mRNA_S-ischiensis_contig9.20765.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20765.1
Unique NamemRNA_S-ischiensis_contig9.20765.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A7J8MAE8_9ROSI (Uncharacterized protein (Fragment) n=1 Tax=Gossypium lobatum TaxID=34289 RepID=A0A7J8MAE8_9ROSI)

HSP 1 Score: 130 bits (326), Expect = 1.350e-31
Identity = 90/285 (31.58%), Postives = 142/285 (49.82%), Query Frame = 2
Query:  149 QEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFG--AGREELAAIAATAGLPDGGDEALATELEGVFAG-GFEGIVPRLFPRCKLVQCITTG 994
            QE+QE VL  IL  N  TE L      G      F+   P+  YE ++ Y+D I  G+   S L+  +++  LLS+GT+GG PK+IP T +     M+  +    +  K  S   EG+++       E+ T  GL A+  +T    + + K  L   CTSP +  L  +  +SM+  LL GLL+R EV  I  +FAS++   ++ LE  W++  +++RTG         A R  +++I  T   P+     LA  ++ +     +EGI+  L+P  K + CI TG
Sbjct:   26 QEIQEQVLEEILKRNAGTEYLSRFFPNGQADNQSFKTNVPIITYEDIQPYIDRIANGETS-SILLAYRIIQFLLSTGTSGGQPKLIPMTAESFEKRMSDLLLSDLVTRKCFSGSDEGKSLYLYFIKPEIETPSGLKASFFTTFYFKTESFKNGLAKFCTSPIDTILCLDNKQSMFCQLLTGLLQRDEVIRIGSSFASVLARSIKFLEDYWKELCSNIRTGYLSDWIADPACRNAMSSIL-TRPEPE-----LADLIQQICEDKSWEGIIKELWPEVKCISCIVTG 303          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1U8KM03_GOSHI (indole-3-acetic acid-amido synthetase GH3.17-like n=17 Tax=Gossypium TaxID=3633 RepID=A0A1U8KM03_GOSHI)

HSP 1 Score: 129 bits (323), Expect = 1.300e-29
Identity = 94/304 (30.92%), Postives = 147/304 (48.36%), Query Frame = 2
Query:   89 MADTPPAIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKA-GSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFA-GGFEGIVPRLFPRCKLVQCITTG 994
            MA        K  +E     +++QE +LG IL+ N  TE  L   + G T    F++  P+  Y+ ++ Y+D I  G      L+ + ++G  LSSGT+GG PK+IP T + + V  A      ++M K  G     G+ +  L A  +V T  GL A+A++T      + + +L    TSPYE     +  +S Y  LL GL++R EV  I   FA+ V  G++ +E  WR+  ++++TG             AA       P      LA  LE + +   +EGIV +L+PR K +  + TG
Sbjct:    1 MATNDYESVLKMLEEITTNARQIQEQLLGEILSKNAETE-YLQGFLQGQTDKQLFKKNVPIVTYDHIKPYIDRIANGKASSDILLVEPLIGFSLSSGTSGGQPKLIPITAESANVTAALGNLHLSLMVKHFGDLSQVGKRMELLFAKPDVETPSGLKASAVTTRAFKESSFQAILPKLYTSPYETIFCPDTKQSTYCQLLFGLIQRDEVVVIGSIFAATVLRGIKFIENNWRELCSNIKTGKISDWITDSGCRKAASLILKPNPK-----LADLLEDICSCKSWEGIVRKLWPRTKYIGTVCTG 298          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1Y1IJM7_KLENI (Auxin-responsive GH3 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJM7_KLENI)

HSP 1 Score: 129 bits (323), Expect = 1.630e-29
Identity = 107/309 (34.63%), Postives = 152/309 (49.19%), Query Frame = 2
Query:  101 PPAIAFKQFQEDL--GCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAG---DKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAK---AGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIK--PMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGGD-EALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
