mRNA_S-ischiensis_contig9.20764.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: D8LSM4_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM4_ECTSI) HSP 1 Score: 160 bits (406), Expect = 2.250e-42 Identity = 79/113 (69.91%), Postives = 89/113 (78.76%), Query Frame = 3
Query: 60 CVAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQI 398
C+A+SYGGR E+ AAR LA A+GRL P DIDE AL R LST LGIPDPDL+VRTSGESRLSN L+WQ AY+EL KAWP+FR DLVEAFRDYGRR+RR GKT EQ+
Sbjct: 258 CLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFGKTPEQM 370
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A6H5KLI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI8_9PHAE) HSP 1 Score: 162 bits (409), Expect = 5.060e-41 Identity = 80/113 (70.80%), Postives = 90/113 (79.65%), Query Frame = 3
Query: 60 CVAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQI 398
C+A+SYGGR E+A AAR LA A+GRL P DIDE AL R LST LGIPDPDL+VRTSGESRLSN L+WQ AY+EL KAWP+FR DLVEAFRDYGRR+RR GKT EQ+
Sbjct: 508 CLAISYGGRSELAAAARELAVEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFGKTPEQM 620
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A835ZI19_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI19_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.330e-39 Identity = 72/110 (65.45%), Postives = 88/110 (80.00%), Query Frame = 3
Query: 60 CVAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTA 389
C+AVSYGGRDE+ARAA+ +A VA GRLS +D+ E L LST + G+PDPDLI+RTSGE R+SNFLLWQ AY+ELY + KAWP+F+ ADLVEAF+D+G RQRR G A
Sbjct: 163 CLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVA 272
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: UPI001E329A8F (isoprenyl transferase n=1 Tax=Geomonas sp. RF6 TaxID=2897342 RepID=UPI001E329A8F) HSP 1 Score: 137 bits (346), Expect = 6.770e-35 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQIK 401
+A+SYGGR E+ AARRLA A+GRL P+ IDE + G SLST GIPDPDL++RTSGE R+SNFLLWQ AYAELYF + WPEF +L A +DY R+RR GKT++Q++
Sbjct: 133 LALSYGGRQEIISAARRLASEAAAGRLDPDSIDENSFGASLSTA--GIPDPDLLIRTSGEMRISNFLLWQLAYAELYFTEVNWPEFDRDELARALKDYQSRERRFGKTSDQLR 243
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: UPI00187258DD (isoprenyl transferase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187258DD) HSP 1 Score: 137 bits (344), Expect = 1.170e-34 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQI 398
+A+SYGGR E+A ARRLAE VA+G L PEDIDE + L T GIPDPDL++RTSGE RLSNFLLWQ AY+EL+F K WP+F ++DL A ++ RR+RR+G AE +
Sbjct: 136 IAISYGGRQEIAATARRLAEAVAAGELDPEDIDEDSFAAGLLTA--GIPDPDLVIRTSGEQRLSNFLLWQSAYSELFFVDKLWPDFDKSDLEAAVAEFRRRERRYGAAAESL 245
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A1G1I119_9BACT (Isoprenyl transferase n=1 Tax=Nitrospirae bacterium RBG_16_64_22 TaxID=1801708 RepID=A0A1G1I119_9BACT) HSP 1 Score: 136 bits (342), Expect = 4.000e-34 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQIK 401
+A++YGGRDE+ RA RRL +A G L P IDE A+ R+L T G+PDPDL++RTSGE R+SNFLLWQ AYAEL+F + WP+FRE D ++A D+ +R+RR G T EQ++
Sbjct: 151 LALNYGGRDEIVRAVRRLGREIAKGTLDPASIDETAISRALDTA--GLPDPDLLIRTSGEKRISNFLLWQTAYAELHFTETLWPDFREEDFLKAILDFQKRERRFGLTGEQVR 261
