mRNA_S-ischiensis_contig9.20782.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20782.1
Unique NamemRNA_S-ischiensis_contig9.20782.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: D7FS97_ECTSI (Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS97_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 4.650e-109
Identity = 160/267 (59.93%), Postives = 187/267 (70.04%), Query Frame = 1 
Query:    1 EETQGPRDRYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWF-------------------DKSTGA-------------------------PRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGK-LTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTVA 666
            +++  P+ R+YTPDDVALHNCAEDCW+SLFGQVLD+T+LI  NRGPLA PLIAAAGTDVSHWF                   DKS+                           PRTFVDP TGLT  Y PMGRFLH+PPNFPTT W T FGLPWW D  R+VGK LTRKAR +++VN LS+QED+LLVACEDT+ +IQ RY E NAHAASYTWK L+ E+FVP  M +TL ENG+VD+D  FEKLGI+ D Y PVLH+Y+NDDLT+A
Sbjct:   11 DDSSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKPKPRGIGGSDKSSNKALSTKIVKEGDDGNGRLEECENASDPRTFVDPQTGLTTPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 277
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BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A836C925_9STRA (Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C925_9STRA)

HSP 1 Score: 313 bits (803), Expect = 5.880e-106
Identity = 145/218 (66.51%), Postives = 175/218 (80.28%), Query Frame = 1 
Query:   25 RYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKG----EEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTVA 666
            RY+TP+DVA HNCAEDCWVS   +VLD+T LI E+RGPLA+P+IAAAG+D+SHWF+  TG P+T +DP TGLTVAYTP GRF+H+PPNFPTT WRTDFG PWW+D   +VG LT +AR ++IVN L+QQEDELLV+CEDT+  IQ RY+E NAHA SYTWKAL       +FVP+DM KTL ENGVVD+ + F KLG + D   PVLH+Y+NDDLTVA
Sbjct:   13 RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 230
[Close]
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A7S2F938_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F938_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.420e-94
Identity = 130/212 (61.32%), Postives = 160/212 (75.47%), Query Frame = 1 
Query:   25 RYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLT 660
            R+YTP+D+A HNCA+D WVS+  +V D+T+LI  NRGPLAQPLI  AG D+SHWFD  TG  +TF+DP  G+ V YTP GRFLH+PP  PT  W TDFG  WW DE  I+G+LT K R+++IVN L+ Q D L V  E+TLEEI+ RY E N HA SYTWK L+ + FVP+DM KTL ENGV DE EEF+KLGI+ D+Y PV+H+Y+NDDLT