            PPA +    + D   G  QEVQ  VL AILA NE TE L S G+  S+SV  F+   P+T Y   + +V+   +      +P  L G+K+   LL+SG+T    K+IP T    T      +  A+I  +   A SN    R +N  R     P   GL A  L   L      K    +  + +SP E F + +  ++ Y H+LC L    ++ ++R +FA+       TLE  WR  V  VR+G    +   G EE+ A  AT    D  D ++LA ELE  F  GF+GI+PR++P+ K V+CI TG
Sbjct:   36 PPAYSIDDLERDAKEGV-QEVQRRVLTAILALNENTEYLRSYGLDRSSSVERFKAAHPLTTYGHFKPWVEREASNFHTGSEPKILCGEKIAHFLLTSGSTDSR-KLIPETEGSLTRATRLIVLAASIFTRFFGAESNAYALRLVNMTR---PQPLPGGLQAMHLVPALTRFGLDKFPDAVSRTMSSPAEVFTLFDAEQAAYCHMLCALAGAKKLTQMRTSFAASFVAAFHTLERDWRGLVEDVRSGGVNAAR-VGSEEVRAAIATRMARDCEDLKSLADELEAEFQKGFDGIIPRVWPKVKFVECILTG 338          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A6J1ITV1_CUCMA (jasmonic acid-amido synthetase JAR1-like n=5 Tax=Cucurbita TaxID=3660 RepID=A0A6J1ITV1_CUCMA)

HSP 1 Score: 127 bits (319), Expect = 4.190e-29
Identity = 94/303 (31.02%), Postives = 138/303 (45.54%), Query Frame = 2
Query:  119 KQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPM-EGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPML---EASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAP-----PSFGAGREELAAIAATAGLPDGGDEALATELEGVFAG--GFEGIVPRLFPRCKLVQCITTG 994
            ++F+E     + VQ   L  IL  N   E L + G+ G T    F+   P+  ++    Y+  I  GD  P  L G  +  M LSSGTT G PK IP+        M  F+T  A   +    P+  G+A+ F+ + K+  TK GL A   +T++  SP  K M+   ++ C SP E     +  +S+Y HLLCGL+ R EV  +  +FA  +    RT E  W +  +++R G        PS  A   +L             D  LA  +    AG   + G++P LFP  K +  I TG
Sbjct:   15 EEFEELTRDAERVQVETLKKILEENGWAEYLQNLGLNGRTDPQSFKECVPLATHDDFEAYIQRIADGDSSP-VLTGKPIKSMSLSSGTTKGRPKFIPFNDSLVETTMQTFLTSFAFRNR--QVPIGNGKALQFIYSSKQFKTKGGLAAGTATTNVFRSPKFKSMMKSIQSQCCSPDEVIFGSDVHQSLYCHLLCGLIYRDEVELVYSSFAHSIILAFRTFEQVWEELCSNIRDGVLSSWVIDPSIRAAMSKLLKP----------DPELADLIYKKCAGLSNWSGLIPELFPNAKYIHGIMTG 304          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A6D2K5T7_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K5T7_9BRAS)

HSP 1 Score: 127 bits (318), Expect = 5.380e-29
Identity = 97/299 (32.44%), Postives = 151/299 (50.50%), Query Frame = 2
Query:  107 AIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALV-GDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFG--AGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
            A   K+ +E     +++Q+ +L  IL  N  TE  L R + GS+    F++  PV+ YE V+ Y++ +  G+  PS ++ G+ +   LLS+GT+GG PK+ P   K            +AI++K      EG+ I FL       T  GL  A  +T   +S   K       TSP E  L  +  +SMY HLLCGL++R EV  +  +FAS + + +  LET W++  A++R+G         + RE ++AI     L    D A   E E +    +EGI+ RL+P  K ++ I+TG
Sbjct:    5 ASKLKELEELTSNAKKIQDDMLEEILKANANTE-YLRRFLHGSSDKKLFQKNVPVSSYEDVKPYIERVANGE--PSYIISGEPITNFLLSTGTSGGKPKIYPTNNKYFEDFAFFLALSSAIISKYVDGVQEGKMIMFLNTIMLSTTPSGLDLAPATTSYAMSDYFKKQPSKCYTSPDEVILCVDSKQSMYCHLLCGLVQREEVVSMASSFASTLVQAISFLETHWKELCANIRSGHVSEWITDLSCRESVSAILGGPNL----DLANLIERECI-QKSWEGIITRLWPNIKYIRSISTG 295          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: UPI0010A4C164 (jasmonoyl--L-amino acid synthetase JAR6-like n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4C164)

