mRNA_S-ischiensis_contig9.20674.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: A0A6H5JJC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC9_9PHAE) HSP 1 Score: 332 bits (852), Expect = 1.360e-97 Identity = 180/388 (46.39%), Postives = 234/388 (60.31%), Query Frame = 3
Query: 150 QVVSQTGTSAWLLRATAFQRYLAYDIPLDQLPMTSTHNSFSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTLGEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVLASNQASSIVFSTISEVTEAVELVESFNPYFCKGPE-----SWHRVQGDGTHIQVVFDDTTVYEDVVGENEFLGEDLVQPVLECGHTPTFDRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDVSLNYNDTE 1298
+V QT TS WL RA A QRY+ YDIPL + +T+THNSFS D + +TH +EVVT Q Y+MT QL CLGVRGLE+D HY++EL G SA ++CHA + A + +LC FGW C AA D GED TGC PGAPT G EVA+WL ENA++VLFLK DSS+++ E VS I F G VIFSP DW+ FSG WPS A+L+ MG RV++A +++S++VFST S+ E + E+F+ C E SWHRVQGD ++ ++T++E V G +E L + V+ CG TPTFDR+DA L+ +T+WSW DRPE GF PRAAV ++ GRWTDV + + E
Sbjct: 49 RVYGQTETSDWLHRAAALQRYIGYDIPLSSITLTATHNSFSHDRNISTHANFEVVTAQVYSMTDQLSCLGVRGLEIDLHYIDELAVEGDEESA--------------IRMCHASEDVAEQMVDLCDTFGWDVCEAADIFDYGED-TGCRPGAPTARTGFEEVASWLFLEENANEVLFLKLDSSLNDEDETVSTIVSDVF---------------GEDVIFSPTDWEEFSGSDDWPSPAELVAMGTRVIIAGSESSTLVFSTDSDAIEVLTAAENFDTSECVDVEGFPEPSWHRVQGDMVEYRLDRANSTIFELVPGSDEALTSSMTANVMNCGFTPTFDRLDADLMESTIWSWDTDRPETGFDLPRAAVISSSGGRWTDVETDSDSGE 406
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: D7FR16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR16_ECTSI) HSP 1 Score: 302 bits (773), Expect = 3.190e-95 Identity = 164/365 (44.93%), Postives = 217/365 (59.45%), Query Frame = 3
Query: 219 YDIPLDQLPMTSTHNSFSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTLGEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVLASNQASSIVFSTISEVTEAVELVESFNPYFCKGPE-----SWHRVQGDGTHIQVVFDDTTVYEDVVGENEFLGEDLVQPVLECGHTPTFDRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDVSLNYNDTE 1298
YDIPL +T+THNSFS D + +TH +EVVT Q Y+MT QL CLGVRGLE+D HY++EL G SA ++CHA + A + +LC FGW C AA D ++DTGC PGAPT G EVA+WL ENA++VLFLK DSS+++ E VS I F G VIFSP DW+ FSG WPS A+L+ MG RV++A +++S++VFST S+ E + E F+ C E SW+RVQGD ++ ++T++E V G +E L + V+ CG TPTFDR+DA L+ +T+WSW DRPE GF PRAAV ++ GRWTDV + + E
Sbjct: 15 YDIPLSSKTLTATHNSFSHDRNISTHANFEVVTAQVYSMTDQLSCLGVRGLEIDLHYIDELAVEGDEESA--------------IRMCHASEDVAEQMVDLCETFGWDVCEAADIFDY-DEDTGCRPGAPTARAGFEEVASWLFLEENANEVLFLKLDSSLNDEDETVSTIVSDVF---------------GEDVIFSPTDWEEFSGSDDWPSPAELVAMGTRVIIAGSESSTLVFSTDSDAVEVLISAEDFDTSECADVEGFPEPSWYRVQGDMVEYRLDRANSTIFELVPGSDEALTSSMTDNVMNCGFTPTFDRLDADLMESTIWSWDTDRPETGFDLPRAAVISSDGGRWTDVETDSDSGE 349
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: A0A835YZU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU0_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.920e-57 Identity = 142/418 (33.97%), Postives = 200/418 (47.85%), Query Frame = 3
