mRNA_S-ischiensis_contig9.20726.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A6H5L609_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L609_9PHAE) HSP 1 Score: 140 bits (353), Expect = 9.430e-35 Identity = 69/114 (60.53%), Postives = 85/114 (74.56%), Query Frame = 1
Query: 100 GGGGYEQASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERW 441
G G E ASL AL EFLRLLCENH MQDY+ QPDNLRSYN+V EV ++LQ L WV +D+V HWGID T+ LA V+ TL+EFAQGN+GNK +ATP+L ++ND+ R R+
Sbjct: 379 GEGEEEVASLSALMEFLRLLCENHYLDMQDYMRRQPDNLRSYNMVTEVCALLQGLEWVTLDDVRHWGIDARTIDLAFTVVRTLVEFAQGNEGNKRTIATPSLTGSINDLFRNRF 492
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.590e-34 Identity = 68/114 (59.65%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 100 GGGGYEQASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERW 441
G G E ASL AL EFLRLLCENH MQDY+ QPDNLR+YN+V EV ++LQ L WV +D+V HWGID T+ LA V+ TL+EFAQGN+GNK +ATP+L ++ND+ R+R+
Sbjct: 3432 GEGEEEVASLSALMEFLRLLCENHYLDMQDYMRRQPDNLRTYNMVTEVCALLQGLEWVTLDDVRHWGIDARTIDLAFTVVRTLVEFAQGNEGNKRAIATPSLTGSINDLFRKRF 3545
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A7S2SK74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK74_9STRA) HSP 1 Score: 105 bits (262), Expect = 8.480e-23 Identity = 52/110 (47.27%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 109 GYEQASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAH--WGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILR 432
G++++ + L E LRL+CE+H +QDYL +QPDNLRSYN+V EV S LQSL WV+ + + W ID + L +L L +FAQG++ N++ +ATP LI LND++R
Sbjct: 374 GHDESLILKLVEVLRLMCEDHYTQLQDYLRNQPDNLRSYNLVEEVVSYLQSLEWVMNPHTSQPEWNIDESNAELCRTILHCLTDFAQGSRANQVCIATPQLIICLNDLMR 483
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A7S1U756_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U756_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 6.080e-20 Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 142 EFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVV--VDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERW 441
EFLRL+CENH P+Q+YL QPDN+RS+NV+ EV LQ L WV+ N W ID +++ +A +++ LIE QGN N L+ P LI +NDIL E +
Sbjct: 37 EFLRLMCENHYRPLQNYLRVQPDNMRSFNVINEVVGYLQELEWVLDLYSNTKLWNIDHSSIHVAYELIQCLIELVQGNYQNTACLSRPNLILGINDILCEHY 138
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A507FK04_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FK04_9FUNG) HSP 1 Score: 64.3 bits (155), Expect = 2.260e-8 Identity = 37/116 (31.90%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 91 TVKGGGGYEQ---ASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDIL 429
+V G GG E +++ ++ L+LL E HN +Q+Y+ QPDN++++N++R+V L + V V H D + L +QV TLI+ +QG+ N++ + ++ +N IL
Sbjct: 2449 SVAGSGGSEDGEYSAIRSVMRLLQLLVEGHNFRIQEYMRIQPDNIKTFNLIRDVVDFLHAAVAV------H---DAQVIPLMIQVFDTLIDLSQGSTQNQVIIFQAKIVQAINYIL 2555
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A4P9W363_9FUNG (RyR and IP3R homology associated-domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W363_9FUNG) HSP 1 Score: 62.0 bits (149), Expect = 1.180e-7 Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 106 GGYEQASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVV-VDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERWVHARV 456
G E + + L+L+ E HN +Q+Y+ QPDN++S+++V++V L ++V + DN+A + +QV TLI+ AQG N++ + +I +N IL ++ H V
Sbjct: 160 GPQEYDIVRGVMRLLQLIVEGHNFKLQEYVRVQPDNIKSFDLVKDVVDYLHAIVPIANEDNIA----------IIVQVFDTLIDLAQGCTANQVSIFNAKVIQPVNTILSGKYAHCSV 267
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A1Y2B255_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2B255_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 3.400e-7 Identity = 37/124 (29.84%), Postives = 67/124 (54.03%), Query Frame = 1
Query: 91 TVKGGGGYEQ---ASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVT-LALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERWVHA 450
+V G GG E +++ ++ L+LL E HN +Q+Y+ QPDN++++N++R+V L S+V ID + + +QV TLI+ +QG N++ + ++ +N I WV +
Sbjct: 2332 SVAGSGGIEDGEYSAIRSVMRLLQLLVEGHNFRIQEYMRVQPDNIKTFNLIRQVVDFLHSVV----------SIDSVQIIPVLIQVFDTLIDLSQGCSQNQVTIFQSKVVHAVNYI----WVQS 2441
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A9V1H6_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1H6_MONBE) HSP 1 Score: 59.7 bits (143), Expect = 8.280e-7 Identity = 30/106 (28.30%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 115 EQASLHALAEFLRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILR 432
+ ++ + L+ +CE N ++ YL HQPDN+RS +++ E + S++ + N ++ L Q + TL+EFAQG+ N++ + ++ LN +LR
Sbjct: 1896 DDGNIELVLRVLQYMCEGFNMQLKAYLHHQPDNIRSIDIITETSEFFGSIIEQITAN---------SIELVTQTVETLVEFAQGSSVNQMAIFNAHIVDYLNALLR 1992
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A7S3D7F8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D7F8_9EUKA) HSP 1 Score: 55.5 bits (132), Expect = 5.150e-6 Identity = 32/98 (32.65%), Postives = 48/98 (48.98%), Query Frame = 1
Query: 148 LRLLCENHNGPMQDYLLHQPDNLRSYNVVREVASVLQSLVWV--VVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRE 435
L+L CENH P+Q+ + R V + L +W+ DN W DG + Q TLI+ AQG +GN+ +A L+ +ND+LR+
Sbjct: 37 LQLFCENHYNPLQNIV-------RECGAVTGTVAYLWDSLWLHRPQDNRVEWRCDGANAGVVAQAFETLIDMAQGCEGNREAVAGSRLVTIVNDVLRD 127 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20726.1 >prot_S-ischiensis_contig9.20726.1 ID=prot_S-ischiensis_contig9.20726.1|Name=mRNA_S-ischiensis_contig9.20726.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=147bp MQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALback to top mRNA from alignment at S-ischiensis_contig9:2850951..2854369- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20726.1 ID=mRNA_S-ischiensis_contig9.20726.1|Name=mRNA_S-ischiensis_contig9.20726.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3419bp|location=Sequence derived from alignment at S-ischiensis_contig9:2850951..2854369- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2850951..2854369- >mRNA_S-ischiensis_contig9.20726.1 ID=mRNA_S-ischiensis_contig9.20726.1|Name=mRNA_S-ischiensis_contig9.20726.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=882bp|location=Sequence derived from alignment at S-ischiensis_contig9:2850951..2854369- (Schizocladia ischiensis KU_0333)back to top |