HSP 1 Score: 127 bits (318), Expect = 5.380e-29
Identity = 90/291 (30.93%), Postives = 135/291 (46.39%), Query Frame = 2
Query:  149 QEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPME-GRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEA---SCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGD-----APPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
            + VQ   L  IL  N + E L + G+ G T    F+   P+  ++ +  Y+  I  G+   S L G  +  M LSSGTT G PK +PW  +     +  + T  A   K    P++ G+ +NF+ + K+  TK GL+A   +T+L   P  K  ++A    C+SPYE     +  +S+Y HLLCGL+ R E++ +   FA  +    R  E  W +    +R G        PS  A  E+L        L    +EA     + V    + G++P LFP  K V  I TG
Sbjct:   25 ESVQRETLRRILEDNASAEYLQNLGLHGRTDPDGFKACVPLVTHKDLEPYIQRIIDGEAS-SFLTGKPITTMSLSSGTTQGKPKFVPWNDELFDTTLQIYQTSFAFRNK--EFPIQNGKVLNFIYSSKQFITKGGLIAGTATTNLFRDPRYKSSMKAIQSQCSSPYEVIFGSDFHQSLYCHLLCGLIFREEIQWVGSTFAHSIVHAFRVFEQAWEELCTDIREGVLTNRVTDPSIRAVMEKL--------LKPDPEEADLIYKKCVGLSNWYGLIPELFPNAKYVYGIMTG 304          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1U8I3J4_GOSHI (indole-3-acetic acid-amido synthetase GH3.17-like n=26 Tax=Gossypium TaxID=3633 RepID=A0A1U8I3J4_GOSHI)

HSP 1 Score: 127 bits (318), Expect = 5.910e-29
Identity = 88/286 (30.77%), Postives = 141/286 (49.30%), Query Frame = 2
Query:  149 QEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTG---DAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAG-GFEGIVPRLFPRCKLVQCITTG 994
            QE+QE VL  IL  N  TE L      G      F+   P+  YE ++ Y+D I  G+   S L+  +++  LLS+GT+GG PK+IP T +     M+  +    +  K  S   EG+++       E+ T  GL A+  +T    + + K  L   CTSP +  L  +  +SM+  LL GLL+R EV      FAS++   ++ LE  WR+  +++RTG   D     G  + +++ I          +  LA  ++ +     +EGI+ +L+P+ K + CI TG
Sbjct:   26 QEIQEQVLEEILKRNAGTEYLSRFFPNGQADNQSFKTNVPIITYEDIKPYIDRIANGETS-SILLAYRIIQFLLSTGTSGGQPKLIPMTAESFEKRMSDLLLSDLVTRKCFSGSDEGKSLYLYFIKPEMETPSGLKASFFTTFYFKTESFKNGLAKFCTSPIDTILCLDNKQSMFCQLLTGLLQRDEVVRFGSTFASVLARTIKFLEDYWRELCSNIRTGYLSDWIIDPGC-KNDMSLILTRP------NRELADSIQQICEDKSWEGIIVKLWPKIKYIHCIITG 303          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1B6PS82_SORBI (Uncharacterized protein n=8 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PS82_SORBI)

HSP 1 Score: 127 bits (319), Expect = 6.440e-29
Identity = 100/291 (34.36%), Postives = 139/291 (47.77%), Query Frame = 2
Query:  155 VQEAVLGAILAHNEATEPL---LSRGITGSTS---VVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLL-SSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCT---SPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGG-DEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
            +Q+ VL  ILA N  T+ L   L  G  G  +      F+   PV +YE V+ Y++ I  G   PS+L+  K +  LL SSGT+GG PK++P T ++       +     +M K      +GR +  L    E+ T  GLVA  + T    S   +   ++  T   SP EA L  +  +SMYA LLCGL RRGEV  +   FAS     ++ LE  WR     +R G    S         A+A     PD    +A+A E EG  +  + GIV RL+PR K +  I TG