Query: 120 AALALVLCPLQVVSQTGTSAWLLRATAFQRYLAYDIPLDQLPMTSTHNSFSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTLGEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVLAS-NQASSIVFSTISEVTEAVELVE--SFNPYFC-----------------------KGP-------ESWHRVQGDGTHIQVVFDDTTVYEDVVGENEFLGEDLVQPVLECGHTPTFDRMDAGLLAATVWSWAEDRPEPGFLEPRA-AVAAAVDGRWTD 1271
A +A L + +QTGTSAWLLRAT Q YL Y+ + +P+T+THNS+S D DP T +EV NQ +++ TQLRCLG RG E+D H++ + AS ++CHAGR AA +LC W+ C G D G T C APT GE L +A WL+ P NA + L +K ++ M++ L+S E A G + ++S D++ G WP+ A + GK+++ S N+ ++V + + ++V+ S + C GP +RVQGD T +Q TV+E +FL +LV+P C PTFDR+DA LLA+TVWSWAE P P A +A DGRW D
Sbjct: 9 ALIAPALLAARARAQTGTSAWLLRATQLQHYLTYEHTVQTIPLTATHNSYSSDYDPRTRAYFEVQANQIFDIPTQLRCLGTRGFEIDVHWLGSQAASDADASG--------------LRVCHAGRGAAIYAYQLCTEMEWKKCNECGVEDFGPQSTICRRDAPTFGEVLQGIADWLDDPANAQEFLSVKLETRMNSPPGLLSQ--EIARVVGADR-------------VYSAQDFEDDGG--EWPTVASAVARGKQILFQSLNEVGALVLAYTEFAIKPAQIVDLCSASGPLCDDALYREAENTTGSTSSGLSLSDSGPPLDTICFRDVYRVQGDATALQFDAGGQTVFEYAFPPEDFLSAELVRPAQLCAFVPTFDRVDAALLASTVWSWAEGAPAAALPPPNTCAYVSAADGRWHD 395
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: D8LIQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ2_ECTSI) HSP 1 Score: 160 bits (404), Expect = 6.560e-40 Identity = 100/292 (34.25%), Postives = 142/292 (48.63%), Query Frame = 3
Query: 468 ATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTLGEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDD---WQSFSGYGRWPSTAQLLEMGKRVVLASN-QASSIVFSTISEVTEAVELVESFN----PYFCKGP-------ESWHRVQGDGTHIQVVFDDTTVYEDVVGENEFLGEDLVQPVLECGHTPTFDRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDVSLNYNDTE 1298
AT +CH +A + ELC+ W C A G D G DDTGC AP+L E E++AWL+ PEN++++LF+K + + L+ + F G+ ++F P D W SG +WP+T L+ GKR+V +N + + IS +A L N + P SW RVQG+ + + + D T+Y + +EF G L+CG PTFDRMD+ LL AT+WSW E P F PRAAV GRWT S + ++ E
Sbjct: 10 ATLVCHTRPSSAQEIHELCSRLRWYLCEALGIQDFG-DDTGCSSTAPSLKETFDEISAWLDLPENSEELLFIKIEDYTGDNVSLLPDYITTVF---------------GTEIVFGPLDFIEWNRISGSEQWPTTEYLVSQGKRLVFGTNGEEDADTMFRISRENDADGLFHEDNISAVRFRTSAPCSTRTRSPSWSRVQGEASTWVIEYTDVTLYALLPEADEFFGASDAMDALKCGLIPTFDRMDSRLLEATMWSWEEGEPHAYFSSPRAAVVHQETGRWTSGSASTSEEE 285
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: A0A6H5K5A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A0_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 5.010e-13 Identity = 53/153 (34.64%), Postives = 78/153 (50.98%), Query Frame = 3
Query: 468 ATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTLGEGLGEVAAWLERPENADQVLFLKF-DSSMDNYTELVSAIAESAFTFGGEANG---GNASGSNGSSVIFSPDD---WQSFSGYGRWPSTAQLLEMGKRVVLASN 905