Sbjct:    5 RFYTPEDLAAHNCAKDIWVSINYKVFDLTELIQANRGPLAQPLIEVAGQDISHWFDSKTGGVKTFMDPSRGVRVPYTPHGRFLHVPPPEPTAAWNTDFGTAWWLDEDLIIGRLTEKTRKVQIVNVLTHQTDLLTVCSEETLEEIRDRYMEYNKHAQSYTWKKLEEDAFVPMDMEKTLDENGVPDESEEFDKLGIDFDYYYPVIHVYFNDDLT 216
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BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A7S2WHL5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHL5_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.190e-90
Identity = 127/214 (59.35%), Postives = 160/214 (74.77%), Query Frame = 1 
Query:   25 RYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTVA 666
            RYYTP++VA HN A D WVS+F +VL++T L+ E+RG L  PLI AAG D+SHWFD+ TG  +T +DP  G+ + YTP GRFLH+ P  PT NW T    PWW+DE+ ++GKLT+K R+++IVN +SQQ D L V  E+T+ EI+ RY E N HA+SYTWK L    FV +DM KTL ENGVVDE EEFE+LGIE DFY P+LH+Y+NDDLTVA
Sbjct:   34 RYYTPEEVAAHNSAGDLWVSVFHRVLNLTDLVREHRGELTVPLIEAAGQDISHWFDEKTGNVKTRIDPGKGIRLPYTPQGRFLHVAPAEPTANWSTKIANPWWQDENLVIGKLTQKTRKVQIVNVISQQTDLLTVCSEETISEIRDRYMEYNRHASSYTWKKLAQGTFVLLDMEKTLAENGVVDESEEFEELGIEDDFYYPILHVYFNDDLTVA 247
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BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A7S2C328_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C328_9STRA)

HSP 1 Score: 263 bits (672), Expect = 4.420e-86
Identity = 119/216 (55.09%), Postives = 161/216 (74.54%), Query Frame = 1 
Query:   19 RDRYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTVA 666
            R RYYTP DVA HN A DC VS+F +V D+T LI +N+GPLAQPL+  AG D+SHWF  +    +T++DPD G+T+ YTP GRF+ +PP+ PT +W T FG+PWW++E  IVG+L+ K R+I IVN L+QQ+D L V  E+T+ EI+ RY E N HA SYTWK L   +FV ++M KTL ENGV+DE ++FE+L I+ DFY P++H+Y+ D+LT+A
Sbjct:   12 RRRYYTPGDVAAHNSATDCLVSIFHRVFDLTDLIRDNQGPLAQPLVEVAGQDISHWFTNNPVQCKTYIDPDRGMTLPYTPHGRFIDVPPSEPTASWSTSFGIPWWQNEDIIVGRLSEKTRKIMIVNVLTQQKDVLEVCSEETMLEIRDRYMEYNKHAESYTWKKLHEGKFVVMNMQKTLDENGVIDESDDFEELEIDEDFYYPIIHVYFEDNLTIA 227
[Close]
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A7S1TZ39_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ39_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.430e-85
Identity = 127/246 (51.63%), Postives = 166/246 (67.48%), Query Frame = 1 
Query:   19 RDRYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGI---------------------------EGDF---YTPVLHMYYNDDLTVA 666
            R RYYTP+++ALHNCAEDCWVS+FG+V D+T+ IA NRGPLAQP+I  +G DVSHWFD+ T   R  +DP+T L + Y PMGRFLH+PP FP++ WRTDFG PWW+D    +G L++K R ++I+N+L++Q DEL+V  E+T++EIQ R    NAHAASYTWK+L+  +F  +DM+KTL ENGV+DE + F+ L                             E D    Y P L +YYNDDLTVA
