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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 467 |
| Cds size | 288 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817367.6496727-UTR-S-ischiensis_contig9:2589667..2589735 | 1622817367.6496727-UTR-S-ischiensis_contig9:2589667..2589735 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2589668..2589735 - |
| 1695741061.041129-UTR-S-ischiensis_contig9:2589667..2589735 | 1695741061.041129-UTR-S-ischiensis_contig9:2589667..2589735 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2589668..2589735 - |
| 1622817367.6870148-UTR-S-ischiensis_contig9:2591214..2591325 | 1622817367.6870148-UTR-S-ischiensis_contig9:2591214..2591325 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2591215..2591325 - |
| 1695741061.080605-UTR-S-ischiensis_contig9:2591214..2591325 | 1695741061.080605-UTR-S-ischiensis_contig9:2591214..2591325 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2591215..2591325 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817367.6650043-CDS-S-ischiensis_contig9:2589735..2590009 | 1622817367.6650043-CDS-S-ischiensis_contig9:2589735..2590009 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2589736..2590009 - |
| 1695741061.05992-CDS-S-ischiensis_contig9:2589735..2590009 | 1695741061.05992-CDS-S-ischiensis_contig9:2589735..2590009 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2589736..2590009 - |
| 1622817367.6761334-CDS-S-ischiensis_contig9:2591200..2591214 | 1622817367.6761334-CDS-S-ischiensis_contig9:2591200..2591214 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2591201..2591214 - |
| 1695741061.0705116-CDS-S-ischiensis_contig9:2591200..2591214 | 1695741061.0705116-CDS-S-ischiensis_contig9:2591200..2591214 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2591201..2591214 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20676.1 >prot_S-ischiensis_contig9.20676.1 ID=prot_S-ischiensis_contig9.20676.1|Name=mRNA_S-ischiensis_contig9.20676.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=96bp
MTTTRSPAWTSLPSGKARTPPDLADCPPGRATTPCGGRAQACACVLACVR
GAWLAREPASQLAGVTGAPRSHGAVAAPGGRLCALVGVCACEKGT* back to topmRNA from alignment at S-ischiensis_contig9:2589668..2591325- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20676.1 ID=mRNA_S-ischiensis_contig9.20676.1|Name=mRNA_S-ischiensis_contig9.20676.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1658bp|location=Sequence derived from alignment at S-ischiensis_contig9:2589668..2591325- (Schizocladia ischiensis KU_0333)
GGGACGAGGAGGAGGAACAGGTTGAGGCGGAAGGGCCGGACCGGGAGACG
GACGAAGACGGCGAGGTAGAGATCATCGACCTTGCCATCCGCGGCAAGTG
GAGTTATCAGTATGACCACGACAAGGTGCGATGCTGTCTCTTCTTCTTAT
TCTTACTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTATTCTTC
ACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCGTCTTC
GTCGTCGTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCACCTC
CTCCTCCTCTCCTTCTCCTTCTGCTCGTACTCCTTCTCCTTCTCCTTCTT
CTTCTCCTTCTTCGTACTCCTTCTCCTTCTTCTTCTTCTTCTCCTTCTTC
TTCCTCCGAGGCCGTTGACCGTACAATGAACGAGCACTTCGAAGTACTTC
GAGGTGTGCTCGAAGGTGCCCCCCCCCCGTCCGTCCTCATCCAGCGGTGG
ACCTTTACTACAGTGTAGCTGCTGTTTCCCTCCTCCCAGTGCAGCACACC
CCTTTGCCCCCCCCCCCTCACCCCCCTCGGGCCGGGATCCTGCCATGGGT
TCTCATATATATATATGCTTGTCGTATACATATGCGAGACCATTGACCCC
GCGCCTCGGTCGAGAATACGAGTACGAGTATATATAGTTCGCAGTACGTC
GGAAGTACTCGGTACTTGGACATATGTAAGTATGTACTTCGTACTCACGT
CGGACAGGTTTACCCCATGTCCTGTGCATGCCACCTTGTACTTTGTATGT
ATGTACGGGACAGGACCCGTGGTGAACGACGGTGTGCCGTGCATGGAGAC
TGCAGTAGAACCCACGGGTTGGTTATCTATCCATGGAAGATGCTCCGTCT
CGCACGAGGCGCGGGGTCAATGGTCTCGGGACAACGGCAAGCACCACGTG
AGTACATATATATATCCATGGGGCGGATGTAGAGAGCGCTCAAGTATACA
GTAACACTCACCGTAACGTGGCGTGGTTAGATAAGTTAGCGAGGCTGAAA
TACAAAAGTAAGGTAGGGCTACGATACGGCAAGCCACTCATGAGTCCCCC
CCCCCCCCTGCTGCTGCCCCCCCACGCCCCACCCCCCCCGCCGTTCGCCT
GGGTGGGCCTCGACAGGTCACCCGCGTGGACTTCTCTCCCCAGCGGTAAA
GCGCGCACGCCTCCTGACCTGGCCGACTGCCCCCCTGGCCGAGCGACAAC
GCCGTGTGGGGGTCGAGCGCAGGCGTGCGCGTGCGTGCTTGCGTGCGTGC
GTGGCGCTTGGCTCGCCAGAGAGCCAGCGAGCCAGCTGGCCGGTGTGACT
GGGGCGCCTCGCTCGCATGGGGCGGTTGCCGCCCCCGGGGGGCGCCTGTG
TGCCTTGGTAGGCGTTTGTGCTTGTGAAAAGGGGACATAGAGGGCGAGCT
GATCGGATCCTCTTCAAAAACCGTTGGAGATGGGTTGGATATCACACGTT
TGTTTTGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:2589668..2591325- >mRNA_S-ischiensis_contig9.20676.1 ID=mRNA_S-ischiensis_contig9.20676.1|Name=mRNA_S-ischiensis_contig9.20676.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=576bp|location=Sequence derived from alignment at S-ischiensis_contig9:2589668..2591325- (Schizocladia ischiensis KU_0333)
ATGACCACGACAAGATGACCACGACAAGGTCACCCGCGTGGACTTCTCTC
CCCAGCGGTAAAGCGCGCACGCCTCCTGACCTGGCCGACTGCCCCCCTGG
CCGAGCGACAACGCCGTGTGGGGGTCGAGCGCAGGCGTGCGCGTGCGTGC
TTGCGTGCGTGCGTGGCGCTTGGCTCGCCAGAGAGCCAGCGAGCCAGCTG
GCCGGTGTGACTGGGGCGCCTCGCTCGCATGGGGCGGTTGCCGCCCCCGG
GGGGCGCCTGTGTGCCTTGGTAGGCGTTTGTGCTTGTGAAAAGGGGACAT
AGGTCACCCGCGTGGACTTCTCTCCCCAGCGGTAAAGCGCGCACGCCTCC
TGACCTGGCCGACTGCCCCCCTGGCCGAGCGACAACGCCGTGTGGGGGTC
GAGCGCAGGCGTGCGCGTGCGTGCTTGCGTGCGTGCGTGGCGCTTGGCTC
GCCAGAGAGCCAGCGAGCCAGCTGGCCGGTGTGACTGGGGCGCCTCGCTC
GCATGGGGCGGTTGCCGCCCCCGGGGGGCGCCTGTGTGCCTTGGTAGGCG
TTTGTGCTTGTGAAAAGGGGACATAG back to top
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