Sbjct:   81 IQQRVLREILAMNAGTDYLRGFLGAGAEGRDADELAATFKDRVPVVEYEDVKPYIERIANGA--PSSLISSKTITELLTSSGTSGGQPKLMPSTEEELDRKTFLYNLLVPVMNKYVEGLDKGRCMYLLFVKPEITTASGLVARPVLTSYYKSRHFRERPDSPYTRYTSPNEAILCPDSAQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEAHWRALCDDIRAGRVDASRVTDAACRDAVARVVARPDPALADAIAAECEGSSSSSWRGIVRRLWPRTKYIDVIVTG 369          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A0U9HTE9_KLENI (Indole-3-acetic acid-amido synthetase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HTE9_KLENI)

HSP 1 Score: 126 bits (316), Expect = 1.620e-28
Identity = 98/307 (31.92%), Postives = 146/307 (47.56%), Query Frame = 2
Query:  101 PPAIAFKQFQEDL--GCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSA---LVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMA-GFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLI---LSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
            P      + ++D   GC +++Q+ VL  IL  +E TE L    +  +++  DF+ L PV DY   RE+V+   +G+ + ++   L  +K+   LLSSGTT G  K+IP TV   T  +  G +T+  I    G+   +  ++  +          GL A  + T LI   L   +  +L   C SP E +       + Y H+LC L  RG++  +R  FA  +   L  LE  W  F+  +RTG         R   A +        G +  LA  LE  F  GFEGIVPR++PR K V+CI TG
Sbjct:   11 PAVYGINELEQDAAAGC-EQIQQQVLRGILLLHEKTEYLQRYNLGPTSTAEDFKALHPVCDYPHFREWVEREASGEAERTSNQILCAEKIFQFLLSSGTTSGR-KLIPETVGSMTRSVRFGQLTKTLIQRHFGAESTD-HSLRLVNCSAPQILPGGLPAIPIVTGLINLALKYDLPRVLREDC-SPPEVYTHTLHDEASYCHVLCALAARGKLTALRTTFAVTLVTALTDLELNWAQFMHDIRTGTVSEE----RISSAVVRDAVARRIGANPGLADALEAEFREGFEGIVPRIWPRVKFVECIFTG 309          
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A0D2QYB2_GOSRA (Uncharacterized protein (Fragment) n=7 Tax=Gossypium TaxID=3633 RepID=A0A0D2QYB2_GOSRA)

HSP 1 Score: 126 bits (317), Expect = 1.640e-28
Identity = 90/307 (29.32%), Postives = 149/307 (48.53%), Query Frame = 2
Query:   86 IMADTPPAIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKA-GSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTG---DAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
            +MA        K  +E     +++QE +LG IL+ N  TE  L   + G T    F++  P+  Y+ ++ Y+D I  G      L+ + ++G  LSSGT+GG PK+IP T + + V  A      ++M K  G     G+ +  L A  +V T  GL A+A++T      + + +L    TSPYE     +  +S Y  LL GL++R EV  I   FA+ V  G++ +E  WR+  ++++TG   D     G  +     +     L D  ++  + +        +EGIV +L+P+ K +  + TG
Sbjct:   33 LMATNDYESVLKMLEEITTNARQIQEQLLGEILSKNAETE-YLQGFLHGQTDKQLFKKNVPIVTYDHIKPYIDRIANGKASSDILLVEPLIGFSLSSGTSGGQPKLIPITAESANVTAALGNLHLSLMIKHFGDLSQVGKRMELLFAKPDVETPSGLKASAVTTRAFKESSFQAILPKLYTSPYETIFCPDTKQSTYCQLLFGLIQRDEVVVIGSIFAATVLRGIKFIENNWRELCSNIKTGKISDWITDSGCRKAASLILKPNPKLADLLEDTCSCK-------SWEGIVRKLWPKTKYIGTVCTG 331          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J8MAE8_9ROSI1.350e-3131.58Uncharacterized protein (Fragment) n=1 Tax=Gossypi... [more]
A0A1U8KM03_GOSHI1.300e-2930.92indole-3-acetic acid-amido synthetase GH3.17-like ... [more]