AT +CH +A + E+C+ W C A G D G DDTGC AP+L E E++AWL+ PEN++++LF+K D + DN +V A F + + G+ +F P D W S +WP+T L+ GKR+V +N
Sbjct: 10 ATLVCHTRPSSAQEIREVCSRLRWYLCEALGIKDFG-DDTGCSSTAPSLKETFDEISAWLDLPENSEELLFIKIEDYTGDNVGIIVVLCAVCCFRLLSVSVSLLPDYITTVFGTKSVFGPLDFIEWNRISETEQWPTTEYLVSQGKRLVFGTN 161
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: G5A030_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A030_PHYSP) HSP 1 Score: 68.2 bits (165), Expect = 2.310e-8 Identity = 99/417 (23.74%), Postives = 159/417 (38.13%), Query Frame = 3
Query: 156 VSQTGTSA---WLLRATAFQRYLAYDIPLDQLPMTSTHNS--------------FSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTL--------GEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVLASNQASSIVFSTISEVTEAVELVESFNPYFCKGPESWHRVQGDGTHIQVVFDD---TTVYEDVVGENEFLGEDLVQPVLECGHT-----PTF----------DRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDVS 1277
V + GT+ W+ RA +QR L+Y L + +THNS F+ + + +Y +NQ ++T QL LGVR LELD HY +S + + + AAA +S L ++ A V G + GC P + E L E+A WL + V++ + + Y++ + + TFG ++FSP D +S G + +L+ GK+V+L + ++ + E+ V S + GT ++ + T+ ED + G V E GH P F D +D ++AA VWSWAE+ P+ + A +A DGRW V+
Sbjct: 414 VCEAGTALIEPWVSRAITYQRNLSYAETLCYAEIPATHNSVITRARGYGNRDQLFNAKLNASNADSYMRTSNQYLSVTDQLD-LGVRFLELDVHYF---------------ASSLRSAHCSEFGIAFVDDAAAALVSALGSVL--DASGEDSTVQWGSELVGCLPSLSGIKADEQRLHNESLAEIATWLSSHPSDLAVIYTEIGDEVGTYSQTDALLELYTTTFG--------------DMLFSPSDLKSAGGDWNGFTLEELIGQGKQVILVTTPEANDQMFYMRELCAGWADVPSSTTG--SAGTFFGETMNAGTLVRAFKSELHYATLTEDALSG----GSVEVDTAAEPGHVNASTLPVFVAAGVNILAPDELDGTIMAALVWSWAENEPDVDTVT--AVQLSAADGRWYGVA 790
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: A0A225X2R0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2R0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.900e-8 Identity = 98/416 (23.56%), Postives = 156/416 (37.50%), Query Frame = 3
Query: 180 WLLRATAFQRYLAYDIPLDQLPMTSTHNS--------------FSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGRE-----AAASLSELCALFGWQACAAAGFVDLGEDDT--------GCDPGAPTL--------GEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVLASNQASSIVFSTISEVTEAVELVESFNPYFCKGPES--WHRVQGDGTHIQV---VFDDTTVYEDVVGENEFLGEDLVQP-VLECGHTPTF----------DRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDV 1274
W+ RA +QR L+Y L + +THNS F+ + + +Y +NQ ++T QL LG R +ELD HY FA++ + G E A+A +S L ++ D GED T GC P + E L E+A WL + V++ + + Y++L + + TFG ++FSP +++S G + +L+ GK+V+L + ++ + E+ V P G + GT ++ V T+ ED + + +P L P F D +D ++AA VWSWAE+ EP A +A DGRW V
