mRNA_S-ischiensis_contig9.20646.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A6U4KL70_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KL70_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.910e-69 Identity = 131/275 (47.64%), Postives = 169/275 (61.45%), Query Frame = 2
Query: 818 ETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVG-DPVE---------EVTRAPDKTDLML----DALAEAATREQREYESYIKGLGKVPSHSMVEVD-EGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLVGN-DHDTIANGQQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEEQGNRSV 1594
E L+ I G +EV ++ K M+ RGLS+EQI AY+G D V+ V P+ ++ DA + + E + LGKVPSH +VE+D E G+P+ + RFVYVDEY+CIGCTHCA AP TFFMEDD+GRARVFQQ GD I TA+ CPVDCIHYV ++EL LE+EREG++INFK RLVG+ + I G Q IS N S RC+NCPT GC+NCPMY VG+NP Y +++ EI + K L + G +
Sbjct: 41 EGLSTIAGMEEVEELRRQELFAQKYNNMRERGLSNEQIKAYLGSDAVDAFLAVEAAASVVVEPEDVVTIIAPGGDAFQQTTSTEDLQRAEL---LGKVPSHQLVELDDETGEPI-LPRFVYVDEYSCIGCTHCASHAPETFFMEDDNGRARVFQQGGDAMNVIRTAVSLCPVDCIHYVPWEELVELEQEREGLDINFKGRLVGSAEFANIKGGMQDISSNRSARCSNCPTNGCFNCPMYGVGFNPDYIKKRKEIAKRAANKKLKALQDISGEGDI 311
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A6H5L599_9PHAE (4Fe-4S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L599_9PHAE) HSP 1 Score: 236 bits (602), Expect = 1.170e-66 Identity = 120/226 (53.10%), Postives = 153/226 (67.70%), Query Frame = 2
Query: 818 ETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVG---------DPVEEV-TRAPDKTDLMLDALAEAATREQREYESYIKGLGKVPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLVGNDHDTIANGQQVISGNESMRCANCPTRG 1465
+ +NA+ G +++R+M+ K KRA M+ RGLS+EQIAAY+G EE RA + +AA + + + + L PS S+V+ DE G P++ DRFVYVDEYTCIGCTHC H APSTFFME++ GRARV+QQ D A + TAI +CPVDCIHYV F EL RLE+EREGI+INFKA+LVGNDHD +ANG Q ISG+ MRC NCP++G
Sbjct: 219 KAINAMQGAEQLREMESMTAKDQKRAEMEQRGLSEEQIAAYLGVDSSKEPPKSKAEEAKVRADQAAARAFEKFNQAAFVDSSAWRAEEELLKVAPSSSLVKKDEDGVPIE-DRFVYVDEYTCIGCTHCNHEAPSTFFMEEEFGRARVYQQGRDTAEAVQTAILSCPVDCIHYVDFPELVRLEKEREGISINFKAKLVGNDHDNVANGMQRISGDRGMRCDNCPSKG 443
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: W7TYZ0_9STRA (Ferredoxin n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYZ0_9STRA) HSP 1 Score: 220 bits (560), Expect = 4.290e-63 Identity = 121/284 (42.61%), Postives = 166/284 (58.45%), Query Frame = 2
Query: 746 SGDEDVGVSTNFAKKAVDYGEAPQETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVTRAPDKTDLMLDALAEAATREQREYESYIKGLGKVPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLVGNDHDTIANG----QQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEEQGN 1585
SG+ED + K+ V G E + G +++ ++ +++ + + M A G S Q++AY G + E+ + L + PSH V+ DE G + RFVYVDEYTCIGCT+CA TAP+TF+M+D+HGRARVFQQ D TI TAIETCPVDCIHYV F+EL RLE+ER G+ IN+KARLVG+D ++G Q ISGN+ RC NCP+RGC+NCPM+ VG NP YQ ++ +I K+ + +K +G
Sbjct: 13 SGEEDGTGFSVVRKRGVVAGPGGYEDI----GPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETG------------------------FTPKLQETPSHQFVDRDEEGT-LKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGG 267
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A4D9D529_9STRA (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D529_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.960e-55 Identity = 119/285 (41.75%), Postives = 164/285 (57.54%), Query Frame = 2