A0A1Y1IJM7_KLENI1.630e-2934.63Auxin-responsive GH3 family protein n=1 Tax=Klebso... [more]
A0A6J1ITV1_CUCMA4.190e-2931.02jasmonic acid-amido synthetase JAR1-like n=5 Tax=C... [more]
A0A6D2K5T7_9BRAS5.380e-2932.44Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
UPI0010A4C1645.380e-2930.93jasmonoyl--L-amino acid synthetase JAR6-like n=2 T... [more]
A0A1U8I3J4_GOSHI5.910e-2930.77indole-3-acetic acid-amido synthetase GH3.17-like ... [more]
A0A1B6PS82_SORBI6.440e-2934.36Uncharacterized protein n=8 Tax=Andropogoneae TaxI... [more]
A0A0U9HTE9_KLENI1.620e-2831.92Indole-3-acetic acid-amido synthetase-like n=1 Tax... [more]
A0A0D2QYB2_GOSRA1.640e-2829.32Uncharacterized protein (Fragment) n=7 Tax=Gossypi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3046493..3050760 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score132.5
Seed ortholog evalue3.3e-28
Seed eggNOG ortholog4533.OB07G31300.1
KEGG koko:K14487
KEGG Pathwayko04075,map04075
GOsGO:0008150,GO:0009314,GO:0009416,GO:0009628,GO:0009719,GO:0009725,GO:0009733,GO:0010033,GO:0042221,GO:0050896
EggNOG free text desc.GH3 auxin-responsive promoter
EggNOG OGs28KFB@1,2QSWB@2759,37SW4@33090,3GXBN@35493,3I4UI@38820,3KMX8@4447
COG Functional cat.S
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons6
Model size995
Cds size906
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817400.3018014-UTR-S-ischiensis_contig9:3046492..30465801622817400.3018014-UTR-S-ischiensis_contig9:3046492..3046580Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 3046493..3046580 +
1695741085.9106228-UTR-S-ischiensis_contig9:3046492..30465801695741085.9106228-UTR-S-ischiensis_contig9:3046492..3046580Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 3046493..3046580 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817400.3177278-CDS-S-ischiensis_contig9:3046580..30467841622817400.3177278-CDS-S-ischiensis_contig9:3046580..3046784Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3046581..3046784 +
1695741085.9330206-CDS-S-ischiensis_contig9:3046580..30467841695741085.9330206-CDS-S-ischiensis_contig9:3046580..3046784Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3046581..3046784 +
1622817400.3290496-CDS-S-ischiensis_contig9:3046916..30470271622817400.3290496-CDS-S-ischiensis_contig9:3046916..3047027Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3046917..3047027 +
1695741085.9443805-CDS-S-ischiensis_contig9:3046916..30470271695741085.9443805-CDS-S-ischiensis_contig9:3046916..3047027Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3046917..3047027 +
1622817400.3398643-CDS-S-ischiensis_contig9:3047499..30476821622817400.3398643-CDS-S-ischiensis_contig9:3047499..3047682Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3047500..3047682 +
1695741085.956226-CDS-S-ischiensis_contig9:3047499..30476821695741085.956226-CDS-S-ischiensis_contig9:3047499..3047682Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3047500..3047682 +