Sbjct:   10 RRRYYTPEEMALHNCAEDCWVSVFGKVYDLTEFIAANRGPLAQPIILMSGKDVSHWFDEKTKYVRMHIDPETNLRLPYLPMGRFLHVPPAFPSSAWRTDFGTPWWQDADLCIGALSQKTRVVRIINALTRQADELIVPTEETIDEIQDRCLSYNAHAASYTWKSLREGKFEVLDMAKTLAENGVIDELDNFKMLDPKPEGFPPEETDLTESEKRIVEEANRYDESDIHAEYIPELVLYYNDDLTVA 255
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BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A1V9Z4R5_9STRA (Cytochrome b5-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4R5_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.680e-82
Identity = 113/215 (52.56%), Postives = 153/215 (71.16%), Query Frame = 1 
Query:   25 RYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKEC--NAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTV 663
            RYYTP++VA+H CA+DCWV +F +VLDI+ L+A++RG L QPL+  AG D++HWF+  T   +T +DP+  + + + P GRFLH+PP  P T+W T    PWW DE  ++G +T K R I+IVN+L+ Q   + V  E+T+ EIQ RY +   NAHA SYTWK L G EF+P+DM K+L ENGV DE  EFEKL ++ D Y P+LH+YYNDDLT+
Sbjct:   11 RYYTPEEVAIHKCADDCWVVVFSRVLDISGLVAQHRGKLTQPLVQHAGEDITHWFNPETREVKTHIDPERNIRLPFLPYGRFLHVPPPEPVTDWNTLELTPWWTDEQYVIGLITAKVRMIQIVNTLTHQSHSIQVCSEETIAEIQKRYVDLQYNAHAGSYTWKYLDGNEFIPLDMDKSLAENGVEDESLEFEKLNLDADDYQPILHIYYNDDLTI 225
[Close]
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A1V9ZHC6_9STRA (Cytochrome b5 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZHC6_9STRA)

HSP 1 Score: 253 bits (645), Expect = 5.050e-82
Identity = 114/216 (52.78%), Postives = 151/216 (69.91%), Query Frame = 1 
Query:   19 RDRYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARY--KECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLT 660
            R RYYTP++VA+H   +DCWV +F +VLD+T LI ENRG L QP++  AG D++HWFD  T   +T +D D  + + Y P GRFLH+PP  P TNW T    PWW D+   +G +T K RRI++VN+L+ Q   + V  E+T+ EIQ RY   + NAHA SY+WK L G EFVP+DM+KTL ENGV D+ EEFE+L ++ D Y P++H+YYNDDLT
Sbjct:    7 RRRYYTPEEVAMHKSPDDCWVIVFSRVLDVTSLIVENRGKLIQPIVQHAGEDITHWFDAETREVKTHIDQDRNIRLPYLPYGRFLHVPPPQPVTNWNTLELKPWWNDDEYSIGHVTEKVRRIQVVNTLTHQSHSIQVCTEETINEIQTRYIDHQYNAHAGSYSWKYLDGNEFVPLDMNKTLTENGVADDAEEFERLNLDVDDYQPIIHIYYNDDLT 222
[Close]
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A024U931_9STRA (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U931_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.750e-81
Identity = 113/215 (52.56%), Postives = 157/215 (73.02%), Query Frame = 1 
Query:   25 RYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECN--AHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTV 663
