGTGATGTGGCCCGCACCTCGCCCCG
TTTTGTTCCGGGTAGTACTGTAGCATCGCCGTCCTCGAGGGGTCCAGTCA
AGTACGGTCAAAGTAGTTCAGAACCTCCCTCATTTGGTCAGCGCGCCACC
CGTTTTGAACTCGATGCTCGTGGCGGCGGGCGAGGCGGCCGGGATACCTA
CCCCTACAAGGGTGACCTGCGGGACAGTGGTTAATATAAATTGTAGCGAG
GTACAATCACACGTGTGTCAGATTGAGTGTTCTCGCATTACAGTAGTATT
AACAGGAACAACACGGGGCGAGGTGCGGGCCACGTCACTAGAGATCTCAG
CAGTGGCCCTTCCTTATAGCTCGCCAGGGGAAACGTGTGTGGGGAAGGGG
AGAAGAGGAGGATTGGTAGTTGTCCCATTTAAGAATTGAGTGTTCTCGCA
ATAGTAGTCATCATATCAAGGACTAAGAACACGGTGTCGTTCGTTTCATG
TCCTCCCGCATGTGCCGCGGGGTGCAGTAACCAGTGATGGAATATCTAAG
CAAATAGACCTATTTATCGACAGTGCTGATCTATTTGAGTGGTAGATAAA
CGGCGAGTTATATACATGTATGTATATATTGATAGTCGATATTCGATAGT
TTGATCCACACTGAATCCAAGTAGTTTTTGGCATGAAGATAAAAAGCGAG
TGGAAAAGAGGAGGTGTTCCTACTTACGTGAGTTCAGGGCCCCCTGCCCC
GGCAGCCGTCTTTTCACTCGCCTTCACTCGCAGGGCATACAGAGCAGGAA
AACAAAGTGGCTAGTAGCGCCAGCCACCAAAGCAGCCGAGCCTGATAACG
GTCTACTGATCGATATTCCATCACTGGCAGTGACCGGCACAATGGTGACA
CCGGTGCTGGCCTTCATCCGCGAGGATGTCGGGACTGCCCTGGAGCGCTT
GCTGCAGTCCCAGTCATGGAGTCGAGACGAGGTAGAAGGCGTATTCACCA
TCTCTGTGGCCGACATGCTGGATTCTGAGTTGAGGTGTGTGTGTGTGCGC
GCGCGCGCGTTTGCATTTGAGAGAGAGAACAAGAGAGGAGAGGAGAGCTA
GAGGGAGAGTCGTGGAGTCGAGATGAGGTAGAAGGCATCTTCACCATCTC
CGACATGCTGGATTCTGAGTTGAGGTGTGCGCGTGTGTGTGTGTGTGCGT
GCGCGTGTGCATTTGAGAGAGGGAAAGAGAGAGGAGAGCAGTCCCAGTTG
TGGAGTCGAGATGAGGTGGAAGGCGTCTTCACCATCTCTGTGGCCGACAT
GCTGGACTCTGAGTTGAGGTGTGCGTGTGTGCGTGTGTGCGTGTGTGTGT
GTGGGTGCGTGCGCGTGTGCATTTGAGAGAGAAAGAGAGAGAAGAGGAAA
GATAGAGGGAGGAGAGCAGTCCCAGCCGTGGAGTCGAGATGAGGTGGAAG
GCATCTTCACCATCTCCGTGGCCGACATGCTGGGTTCTGAGTTGAGGGGT
GTGTGTGTGTGTGTGTGTGTGCGTGCGTGTGTGGGTGTGTGGGTGCGTGC
GCGTGAGCATTGAGAGAGAAAGAGAGAGGAGAGGAGAGGCAAGTAGAGGG
AGAGAGAGAGAGGGAAAGTGTCTTCACCATCTCTGTGGCCGACATGCTGG
ATTCTGAGTTGAGGTGTGCCCGTGTGTGCGTGCATTCAAGAGAGAGAAAG
GCGGAGGAGAGGAGAGAGGGGGGGAGGGGAGGGAGGGAGAGAGAGAGAGA
GAGACTGAGAGAGAGAGGAGAGGAGAGGGGGAGGGAGGGAGGGAAGGAGG
GGGAGAGAGAGAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGGGGGGAG
AGAGAGAGCGTGTGCATGCGTGTGGTGTGTCTGTGCGTGTGCCTGTGTTG
TGTGTGTGTGGGCACTTTTGCTACTCGAGTACCGTCTCAGTGTTTTCCTA
CAGCAGTATGCACCACGCGGTAGTACTTCCGGCGCCAGAGTATTCGTCCC
GTCATAGTAGGGATGCGAGGCCAATGGCCCAAGGCTGCCCTGCAGACCGT
GGGGGGTGATTGGTGGTCCAGCACGGAGTATGCTGGGCCGACGGGCGGTG
GCATGCCGAGGAGACGGGGTAGTAACAACCCCGTCTATCCAACATGAGTA
CACACACATTCATACATACTGCGTAGTATACTTCATACTTGGAAGTGCAT
GTACTCACACCTAACGATGCTTGCCGTAGGTTCGAGACCATTTACCCCGC
GCCTCGATCGAGACGGAGCATGGGTAGAGTACATAACTTTGTGCCGTCGA
CCAAGCATGCACTTGGCTTTGCCGCGAGACAAGGGCTCCAGTGAATCAAT
AGTCAAGACCTGGAAGCACTTCGAAGTACACTGACCGAGGCCTGCACCGG
CACCGCCGCCGCCGCAGGGAGATCGACAACCTTGGGCCCAGGGGCCAACG
CCTTCCAGCCTTCACCGCCGGCCCCGAGAGAGTATGGGGTCTGACAGCCT
ACGTGGCGGAAGGGGTCCTCCAGCGAGCGGTAGTGCCCGCACTCTACGGT
GGCCCCAGCCCTGCGGGCCCTGCGGGCGCCGGGCCCGCCGCCCCCGGCCC
CCGGGGGGGCCAGGGGCCCGGGGCCGCGGGGGGTGGGCCCGGGCGTGGGG
GAGCCGACGCAGACTCGGACAACGATGGACCCCCGGGCCCTCAGGGTAGC
CAAGGGAACAGGGAGGAGAGTCGGGCACGAGGGCCTGCCGGTGGATGGTC
TGGCCCCGGCCCGGACCGGTCCTTCCTGTGATAGAGTACTTCGAAGTATT
ATGTATTTTTGAATTTTTTGCACGAAGATGAATAAGCGAGTGGGAAAGAA
GAGGTGTTCCTACTTGCGCGAGTGCAGGGCCCCCCACGCCCGGAAGCCCG
TCTTTTCACCGGCCTTCTTGAATTGTTTCTGGACATGCGAGTTCCGGGCT
CCGTCCCAGTAGGTACCCGGCCACCTCAGGCTCTGGTATACGAAAATTTA
CACATCGAGCATCAGGCAACAGTCGACAACGCCGGGAGAGGGCGACTCAA
GGATGAGAACCAACGTACCGTTCAAAACTACTACGAGTAGTACGTCAGCA
ACATGGCACCGAACACAGTTGAAGGGCCGAATAAATCAGACTCAAAAATG
CGCACAACTGCGTACTCTGGCACGGCTTCCCAAGCCCTTTCTCTGATGTG
GAACGCTACTGCCCTGTAACAGCTGTTATGGACCGCTGCGGCTGCCTCAA
CGGTCTAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:3279125..3287432-

>mRNA_S-ischiensis_contig9.20792.1 ID=mRNA_S-ischiensis_contig9.20792.1|Name=mRNA_S-ischiensis_contig9.20792.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1902bp|location=Sequence derived from alignment at S-ischiensis_contig9:3279125..3287432- (Schizocladia ischiensis KU_0333)
ATGCTCGCTGCCGCGGTCGCATGGTTGACTGTAACCCCTGCGGCGATGAA
GTTCCCTTCAGTTGCCTTTGACGAACGGAGCCTGGGCGTTATACGCAAGG