1622817400.3499913-CDS-S-ischiensis_contig9:3048651..30487281622817400.3499913-CDS-S-ischiensis_contig9:3048651..3048728Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3048652..3048728 +
1695741085.9747493-CDS-S-ischiensis_contig9:3048651..30487281695741085.9747493-CDS-S-ischiensis_contig9:3048651..3048728Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3048652..3048728 +
1622817400.360488-CDS-S-ischiensis_contig9:3049141..30493131622817400.360488-CDS-S-ischiensis_contig9:3049141..3049313Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3049142..3049313 +
1695741085.985409-CDS-S-ischiensis_contig9:3049141..30493131695741085.985409-CDS-S-ischiensis_contig9:3049141..3049313Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3049142..3049313 +
1622817400.3715825-CDS-S-ischiensis_contig9:3050601..30507601622817400.3715825-CDS-S-ischiensis_contig9:3050601..3050760Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3050602..3050760 +
1695741085.9988222-CDS-S-ischiensis_contig9:3050601..30507601695741085.9988222-CDS-S-ischiensis_contig9:3050601..3050760Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 3050602..3050760 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20765.1prot_S-ischiensis_contig9.20765.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 3046581..3050760 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20765.1

>prot_S-ischiensis_contig9.20765.1 ID=prot_S-ischiensis_contig9.20765.1|Name=mRNA_S-ischiensis_contig9.20765.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=302bp
MADTPPAIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGST
SVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTG
GPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVP
TKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLC
GLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGR
EELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCIT
TG
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mRNA from alignment at S-ischiensis_contig9:3046493..3050760+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20765.1 ID=mRNA_S-ischiensis_contig9.20765.1|Name=mRNA_S-ischiensis_contig9.20765.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4268bp|location=Sequence derived from alignment at S-ischiensis_contig9:3046493..3050760+ (Schizocladia ischiensis KU_0333)
GGGCACTGTTGGGTGTGCAAGGATCGTTCGGCTCGCGCACCAGCTATTCT AGGCGTATCACGCGCTCACACGGCGTTGTTGTAGCATCATGGCGGATACA CCGCCAGCCATTGCCTTTAAGCAGTTCCAGGAAGACTTGGGGTGTCCACA GGAAGTGCAGGAGGCGGTGCTGGGCGCAATCCTGGCCCACAACGAGGCCA CCGAACCCCTGCTCTCTCGCGGGATAACGGGCTCCACCTCGGTGGTTGAT TTCCGGCGCTTGCAGCCCGTCACGGACTATGAAGCGGTCCGGGTAAGGCG GCGGCGGCGGGTTTCCTAGCCTCTCTCCTCGCGCACCAGGCATTTGCAGT CGCATGTTCACCGTGGCCTTCAACGCCTGAACATTCACCCCGGTGCCCAT GCTGGCATGCGCTCGGTGCTGCAGGAATACGTTGATGCAATCACGGCAGG AGATAAGGACCCGTCCGCGCTCGTGGGCGACAAGGTCCTCGGGATGCTCT TGAGCTCGGGCACGACAGGCGGGCCCCCTAAAATGGTGCGTGTGTGTGTG CTCGCGCCTTCTGTCGGTCCATGTGTGTGTGTGTGTGCGCGCGCGATGTG TGTGTGTGTCTGTGCAACAAAATGAAACGCCTCGCCATGTTTTGCAACCC GTGAAACCGATGTTCGTCGTGTGTTTGTTCTACTCGGAGAGCCAACACAT