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A3M1L2B8_9DELT (Isoprenyl transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1L2B8_9DELT) HSP 1 Score: 135 bits (341), Expect = 5.330e-34 Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQI 398
+AVSYGGR+E+ARAARRLA V GRL PE IDE +L T G+PDPDL++RTSGE R+SNFLLWQ AY ELY + WP+FR + + A DY RRQRR GKTA QI
Sbjct: 152 LAVSYGGREEIARAARRLARQVRDGRLRPEQIDEQRFESALMTA--GVPDPDLLIRTSGEHRISNFLLWQLAYTELYVTETLWPDFRRDEFLRAIDDYRRRQRRFGKTAAQI 261
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A0K9I327_9DELT (Isoprenyl transferase n=1 Tax=Desulfocarbo indianensis TaxID=1348163 RepID=A0A0K9I327_9DELT) HSP 1 Score: 135 bits (340), Expect = 6.090e-34 Identity = 67/113 (59.29%), Postives = 84/113 (74.34%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQIK 401
+A+SYGGR E+ +AARRLAE V +GRL P IDEAAL L T G+PDPDL++RTSGE R+SNFL WQ AYAE YF + WP+FRE +L+ A R Y RQRR G+T +Q++
Sbjct: 145 LALSYGGRQEITQAARRLAEDVKAGRLEPAAIDEAALAGRLYTA--GMPDPDLLIRTSGEQRISNFLPWQTAYAEFYFTETLWPDFREPELMSALRAYAGRQRRFGRTGDQLE 255
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A1F9BPC5_9DELT (Isoprenyl transferase n=1 Tax=Deltaproteobacteria bacterium RBG_13_60_28 TaxID=1797833 RepID=A0A1F9BPC5_9DELT) HSP 1 Score: 135 bits (340), Expect = 6.910e-34 Identity = 66/113 (58.41%), Postives = 85/113 (75.22%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQIK 401
VA+SYGGR E+ RAA+ LA+ V +GRL PE+ID+A RSL T ++ PDPDL++RTSGE RLSNFLLWQ AY ELYF WP+FR+ + ++A +Y RR RR+G T EQI+
Sbjct: 143 VALSYGGRSEIVRAAQSLAQEVQAGRLRPEEIDQALFSRSLYTADM--PDPDLLIRTSGEYRLSNFLLWQSAYTELYFTDTHWPDFRQEEFLKALAEYQRRMRRYGLTQEQIE 253
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Match: A0A7C4STB4_9DELT (Isoprenyl transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C4STB4_9DELT) HSP 1 Score: 135 bits (339), Expect = 7.900e-34 Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 3
Query: 63 VAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELGIPDPDLIVRTSGESRLSNFLLWQGAYAELYFAKKAWPEFREADLVEAFRDYGRRQRRHGKTAEQI 398
+A+SYG R+E+ARA RRLA A+G+L P+DID A+ +L T L PDPDLI+RT GE RLSNFLLWQGAYAELYF+++ WP+F ADL+ A D+ R+RR G T EQI
Sbjct: 139 LALSYGSREEIARACRRLARRAAAGKLHPKDIDAGAIAAALDTRSL--PDPDLIIRTGGELRLSNFLLWQGAYAELYFSRRLWPDFTGADLIAAIADFQSRRRRFGLTDEQI 248 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20764.1 >prot_S-ischiensis_contig9.20764.1 ID=prot_S-ischiensis_contig9.20764.1|Name=mRNA_S-ischiensis_contig9.20764.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=120bp MTLCVAVSYGGRDEVARAARRLAEGVASGRLSPEDIDEAALGRSLSTGELback to top mRNA from alignment at S-ischiensis_contig9:3043569..3046031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20764.1 ID=mRNA_S-ischiensis_contig9.20764.1|Name=mRNA_S-ischiensis_contig9.20764.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2463bp|location=Sequence derived from alignment at S-ischiensis_contig9:3043569..3046031+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3043569..3046031+ >mRNA_S-ischiensis_contig9.20764.1 ID=mRNA_S-ischiensis_contig9.20764.1|Name=mRNA_S-ischiensis_contig9.20764.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=720bp|location=Sequence derived from alignment at S-ischiensis_contig9:3043569..3046031+ (Schizocladia ischiensis KU_0333)back to top |