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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 724 |
| Cds size | 444 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817373.471589-CDS-S-ischiensis_contig9:2987891..2988335 | 1622817373.471589-CDS-S-ischiensis_contig9:2987891..2988335 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2987892..2988335 + |
| 1695741064.359553-CDS-S-ischiensis_contig9:2987891..2988335 | 1695741064.359553-CDS-S-ischiensis_contig9:2987891..2988335 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2987892..2988335 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817373.4829037-UTR-S-ischiensis_contig9:2988335..2988580 | 1622817373.4829037-UTR-S-ischiensis_contig9:2988335..2988580 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2988336..2988580 + |
| 1695741064.374089-UTR-S-ischiensis_contig9:2988335..2988580 | 1695741064.374089-UTR-S-ischiensis_contig9:2988335..2988580 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2988336..2988580 + |
| 1622817373.4946735-UTR-S-ischiensis_contig9:2989250..2989284 | 1622817373.4946735-UTR-S-ischiensis_contig9:2989250..2989284 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2989251..2989284 + |
| 1695741064.3850875-UTR-S-ischiensis_contig9:2989250..2989284 | 1695741064.3850875-UTR-S-ischiensis_contig9:2989250..2989284 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2989251..2989284 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20758.1 >prot_S-ischiensis_contig9.20758.1 ID=prot_S-ischiensis_contig9.20758.1|Name=mRNA_S-ischiensis_contig9.20758.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=148bp
WGGPTSLAAWGARKRSSCSGAPFHGLPLGSRPCENPCFEGSAAFRTLRKA
SFPPRLPMYFRTRMWKCSECKSRHDTPHHSPIVYTSTSKQCNSAKHRLLR
AVTNTPRFAYCAANAPSVTAHRRTTHDGGICISTIGRATYRLQGCSY* back to topmRNA from alignment at S-ischiensis_contig9:2987892..2989284+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20758.1 ID=mRNA_S-ischiensis_contig9.20758.1|Name=mRNA_S-ischiensis_contig9.20758.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1393bp|location=Sequence derived from alignment at S-ischiensis_contig9:2987892..2989284+ (Schizocladia ischiensis KU_0333)
TGGGGTGGTCCTACTTCGCTGGCAGCATGGGGCGCGAGGAAGCGGAGCAG
CTGCTCAGGTGCACCGTTCCACGGACTCCCGCTGGGCAGTCGTCCTTGCG
AGAATCCGTGTTTCGAGGGTTCCGCGGCTTTTCGGACACTGAGAAAAGCA
AGCTTTCCGCCGCGACTGCCAATGTACTTCCGTACTCGTATGTGGAAGTG
TTCAGAGTGTAAATCACGACACGACACACCACATCACAGTCCTATAGTTT
ATACGAGTACTTCGAAGCAGTGCAATAGCGCAAAACATCGTCTTCTGAGG
GCGGTCACAAACACTCCAAGGTTTGCCTACTGTGCGGCGAATGCACCGAG
CGTGACCGCGCACCGTAGAACCACGCACGACGGAGGCATCTGCATCAGCA
CGATCGGCCGCGCTACTTATCGACTGCAAGGTTGTTCCTATTAAAAATGC
TGGAGGTGTGTTGTTCCTCTTACGATTACTACTGCAAGGTTTGTGATTTT
CGTCCTCGACGTGCGAATGAACCCCCGCCGAGCAGGGGTCGTCCCGAGGG
CACCTTCTTCCTCCGGCGGAAGGGCCCCAAGCGCCTGCTCCTGTCCTACG
TTGGGAGGGACCAGGGACACGACAAGGACCGGGACAAGAGAGACAAGGAC
GGCAGGGAGTGGGACAAGGACAGAGGAGAGAGAGACAAGGTTCGTTCCTC
CTTCTCCTCCTCCCCCCCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCT
CCTCCTCGTGCTCCTCCTCCTCTTCCTCCTCGTCCTCCTCCTCCTCCTCC
TCCTCCCCCCCCCTCCCCCGCCCTCGCTGTTTTTGCTCCGCACGCCTCAC
TGTGTAGATCGATTTCCCGAATTTTCCCGTGCGTGTCCGAGCAGTGTTCG
GCGAGCAAAACGCCCTCCTGAAAGGGGGCACGGGGGAGGGGGAAGACATC
TCCGAGAAACGTGGCACGTGATGTGATGTGCTCTCTACTGTACTGTATTT
ACCGTACTCGTACATTGTACTCGAGCACAGTATTAACAGGAACAAGCACG
GGGCGAGGTGCAGGCCACGTCACTAAAGACCTTAACAGTGGCCCTTCCTT
AGCTCGCCAGTATGTTGTACTGTAGTTTGACATGATAGAGTGTCACATCA
AGACCTCTCCGGCAAGTACGGCATGTACTTTGGAGGCGCTCTAATCCACG
GCGGTGTTTACCGCGCGGGTCGAACGGCGAGCGAGTGGGGCAGAGGGATA
GCAACAGGTGCGGCGCCCCAGAAAGCTTCGTGCCAAGGAGCTCAGCGCCC
CCGCGAAATTGTGGCAACACACACACACACACACACGCACAACAACCCGC
CGAATCCAGGACAAGGAATGGGGGGGCGAACACAAGCGCGAGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:2987892..2989284+ >mRNA_S-ischiensis_contig9.20758.1 ID=mRNA_S-ischiensis_contig9.20758.1|Name=mRNA_S-ischiensis_contig9.20758.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=888bp|location=Sequence derived from alignment at S-ischiensis_contig9:2987892..2989284+ (Schizocladia ischiensis KU_0333)
TGGGGTGGTCCTACTTCGCTGGCAGCATGGGGCGCGAGGAAGCGGAGCAG
CTGCTCAGGTGCACCGTTCCACGGACTCCCGCTGGGCAGTCGTCCTTGCG
AGAATCCGTGTTTCGAGGGTTCCGCGGCTTTTCGGACACTGAGAAAAGCA
AGCTTTCCGCCGCGACTGCCAATGTACTTCCGTACTCGTATGTGGAAGTG
TTCAGAGTGTAAATCACGACACGACACACCACATCACAGTCCTATAGTTT
ATACGAGTACTTCGAAGCAGTGCAATAGCGCAAAACATCGTCTTCTGAGG
GCGGTCACAAACACTCCAAGGTTTGCCTACTGTGCGGCGAATGCACCGAG
CGTGACCGCGCACCGTAGAACCACGCACGACGGAGGCATCTGCATCAGCA
CGATCGGCCGCGCTACTTATCGACTGCAAGGTTGTTCCTATTAATGGGGT
GGTCCTACTTCGCTGGCAGCATGGGGCGCGAGGAAGCGGAGCAGCTGCTC
AGGTGCACCGTTCCACGGACTCCCGCTGGGCAGTCGTCCTTGCGAGAATC
CGTGTTTCGAGGGTTCCGCGGCTTTTCGGACACTGAGAAAAGCAAGCTTT
CCGCCGCGACTGCCAATGTACTTCCGTACTCGTATGTGGAAGTGTTCAGA
GTGTAAATCACGACACGACACACCACATCACAGTCCTATAGTTTATACGA
GTACTTCGAAGCAGTGCAATAGCGCAAAACATCGTCTTCTGAGGGCGGTC
ACAAACACTCCAAGGTTTGCCTACTGTGCGGCGAATGCACCGAGCGTGAC
CGCGCACCGTAGAACCACGCACGACGGAGGCATCTGCATCAGCACGATCG
GCCGCGCTACTTATCGACTGCAAGGTTGTTCCTATTAA back to top
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