ATTGCCTTCTTCAGGCAGCCCCGACCCCGACGCAAACAAGGCCCATCCCC AATTTTATCTTCGTGCCGATACCGACCCACGCGCACACCAACCGCTGCGC CAGGCGACCGACCGACTAACCCATGTGTCCTTTTGTGAACGAACCTCACT TGGTCTATCAGAGTGGCAAACAGCCGGAACTACTATACCACCGAGTATGT AACGCAAACTAAATGCAGACGGTGTTGGTGTGTACTACGAAGTACTTCGA AGCACTTGTATGTACTGTGTACTCTGCCGCAACCTACCTACCGATCACCC CGCCCAGATCCCCTGGACGGTCAAGCAGTCGACGGTGGGCATGGCGGGCT TCATGACCCAGGCCGCAATCATGGCGAAAGCGGGGAGCAACCCGATGGAG GGCCGGGCCATCAACTTCCTGCGGGCGGGGAAGGAGGTGCCCACTAAGTG CGGGCTGGTTGCAGCAGCACTGTCCACCCATCTCATCTTGGTGAGATGCC ACTGACTGGATACCTCGTTACAGTTTATGAGTATATGAATCACCACCACT GACTGGATAGCCCCTACCTGCCTGCCTGCGGGCTCGTCGCGGCAGCGCTG TCCACCCACCTCATCTTGGTGAGATGCCGCTGACTGGATACCTCGTTACA ATTTTACATGAATCACCGCCACTGACTGGATAGCCCCCTACCTGCCTGCC TGCGGGCTCGTTGCGGCAGCGCTGTCCACCCACCTCATCTTGGTGAGATG CTACTCAATTGCGTGTACATGGGACAACTACTACTTCGAAGTAATACTTG TACGAGAACAGTCAATCTCACACACGTGCGGTTGTACCTCGTTACAGTTT ATTTGAGTGGTAGATAAGCAGCGAATTCCAGGCCCCGTGCCAAAAGGCTC GTCCCGAAACGGGACTCAACGAAGCCCTTCTTCTCCTCGCAGGGCAAGAA GAACACAGTGTATATGCATCACCGCCACTGACTGGATAGCCCCTGCCTGC CTGCCTGCCTGCCTGTCCGCTTACCTGCCTGCCTCCCTTCCCGCTTCCCT CCCTGCCGGCCGGCTCGTGTGCTGCCTCCACCCCCCTCTTTCCCACCTGT TTTGCCTGCACGAGTTGGCGAAAGTTGTCCCTGGATAACTGTGGCCCTTC TGGTCTTTTTCGAGCACACCTGCATCCACTTACACGTCCTCGCTTCGTAT TCCAACAGTCTCTGCTCCTCCTCCTCCTCCTCCCCCCCCCCCCCCCCCCC TCCCCCCCCCCCCCCCTCCCCCTCCCCCCAACCCCTTCCTCCTCCTCCTC CTCCTCCTCACATATATCAACGCACTCACGCACTCACACACACACACATG CACACACCCGCCCGCCCATGCGCGCAGTCTCCAACCATCAAGCCTCCTCA CACATACTAACACACTCACACACACACACATGCATACACCCACCCGCCCG TGTCCACAGTCTCCCACCATCAAGCCCATGCTGGAGGCCAGCTGCACCAG CCCCTACGAGGCCTTCCTCATCCGCAACCCGGGCAGGTGACGATCACTAC TATAGGAGCACCCAGTTCTAAAATGGGACTACTGCTGATACGAGAACACT CAATCTCAGACACGTGCGATTGTGCTCCGTTACAATTTATATGAACTTGT TGGCCTTCCTCATCGGCAACCCGGGCAGGTGATAGTCGCTACTTCTAATA TAAGAACACTCGATTCTTGGCCCTTCTACCCCTGGGGTCCGTATAATCAT TGGAGTTTAGTGTATAGGTCTAGTTTAGCAGGGGCAAAAGGGTTAAATGG GAAAACTAAGTACTAATACGACAACAGTCAATCTCACACACGTGCGATTG TACCCCGTTACAAATTATATAAACTAATACGACAACAGTCAACCTCACAC ACGTGCGATTGTACCTCGTTACAATTTATCTGGATCACCTTCGGAGCAGG TCCATGTACGCGCACCTGCTGTGCGGGCTCCTCCGCAGGGGCGAGGTGCG GGAGATCCGGGGGAACTTTGCCTCCATCGTGTACGAGGGGCTGCGCACCC TCGAGACCCAGTGGCGGGACTTTGTCGCGCACGTCCGGACAGGGGACGCG CCGCCCTCATTTGGCGCAGGGGTGAGTGCAGAGTATGTGCATAAATATGA GTGAGTGTGTATGTGCGTGTGTGTGTGTGTGTGTTTGCGCGCCGGTTCTG AAGCCCGGGGCGACCGACACGCACGCGCCCCGTACTTGGAAGCGCATGCA CGGCTACAGTAGAGCTAGCTCCCCTTCAACTGCCTTCCAGGGTGCCTGCC GCACTCTGCTTTCCGAGCACAAGTCCTTTGCGCGGCTTGCTCCGCAATTC TAAGCACGGCTGGTATATTATATATACTACTCGTACGTAGTATGTACTCA CGTTGTGCTTGCCGTAGGCCCGAGACCATTGACCACGTGCCTCAGTCGAG ACGGACCAGGACCCCTCCCTCCCCTGGCACAGCCAGGGTGGGAGGGGGTG GCCACCCCCCCGCCAGAAGCGGAGGGTTCTGGCGGGGGGGTGGCCAAGTC CACCCTCCCCCCATCCCCGACTCGTGAGAGTCCGGGTGGGGCTCCCCTGC TGGATTACTACCCCCCCAAAACTCCTTCCTGTTGCGCGGCCGATGTCCCC TCTCTCACCCCGCCACCGCAGAGTATGTGATGCGACACGGTATAGTTCGA TTCGATACGATGTGTGCTCTAACTCACTGTACAGTAGTTTCACATCACAT CACATCACAAGTGTGATGTGACACGGTGTGATTCGATACGATGTGTACTC TAGCTCACTGTAGTTTCAGATCACATCACATCACATCACAAAAGATGCAA TGTGCACTCCAACTCACTGTAGTTTCACACCACGTCACATCACATGAAAC