            R+YTP++V++H CAEDCWV +F +VLD+T+L+A +RG L QP++  AG D++HWFD  T   RT +DPD  L + + P GRFLH+PP  P + W T    PWW D+   +G +T++ R I++VN+L+ Q   L V  E+T+EEIQ RY + N  AHAASYTWK L G+EFVP+DM+KTL ENG+ DE  EFEKLG++ D + P++H+Y+NDDLT+
Sbjct:   36 RHYTPEEVSVHKCAEDCWVVVFSRVLDLTELVANHRGALTQPIVNHAGEDLTHWFDPDTRDVRTHIDPDRNLRLPFLPHGRFLHVPPPEPVSTWNTLDLKPWWNDDQYFIGFITQRVRTIQVVNTLTHQVHSLDVCTEETVEEIQYRYIDLNFNAHAASYTWKYLDGDEFVPLDMAKTLAENGIPDESLEFEKLGMDADEFKPIVHIYFNDDLTI 250
[Close]
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Match: A0A7S2F2A0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F2A0_9DINO)

HSP 1 Score: 251 bits (640), Expect = 3.540e-81
Identity = 111/214 (51.87%), Postives = 152/214 (71.03%), Query Frame = 1 
Query:   25 RYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQPLIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTTNWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLEEIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKLGIEGDFYTPVLHMYYNDDLTVA 666
            RYYTP D+A HN   DCWVS F  V D+T L+AE +GPLAQP+I AAGTD+SHWFD  TG P+  +DP TGL   Y P GR++H+PP  P +NW T++  PWWED    +GK +++ R++ +VN +++Q++ L V  E+T+ EIQ RY+  NAHA SYTWK L     +P++M K L ENG+ DE E+F +LG++ D + PV+H+Y+NDDLT A
Sbjct:   21 RYYTPADIAKHNLEHDCWVSYFNHVYDLTPLLAEYKGPLAQPIIDAAGTDISHWFDSVTGQPKMHIDPTTGLEEIYCPWGRYIHVPPQGPESNWATNYQTPWWEDRRYFIGKSSKRTRKVAVVNLMTKQKNTLEVPVEETVAEIQERYEVFNAHAGSYTWKRLG----IPLNMDKNLEENGMKDETEQFMRLGVDPDDHIPVIHLYFNDDLTEA 230
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS97_ECTSI4.650e-10959.93Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A836C925_9STRA5.880e-10666.51Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A7S2F938_9STRA1.420e-9461.32Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WHL5_9STRA1.190e-9059.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C328_9STRA4.420e-8655.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1TZ39_9STRA6.430e-8551.63Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1V9Z4R5_9STRA2.680e-8252.56Cytochrome b5-like protein n=1 Tax=Achlya hypogyna... [more]
A0A1V9ZHC6_9STRA5.050e-8252.78Cytochrome b5 n=1 Tax=Thraustotheca clavata TaxID=... [more]
A0A024U931_9STRA1.750e-8152.56Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S2F2A0_9DINO3.540e-8151.87Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3172315..3177383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.1
Seed ortholog evalue2.6e-86
Seed eggNOG ortholog2880.D7FS97
Preferred nameCYB5D1
KEGG koko:K05747,ko:K11448,ko:K11642
KEGG Pathwayko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231
EggNOG free text desc.heme binding
EggNOG OGsCOG5274@1,KOG0537@2759