Sbjct: 262 WVARAITYQRNLSYAETLCYAEIPATHNSVITQARGYGNRDQVFNAKLNASNAASYMRTSNQFLSLTDQLD-LGARFIELDVHY--------------------FASSLRSAHCSEFGIEFIDDAASALVSSLKSV----------LEDSGEDTTVQWGSELVGCLPSLSGIKADEQRLHNESLAEIATWLSTHPDELIVIYTEIGDEVSTYSQLDAVLELYTNTFG--------------DLLFSPSNFESAGGDWNEFTLEELITQGKQVILVATPEANDQMFYMRELCSGWADV----PSSTTGASGTFFGETMNAGTIVRAFKSVLHYATLSEDALSGGSVEVDTATEPGYLNSTSLPVFVKAGVNILAPDGLDGTVMAAMVWSWAEN--EPDVDSATAVQLSAADGRWYGV 626
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: A0A6A4BEN4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4BEN4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 5.300e-8 Identity = 100/430 (23.26%), Postives = 157/430 (36.51%), Query Frame = 3
Query: 156 VSQTGTSA---WLLRATAFQRYLAYDIPLDQLPMTSTHNS--------------FSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGREAAASLSELCALFGWQACAAAGFVDL-GEDDT--------GCDPGAPTL--------GEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVL-ASNQASSIVF---------------------STISEVTEAVELVESFNPYFCKGPESWHRVQGDGTHIQVVFDDTTVYEDVVGENEFLGEDLVQPVLECGHTPTFDRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDVS 1277
V + GT+ W+ RA A+QR L+Y L + +THNS F+ + + +Y +NQ ++T QL LGVR LELD HY A++ + H A + + A A +D GED T GC P + E L EVA WL N V++ + + ++++ + + FG ++FSP D + G + +L+ GK+V+L A+ +A+ +F + E A LV +F S + G + + V + G +++ P D +D ++AA VWSWAED EP A +A DGRW V+
Sbjct: 404 VCEAGTALIEPWVARAIAYQRNLSYAETLCYAELPATHNSVITRARGYGNRDQLFNAKLNASNSASYMRTSNQFLSLTDQLD-LGVRFLELDVHYF-----------------------ASSLRSAHCSEFGIAFVDDAAAAL---LSALGSVLDASGEDSTVQWTSALVGCLPSLSGIKADEQRLHNESLAEVATWLSSHPNDLVVIYTEIGDEVASFSQTDALLKLYTTVFG--------------DLLFSPSDLDTAGGDWNSFTLDELIGRGKQVILVATPEANDRMFYMRELCAGWADVPSSTAGSSGTFFGETMNAGSLVRAFKSELHYATLSEDALSGGSVEVDTATEPGHVNASSLPVFVAAGVNVLAP----------DELDGTVMAALVWSWAED--EPHVDTATAVQLSAADGRWYGVA 780
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: H3H2E2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2E2_PHYRM) HSP 1 Score: 63.5 bits (153), Expect = 6.480e-7 Identity = 93/411 (22.63%), Postives = 160/411 (38.93%), Query Frame = 3
Query: 156 VSQTGTSA---WLLRATAFQRYLAYDIPLDQLPMTSTHNS--------------FSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHAGREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTL--------GEGLGEVAAWLERPENADQVLFLKFDSSMDNYTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQSFSGYGRWPSTAQLLEMGKRVVLASNQASSIVFSTISEVTEAVELVESFNP-----YFCKGPESWHRVQG--DGTHIQVVFDDT----TVYEDVVGENEFLGEDLVQPVLECG-HTPTFDRMDAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRWTDVS 1277
V + GT+ W+ RA +QR L+Y L M +THNS F+ + + + +Y +NQ ++T QL LGVR LELD HY + + F +A+A + G AS + V G GC P + E L E+A WL + V++ + + +++ + + TFG ++FSP ++ G + +L+ GK+V+L + ++ + E+ V S + +F + + V+ H + +D+ +V D E L + ++ G + D +D ++AA VWSWAE+ P+ G A ++ DGRW V+