TGGTTGCGGCCAACAGGCCCCTGCCATTGCACCCTGGCGGCGGCCTTGCG
CACTTGGCAGCTGCGCCCAGGGTCTCGGACCGCCGTGCAGGCCGGGGAAA
GCGAACGGCGGCCGTGCTCGTTCCACTATGCTCGCTGCCGCGGTCGCATG
GTTGACTGTAACCCCTGCGGCGATGAAGTTCCCTTCAGTTGCCTTTGACG
AACGGAGCCTGGGCGTTATACGCAAGGTGGTTGCGGCCAACAGGCCCCTG
CCATTGCACCCTGGCGGCGGCCTTGCGCACTTGGCAGCTGCGCCCAGGGT
CTCGGACCGCCGTGCAGGCCGGGGAAAGCGAACGGCGGCCGTGCTCGTTC
CACTGTGTAACCGACACGGAGAGGCGGGCTTCCTCTTCACTGTGCGCACC
CGCAAGGTCTCCACGCACAAGGGCCAGGTGTAACCGACACGGAGAGGCGG
GCTTCCTCTTCACTGTGCGCACCCGCAAGGTCTCCACGCACAAGGGCCAG
GTGGCCTTCCCGGGCGGGCACCTGGAGGCCGGCGAGGACGAGGTGCAGGC
GGCCCTGAGGGAGACAGGGGAGGAGATCGGCGAGAGCCTGGGGCCGATCG
ACGTGCTCGGCCTCTGTCAGCAGGTGCCCGCCGGTGGCCTTCCCGGGCGG
GCACCTGGAGGCCGGCGAGGACGAGGTGCAGGCGGCCCTGAGGGAGACAG
GGGAGGAGATCGGCGAGAGCCTGGGGCCGATCGACGTGCTCGGCCTCTGT
CAGCAGGTGCCCGCCGTGACCGGCACAATGGTGACACCGGTGCTGGCCTT
CATCCGCGAGGATGTCGGGACTGCCCTGGAGCGCTTGCTGCAGTCCCAGT
CATGGAGTCGAGACGAGGTAGAAGGCGTATTCACCATCTCTGTGGCCGAC
ATGCTGGATTCTGAGTTGAGTGACCGGCACAATGGTGACACCGGTGCTGG
CCTTCATCCGCGAGGATGTCGGGACTGCCCTGGAGCGCTTGCTGCAGTCC
CAGTCATGGAGTCGAGACGAGGTAGAAGGCGTATTCACCATCTCTGTGGC
CGACATGCTGGATTCTGAGTTGAGGGAGATCGACAACCTTGGGCCCAGGG
GCCAACGCCTTCCAGCCTTCACCGCCGGCCCCGAGAGAGTATGGGGTCTG
ACAGCCTACGTGGCGGAAGGGGTCCTCCAGCGAGCGGTAGTGCCCGCACT
CTACGGTGGCCCCAGCCCTGCGGGCCCTGCGGGCGCCGGGCCCGCCGCCC
CCGGCCCCCGGGGGGGCCAGGGGCCCGGGGCCGCGGGGGGTGGGCCCGGG
CGTGGGGGAGCCGACGCAGACTCGGACAACGATGGACCCCCGGGCCCTCA
GGGTAGCCAAGGGAACAGGGAGGAGAGTCGGGCACGAGGGCCTGCCGGTG
GATGGTCTGGCCCCGGCCCGGACCGGTCCTTCCTGTGAGGAGATCGACAA
CCTTGGGCCCAGGGGCCAACGCCTTCCAGCCTTCACCGCCGGCCCCGAGA
GAGTATGGGGTCTGACAGCCTACGTGGCGGAAGGGGTCCTCCAGCGAGCG
GTAGTGCCCGCACTCTACGGTGGCCCCAGCCCTGCGGGCCCTGCGGGCGC
CGGGCCCGCCGCCCCCGGCCCCCGGGGGGGCCAGGGGCCCGGGGCCGCGG
GGGGTGGGCCCGGGCGTGGGGGAGCCGACGCAGACTCGGACAACGATGGA
CCCCCGGGCCCTCAGGGTAGCCAAGGGAACAGGGAGGAGAGTCGGGCACG
AGGGCCTGCCGGTGGATGGTCTGGCCCCGGCCCGGACCGGTCCTTCCTGT
GA
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