EC3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCytochrome b5
Ec32 orthologEc-05_004830.1
Exons5
Model size669
Cds size669
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20782.1prot_S-ischiensis_contig9.20782.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 3172315..3177383 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817401.5755074-CDS-S-ischiensis_contig9:3172314..31724611622817401.5755074-CDS-S-ischiensis_contig9:3172314..3172461Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3172315..3172461 -
1695741086.9965484-CDS-S-ischiensis_contig9:3172314..31724611695741086.9965484-CDS-S-ischiensis_contig9:3172314..3172461Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3172315..3172461 -
1622817401.588714-CDS-S-ischiensis_contig9:3173219..31732821622817401.588714-CDS-S-ischiensis_contig9:3173219..3173282Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3173220..3173282 -
1695741087.011626-CDS-S-ischiensis_contig9:3173219..31732821695741087.011626-CDS-S-ischiensis_contig9:3173219..3173282Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3173220..3173282 -
1622817401.6009836-CDS-S-ischiensis_contig9:3174846..31749451622817401.6009836-CDS-S-ischiensis_contig9:3174846..3174945Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3174847..3174945 -
1695741087.0237725-CDS-S-ischiensis_contig9:3174846..31749451695741087.0237725-CDS-S-ischiensis_contig9:3174846..3174945Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3174847..3174945 -
1622817401.6131876-CDS-S-ischiensis_contig9:3176785..31770671622817401.6131876-CDS-S-ischiensis_contig9:3176785..3177067Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3176786..3177067 -
1695741087.0357585-CDS-S-ischiensis_contig9:3176785..31770671695741087.0357585-CDS-S-ischiensis_contig9:3176785..3177067Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3176786..3177067 -
1622817401.6272447-CDS-S-ischiensis_contig9:3177305..31773831622817401.6272447-CDS-S-ischiensis_contig9:3177305..3177383Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3177306..3177383 -
1695741087.049452-CDS-S-ischiensis_contig9:3177305..31773831695741087.049452-CDS-S-ischiensis_contig9:3177305..3177383Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3177306..3177383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20782.1

>prot_S-ischiensis_contig9.20782.1 ID=prot_S-ischiensis_contig9.20782.1|Name=mRNA_S-ischiensis_contig9.20782.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=223bp
EETQGPRDRYYTPDDVALHNCAEDCWVSLFGQVLDITQLIAENRGPLAQP