Sbjct: 410 VCEAGTALIEPWVARAITYQRNLSYAETLCYAEMPATHNSVITQARGYGNRDQLFNANLNASNADSYMRTSNQFLSLTDQLD-LGVRFLELDVHYFASSLRSAHCSD----FGIAFVDSASAGLVSSLGSVLDASGED-------------STVQWGSALVGCLPSLSGIRADEQRLHNESLAEIATWLSSHPDDLVVIYTEIGEEVSTFSQTDALLELYTNTFG--------------DLLFSPSNFDDAGGDWNGFTLEELVSQGKQVILVATPEANDQMFYMRELCAGWADVPSSSTGASGTFFGETMNAGTLVRAFKSELHYATLTEDSLSGGSVELDTASEPGHLNASSLPVFVDAGVNILAPDGLDGSVMAALVWSWAENEPDVGTAT--AVQLSSADGRWYGVA 786
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Match: A0A537ZE34_9ACTN (Uncharacterized protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZE34_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 9.500e-6 Identity = 105/404 (25.99%), Postives = 151/404 (37.38%), Query Frame = 3
Query: 141 CPLQVVSQTGTSA-------WLLRATAFQRYLAYDIPLDQLPMTSTHNSFSWDGDPTTHVAYEVVTNQAYNMTTQLRCLGVRGLELDPHYVEELDPAGPGASAPPPSSPTFATAANATKLCHA-GREAAASLSELCALFGWQACAAAGFVDLGEDDTGCDPGAPTLGEGLGEVAAWLERPENADQVLFLKFDSSMDN---YTELVSAIAESAFTFGGEANGGNASGSNGSSVIFSPDDWQ-SFSGYGRWP---STAQLLEMGKRVVLASNQASSIVFSTISEVTEAVEL--VESFNPY-FCKGPESWHRVQGDGTHIQVVFDDTTVYEDVVGEN--------EFLGEDLVQPVLECG-HTPTFDRM--DAGLLAATVWSWAEDRPEPGFLEPRAAVAAAVDGRW 1265
C L + Q G W+ R FQ L +PL THNSF+ P T + +NQ + QL + VR LELD H++ ++ A NA +CHA G + E + GC P L + L E+A WL P N QVL L + + + Y + V + +S +GSS+I+ P Q + G P S + G +VV+ N S S VE + PY C ++ R D T + ++D+T V E L V + CG + FD++ D G +AAT+WSWA+D+P + R AV D RW
Sbjct: 61 CQLPLGHQVGDGVVDAYRKTWVHRTAQFQYGLGNGVPLRATNWLGTHNSFNSVSYPPT--LSQTDSNQQLTLPQQLD-IDVRSLELDVHWIHSVN----------------ANLQNAVVVCHARGPD--------------------------EQNLGCTNERP-LKQVLPEIANWLNAPGNRRQVLLLYLEDELGDPAGYAQTVQVL-DSVLKR-----------PDGSSLIYRPRASQMTAKGCVDLPLGISRDDIRRAGAQVVIVGNCRSGWASDVFSWDDVHVESGSTPGYRPYPACD--TTYSRPVYD-TELVRYYEDSTWLSSAVNPTGSPDQHAAESLTPSKVSMMTACGVNLFGFDQILPDDGRIAATIWSWAQDKPSRA--DGRCAVQRP-DSRW 400 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20674.1 >prot_S-ischiensis_contig9.20674.1 ID=prot_S-ischiensis_contig9.20674.1|Name=mRNA_S-ischiensis_contig9.20674.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=464bp MGLPRLAHRAALALVLCPLQVVSQTGTSAWLLRATAFQRYLAYDIPLDQLback to top mRNA from alignment at S-ischiensis_contig9:2524499..2535802- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20674.1 ID=mRNA_S-ischiensis_contig9.20674.1|Name=mRNA_S-ischiensis_contig9.20674.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11304bp|location=Sequence derived from alignment at S-ischiensis_contig9:2524499..2535802- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2524499..2535802- >mRNA_S-ischiensis_contig9.20674.1 ID=mRNA_S-ischiensis_contig9.20674.1|Name=mRNA_S-ischiensis_contig9.20674.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2784bp|location=Sequence derived from alignment at S-ischiensis_contig9:2524499..2535802- (Schizocladia ischiensis KU_0333)back to top |