GTCCCCGCTCCCGCCCCGCCACTGCAGAGTAGGTATGTGATGTGACACGG TGTGATTCGATGCGATGTGTACTCTGTGGTTTCACATCACATCGCATCGC ATCACAAAGAACGCGGACACGGTGCGATTCGATGCGATGTCTACTCTAAC TCGCTGTAGTTTCACATCACATCACATCATAAACAACGTGGACACGGTGT GATTCGATGCGATGTGTACTCTAACTCACTGTAGTTTCACGTCACATCAC ATCACATCGCATCACATCATTAAAAACGTGACCGCAGATTCGATGCGATG CGTACTCTAACTCACTGTAGTTTCACATCACATCACATCACACGACAAAG AACGTGAACACGGTGTGATTCGATGCGATGTGTACTCCAACTCACTGTAG TCTCACATCACATCACATCGCAAAAAACGTGGCCGCAGATTCGATGTGAT GTGTACTCTAACTCAGTGTAGTTTCACATCATTTCACATCACAAAAAACG TGACCGCAGCGGGAGGAGCTCGCCGCGATCGCCGCCACCGCCGGGCTCCC CGACGGGGGGGACGAGGCCCTGGCCACCGAACTGGAAGGCGTTTTTGCGG GCGGGTTCGAGGGCATCGTGCCCCGCCTCTTCCCGCGGTGCAAGCTCGTG CAGTGCATCACGACTGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:3046493..3050760+

>mRNA_S-ischiensis_contig9.20765.1 ID=mRNA_S-ischiensis_contig9.20765.1|Name=mRNA_S-ischiensis_contig9.20765.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1812bp|location=Sequence derived from alignment at S-ischiensis_contig9:3046493..3050760+ (Schizocladia ischiensis KU_0333)
ATGGCGGATACACCGCCAGCCATTGCCTTTAAGCAGTTCCAGGAAGACTT
GGGGTGTCCACAGGAAGTGCAGGAGGCGGTGCTGGGCGCAATCCTGGCCC
ACAACGAGGCCACCGAACCCCTGCTCTCTCGCGGGATAACGGGCTCCACC
TCGGTGGTTGATTTCCGGCGCTTGCAGCCCGTCACGGACTATGAAGCGGT
CCGGATGGCGGATACACCGCCAGCCATTGCCTTTAAGCAGTTCCAGGAAG
ACTTGGGGTGTCCACAGGAAGTGCAGGAGGCGGTGCTGGGCGCAATCCTG
GCCCACAACGAGGCCACCGAACCCCTGCTCTCTCGCGGGATAACGGGCTC
CACCTCGGTGGTTGATTTCCGGCGCTTGCAGCCCGTCACGGACTATGAAG
CGGTCCGGGAATACGTTGATGCAATCACGGCAGGAGATAAGGACCCGTCC
GCGCTCGTGGGCGACAAGGTCCTCGGGATGCTCTTGAGCTCGGGCACGAC
AGGCGGGCCCCCTAAAATGGAATACGTTGATGCAATCACGGCAGGAGATA
AGGACCCGTCCGCGCTCGTGGGCGACAAGGTCCTCGGGATGCTCTTGAGC
TCGGGCACGACAGGCGGGCCCCCTAAAATGATCCCCTGGACGGTCAAGCA
GTCGACGGTGGGCATGGCGGGCTTCATGACCCAGGCCGCAATCATGGCGA
AAGCGGGGAGCAACCCGATGGAGGGCCGGGCCATCAACTTCCTGCGGGCG
GGGAAGGAGGTGCCCACTAAGTGCGGGCTGGTTGCAGCAGCACTGTCCAC
CCATCTCATCTTGATCCCCTGGACGGTCAAGCAGTCGACGGTGGGCATGG
CGGGCTTCATGACCCAGGCCGCAATCATGGCGAAAGCGGGGAGCAACCCG
ATGGAGGGCCGGGCCATCAACTTCCTGCGGGCGGGGAAGGAGGTGCCCAC
TAAGTGCGGGCTGGTTGCAGCAGCACTGTCCACCCATCTCATCTTGTCTC
CCACCATCAAGCCCATGCTGGAGGCCAGCTGCACCAGCCCCTACGAGGCC
TTCCTCATCCGCAACCCGGGCAGTCTCCCACCATCAAGCCCATGCTGGAG
GCCAGCTGCACCAGCCCCTACGAGGCCTTCCTCATCCGCAACCCGGGCAG
GTCCATGTACGCGCACCTGCTGTGCGGGCTCCTCCGCAGGGGCGAGGTGC
GGGAGATCCGGGGGAACTTTGCCTCCATCGTGTACGAGGGGCTGCGCACC
CTCGAGACCCAGTGGCGGGACTTTGTCGCGCACGTCCGGACAGGGGACGC
GCCGCCCTCATTTGGCGCAGGGGTCCATGTACGCGCACCTGCTGTGCGGG
CTCCTCCGCAGGGGCGAGGTGCGGGAGATCCGGGGGAACTTTGCCTCCAT
CGTGTACGAGGGGCTGCGCACCCTCGAGACCCAGTGGCGGGACTTTGTCG
CGCACGTCCGGACAGGGGACGCGCCGCCCTCATTTGGCGCAGGGCGGGAG
GAGCTCGCCGCGATCGCCGCCACCGCCGGGCTCCCCGACGGGGGGGACGA
GGCCCTGGCCACCGAACTGGAAGGCGTTTTTGCGGGCGGGTTCGAGGGCA
TCGTGCCCCGCCTCTTCCCGCGGTGCAAGCTCGTGCAGTGCATCACGACT
GGCCGGGAGGAGCTCGCCGCGATCGCCGCCACCGCCGGGCTCCCCGACGG
GGGGGACGAGGCCCTGGCCACCGAACTGGAAGGCGTTTTTGCGGGCGGGT
TCGAGGGCATCGTGCCCCGCCTCTTCCCGCGGTGCAAGCTCGTGCAGTGC
ATCACGACTGGC
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