LIAAAGTDVSHWFDKSTGAPRTFVDPDTGLTVAYTPMGRFLHLPPNFPTT
NWRTDFGLPWWEDEHRIVGKLTRKARRIKIVNSLSQQEDELLVACEDTLE
EIQARYKECNAHAASYTWKALKGEEFVPVDMSKTLGENGVVDEDEEFEKL
GIEGDFYTPVLHMYYNDDLTVA*
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mRNA from alignment at S-ischiensis_contig9:3172315..3177383-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20782.1 ID=mRNA_S-ischiensis_contig9.20782.1|Name=mRNA_S-ischiensis_contig9.20782.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5069bp|location=Sequence derived from alignment at S-ischiensis_contig9:3172315..3177383- (Schizocladia ischiensis KU_0333)
GAGGAGACACAGGGGCCCCGCGACCGCTACTACACCCCGGACGACGTGGC
CCTGCACAACTGTGCCGAGGACTGCTGGGTGGGTTGTGTTGCAGGGCAAC
CAGAGATCGCCGCGTGACGGCGGACCGCGGCACAGATCTCTCTCCCACGG
GAAGCCGCCCTCCTAGCACGCGTCGAACAAAGTGCACATGCCCCCCTCCC
TGTTGCTTGCGCGCTGGTCTTGTCTTGTCGTCAGTCCATGCCGTTGCCTC
CCGCTCCAACGGCGGGCACCGTTTCGTTGCTGTTGGACGTCCGTCCCTCC
ACGGCCCTTCCGGCAGGTGAGCCTCTTCGGGCAGGTGCTGGACATCACCC
AGCTGATCGCAGAGAACCGCGGGCCGCTCGCACAGCCCCTGATCGCCGCA
GCGGGCACCGATGTGTCGCACTGGTTCGACAAGAGTACGGGCGCCCCACG
AACCTTTGTGGACCCGGACACCGGCCTCACCGTTGCATATACGCCCATGG
GCCGGTTCCTCCACTTGCCCCCGAACTTCCCCACCACGAACTGGCGCACG
GACTTCGGCTTGCCATGGTGGGAGGACGAACACCGCATCGTGGGCAAGGT
GAGAGGGAGTGGGTTGATTCATATAAATTGCAGCGAGGTACAATCGCAGG
TGTGTGCGATTGACTGTTCTCGTACTAGCAGTTGTCCCATTTAAGAATTG
AATGTTCTTATATTAGTGACTATCACATCAAGGAACTAAGAACAAAGGGG
GGGTGAGGCGGCATGTTATGCCTCATTTTCCAGCTCAGGACTCCAGCAGC
AACCCGCGCAAGCAAAAGCGCCATGGTTCATCTCGCCTTTAGGGCCGGCG
GGTACATGGACGTAGCGCTAGCTAGAGCGCGGTTGGGCGAGCCGATTTTG
GTGTTGTGCATTCCTCCTAAGGGGCATGCGGGTTGCGTGAATCAGCACTT
TTCTTTTTGAAGTACGTGGAGTTGGCAAATTGTGGCAGGTTTTCTCTTCC
GCCTCGTTTTCGGACACGACCATATGCCTGTTCACCAGTGGCCGACAACC
GAATAAAAAACAAAATTGAATCCATTGCGCGTGCATGGAGACTGACAGTC
CGCAGATCCCTGCCCAAGAATGAGTTCCCTGTTTCGTTTTAGCTCGTGGT
CCGAACTCGTGGGGCCAAGAGCTAATAGCGATTCAATGAAGTGACCACAA
CGGTGGTCAGAGCTGTGCGACAGCGAGAAAACATCGTGCAGTGAGCCCGG
AAAAAATAGAGTGCCTTGGAGGGGCAAGGGACATAGGCACTTTGCAGCAA
GCTTACTGCACTGTAGACTTTCCCAACCATTGCGCAGCGAGCCCAGCAAA
AACAGAGTGCCTCGGAGGGGAAAGGGGCAAAAGCACTTTGCACGCAGATC
ACTGCACTGTAGATTTTCCAAACGAAGAGAACTGCCCGCGAGGGTCTGGG
AGGCGTTATCCTTCGGTAGTGCGGGATTGGGCAATACAAACATGCGACAC
AACTGCAGCTGCTTCGGCCCTCTTCTCCCATTGGGGGCCACGCGGAACCA
ATATACTACATATATGTACTCACGTGGTGCTTGCCGTAGTCCTGAGACCA
TTGACCACACGCCTCTGCCGAGACGGAGCAGGACCGCTCCTCCCCTGGCA
GAGCCAATGCTCCCGGAAACCGCGCGGGTCCCGATGCAAACACTACTCTA
CACCACCGATACTGGTGGCCAAGTTTAACCCTTTTACCCCCACTAAATTT
GGACTTACACACTAAAACCCTATGATTGTACGGACCCCAGGGGGAAAAGG
GTTAGCCCTTTGAGGACGGCAGCGCAGTCAACTACAGGGGTTTCTTGGCA
GTGAGGAAATGCGGTAAGTACAGCAGTGTGCCATCATCTTCCAAGGGCTC
AGGGGGCCTCTGCTAGCTGCGAGGACCCCTGTTATAGCGGCGGCACGCTA
AACACCCCGGGAGGAGTTAAAATGAAGGTGCGCTAAACTGTACAAGTTGG
CCGTCAGTGAGGAGTTAACACACAATCCTTCCCCAGGGATGAGCCAAGGA
AGGGCCACTACAGTACCGTACATTTGTTGAGGTCTATGGTCGCGTTGCCT
GCACCTCGCCCTGTGTTTTCCCTGGTTGTATATCAGGGCATGGACGCTAA
GGGTTCATAATTGCCCCCCCTGCCAGTGATGGACTACCTAAGCAAATCAA
CCTATTTATCGGCAGTACTGATGTATTTGAGTGGTAGATAAGCGGCGAGT
TCCAGGCCCCGTGCCAAAAGGCTCGTATTACTGATCTATATATCTATCGA
TAGTTGATGTTCGATGTTCGACATTTTGACCCACACTAGATCCAAGTAGA
TAGTAACGCCACCCACACAATCAGTCGAGCCCGATAACTATCTACTGATC
GATACAAACATCACTGCCACCCGGCCCCCCCGCGGCAGCTGACCCGGAAA
GCGCGGCGGATCAAGATTGTGAACAGCTTGTCTCAGCAGGAGGACGAGTT
GCTGGTGGCATGCGAGGACACACTAGAGGAGATACAGGTGACAGAATGGA
GTGATGATTCACGTAAATTGTAGCGAGGTACAATCGCACGTGTGCGAGAC
TAGAGGAGATGCAGGTGAGGGAATGGATTGATGGTTCGTACAAATCGTAA
CGAGGTACAATCGCACTTGTGTGAGATTGACTGTTCTCGTACGAAGTATT
CCTGTAGTAGTTGTCCCATTTAAGAATAGAGTGCTCTTATACTGCGAAGT
ATTAGTGATTGTCACATCGAGAAACGTAGAACAAGCAGGGGGGGCGGGGG
GAAGAGAAAAAATGAAGAGGGGTTGGAGGACCGGAGACTATTCCTGCTCG
AGGACACGCTGGAGGCGGTCGATCGAGGAGACAGATGAAGAACCACTTGC
TCGCTTAGGACACACTGTAGTACAGGATGTCCCGGGTGGGGGGGGGTTTT
TCTGCGCAGGACACAACACACGTGTGTATACATACGTGCATGTACTCATG
GGCTTGTCTTGCGGCCTACTACACACTGCTACCGAGTAGTACAGCAGACG
AGTACTCGTAGTACAGTAGGACACACTGCTACCGAGTAAGTAGGGATCAA
GGCGAGAGCATCGAAGATATTTTCAGGACCATGGCATACCTCGCTCGTCC
CATTTAGATCTCTGTCTGTTTCCTTGAAGAAAAAAAACAAATCGAGCCGC
GCGCTTCGTAGAACGGTGTGCATGATGGCTGTGAGAAACCATACGTTCAC
ATCCGGGGCACTTTCAAAGAAAAAAAAAAAACCACCTCCGATCACGGCCA
GTGATAGAATATCTAAGCAAATCAACCTATTTATCGACAGTACTGATCTA
TTTTGGTGGTAGATAAGCGGCGAGTTCCAGGCCCCGTGCCAAAAGGCTCG
TCCCAAAACGGGACTCAACGTATATCCATCGCTAGTCGATGTTCGATAGT
TCGACCTGCACTAAACCCAAGTAGCTAGGAACGCCACCCACAAAATTCAG
TCGAGCCCGATAGCTATCTACTGAACGATATTCCATCACTGATTACGGCA
AGCGCCGCCTCTTCAAGAGAGGCGCCCTAAGAACCCAGCAATGATTCCGG
TTCCCAGGACACGAACTAGTAACACTTGGGCGACGACCGCGCACTACATC
GGCACGTATTTCCTCACCAATCCTCCATGAGTCGGTAATAGTTTGCTCAG
TAGTGTGCCGTGGCAGCTAACAGAGGCCCTCAAAGGGCATAAAAAAGAAG
GATAAAAGAGCATCGCATCGTGGGATGCTGCGTTGGTTCTTCAAAGCACC
AAGCAACAACTAGTTCTCACCAACTACTGCGCTCCTCCTCTTCCTCCTCG
TCCTCGCCGTCCACCTCCCCCTCCTCTTCTCCCCTTGCCCACACAAATTT
CCCCTGGCGGGCCATAAGGAAGGGCCACTGCTGAGGCCTTTTTTGACATG
GCCCGCACCTCGCCCCGTGTTGTTCCTGTTAAGGCAGTAGAGCGCCGTAC
ATACAGCAATTGACGCTCATCTTGTGCTATGCCTGTCCTTCGGCCAATGG
GGAGCCCTGATGCCCTCGCCCTCCCACCCCTGCCCCCCTCGGCAACACCA
GGCGCGCTACAAGGAATGCAATGCCCACGCCGCCAGCTACACATGGAAGG
CGTTGAAGGGGGAGGTGAGGACGCGCCGGACGAACTCTTTTTTCGCTTGG
AACAGTCTCCAGCCTCACCTGCAATGTATCACTCAGGGTTGGCACTCACA
GTAGAGGTTGATTAGGGCATAATTAGCGTTCATTTTAGGTCTACTTACCA
CCACTTACCTCGAATTACTGTAAGGGCCTTTAAAGGGCACCACTTGGGGG
TTAATCGCCAACCCTGATAGCACTGACACGCCTGCCCAGTCCGTGGGGGA
TTGCGCCATTCAAGTACCGAAATCGCCTCCATGGAGCGGGCTTTTTTCCC
GTGTGTTTGGCCGGTGGGGCGATGGCTTGCTTTTGCGCCACACATGAGGC
GCGTGGTCCACGGTCTCGGGACTACGGCAAGCACAACGTGAGTATATATA
CTCGTATACGAGTACTCCACGGTCTCGGGACTACGGCAAGCACAACGTGA
GTATATATACTCGTATACGAGTACTCGAGTATATATACTTGAAGTACATG
CACACACTCGCACACACGCCCACAGACATAGCCCAGCATAGCACACACAC
ACAACGTGCGCACACGCACAAACATCACACACACACACACACGCGCGCGC
GCGCACACACACAAACATGTGCGTGCAAAAACATATAGAGGTACACACAC
ACACATGGACACAAGCTGCATGCATACGAGCCCCAGAAACTCGTTCATAG
AAGTCCGTCAATATGTCTCTTTCCTTGGCAGTTCGTATAATTACGACTCC
CCCCCCCCCCTCCCCCTTGCAGGAGTTTGTCCCGGTGGACATGAGCAAGA
CACTTGGCGAGAACGGGGTCGTGGACGAGGACGAGGAGTTTGAGAAACTG
GGGATAGAGGGCGACTTCTACACGCCCGTGCTCCACATGTACTACAACGA
CGACCTCACCGTGGCATGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:3172315..3177383-

>mRNA_S-ischiensis_contig9.20782.1 ID=mRNA_S-ischiensis_contig9.20782.1|Name=mRNA_S-ischiensis_contig9.20782.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1338bp|location=Sequence derived from alignment at S-ischiensis_contig9:3172315..3177383- (Schizocladia ischiensis KU_0333)
GAGGAGACACAGGGGCCCCGCGACCGCTACTACACCCCGGACGACGTGGC
CCTGCACAACTGTGCCGAGGACTGCTGGGAGGAGACACAGGGGCCCCGCG
ACCGCTACTACACCCCGGACGACGTGGCCCTGCACAACTGTGCCGAGGAC
TGCTGGGTGAGCCTCTTCGGGCAGGTGCTGGACATCACCCAGCTGATCGC
AGAGAACCGCGGGCCGCTCGCACAGCCCCTGATCGCCGCAGCGGGCACCG
ATGTGTCGCACTGGTTCGACAAGAGTACGGGCGCCCCACGAACCTTTGTG
GACCCGGACACCGGCCTCACCGTTGCATATACGCCCATGGGCCGGTTCCT
CCACTTGCCCCCGAACTTCCCCACCACGAACTGGCGCACGGACTTCGGCT
TGCCATGGTGGGAGGACGAACACCGCATCGTGGGCAAGGTGAGCCTCTTC
GGGCAGGTGCTGGACATCACCCAGCTGATCGCAGAGAACCGCGGGCCGCT
CGCACAGCCCCTGATCGCCGCAGCGGGCACCGATGTGTCGCACTGGTTCG
ACAAGAGTACGGGCGCCCCACGAACCTTTGTGGACCCGGACACCGGCCTC
ACCGTTGCATATACGCCCATGGGCCGGTTCCTCCACTTGCCCCCGAACTT
CCCCACCACGAACTGGCGCACGGACTTCGGCTTGCCATGGTGGGAGGACG
AACACCGCATCGTGGGCAAGCTGACCCGGAAAGCGCGGCGGATCAAGATT
GTGAACAGCTTGTCTCAGCAGGAGGACGAGTTGCTGGTGGCATGCGAGGA
CACACTAGAGGAGATACAGCTGACCCGGAAAGCGCGGCGGATCAAGATTG
TGAACAGCTTGTCTCAGCAGGAGGACGAGTTGCTGGTGGCATGCGAGGAC
ACACTAGAGGAGATACAGGCGCGCTACAAGGAATGCAATGCCCACGCCGC
CAGCTACACATGGAAGGCGTTGAAGGGGGAGGCGCGCTACAAGGAATGCA
ATGCCCACGCCGCCAGCTACACATGGAAGGCGTTGAAGGGGGAGGAGTTT
GTCCCGGTGGACATGAGCAAGACACTTGGCGAGAACGGGGTCGTGGACGA
GGACGAGGAGTTTGAGAAACTGGGGATAGAGGGCGACTTCTACACGCCCG
TGCTCCACATGTACTACAACGACGACCTCACCGTGGCATGAGAGTTTGTC
CCGGTGGACATGAGCAAGACACTTGGCGAGAACGGGGTCGTGGACGAGGA
CGAGGAGTTTGAGAAACTGGGGATAGAGGGCGACTTCTACACGCCCGTGC
TCCACATGTACTACAACGACGACCTCACCGTGGCATGA
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