Query: 746 SGDEDVGVSTNFAKKAVDYGEAPQETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVTRAPDKTDLMLDALAEAATREQREYESYIKG-LGKVPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLVGNDHDTIANG----QQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEEQGN 1585
SG+ED + K+ V G E + G +++ ++ +++ + + M A G S Q++AY G + E+ E+ +K L + PSH V+ DE G + RFVYVDEYTCIGCT+CA TAP+TF+M+D+HGRARVFQQ D TI TAIETCPVDCIHYV F+EL RLE+ER G+ IN+KARLVG+D ++G Q ISGN+ RC NCP+RGC+ VG NP YQ ++ +I K+ + +K +G
Sbjct: 13 SGEEDGTGFSVVRKRGVVAGPGGYEDI----GPEDMAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVEL-------------------------ETGLKPKLQETPSHQFVDRDEEGT-LKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFXXXXXGVGENPEYQRKQRQIAQKRERRRASKDNSSEGG 267
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A7S2ENQ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENQ4_TRICV) HSP 1 Score: 196 bits (499), Expect = 1.850e-53 Identity = 136/350 (38.86%), Postives = 179/350 (51.14%), Query Frame = 2
Query: 662 RWDQVSWGSDVSEETPSWYSDIGGPTGGSGDEDVGVSTNFAKKA------VDYGEAPQETLNAILGGD---EVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVTRAPDKTDLMLDALAEAATREQRE-YESYIK----------------GLGKVPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLV-------GNDH----DTIANGQQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEEQGNRSVEL 1600
R D +W + VS E TG G++D T AK A D GEA + L AI + +++ D A K M+ G + I++ +G +E L+ + +A T E E +E++ + L +V SH VE DE + VYVDE+TCIGCT+CA A STFFM ++HGRARVFQQ GD TI AIETCPVDCIHYV +DEL RLE ER NINFKARLV G H ++ Q ISGN + RC NCP+RGC +CPMY +G NP +++ K + ++ A+ L K E NRS +L
Sbjct: 23 RADGTAWTAFVSSEEEG--------TGIDGEDDP---TKDAKNADAVDGLTDDGEAWLDALAAITASEIQFNIKEADRA----DKVRQMQEWGFDGDSISSTLGVATDET----------LERITDAETGEVNEAFETFKEVTAESGFGLYVGDGEVDLNEVESHGTVERDEETGEAVRTQMVYVDEHTCIGCTNCAMIAQSTFFMHEEHGRARVFQQWGDDDETIQVAIETCPVDCIHYVPYDELVRLEVERRDQNINFKARLVNQGEYGGGTSHRVGGSSVFTAPQKISGNMAPRCNNCPSRGCRDCPMYGIGENPEFKK-KEQARKERRARKLMKEKMESENRSADL 346
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A7S1B2W1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B2W1_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.080e-52 Identity = 135/336 (40.18%), Postives = 178/336 (52.98%), Query Frame = 2
Query: 680 WGSDVSEETPSWYSDIGGPTGGS-----GDEDVGVSTNFAKKA-----VDYGEAPQETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVTRAPDKTDLMLD---ALAEAA------TREQREYESYIKGLGKVPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLV-------GNDHDTIANG---QQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEEQGNRSVEL 1600
W D S T W + + G ED ++F+ A VDY E + L A+ +EV ++ ++ K M+ G + +QI+ + + + +D A + AA T ++ E + ++ SH VE E G+ + + VYVDE TCIGC +CA A STFFME +HGRARVF+Q GD TI AIETCPVDCIHY+ +DEL RLE ER G NINFKARLV G H NG QVISGN RC NCP+RGC NCPMY VG NP +Q+++ E +++K K L K EQ +RS EL
Sbjct: 115 WSIDGSGTTDPWSQQLNADENVNFSQTDGAEDSVSISDFSSMALSDDDVDYSENWLDALAAVAR-EEVSFIENDAERAEKAREMQDLGFTPKQISGALNVATSSELEDEEAGEEFVDFQKATSGAAGGFGMVTYDEDEIDKELR-----ESHKSVERGENGELIRT-QMVYVDEVTCIGCYNCAMIAQSTFFMEPEHGRARVFEQWGDDDETIQVAIETCPVDCIHYIPYDELERLEIERRGQNINFKARLVNQGEYGGGTGHRVGGNGFTGAQVISGNLGNRCNNCPSRGCQNCPMYGVGMNPDFQKKEDERKSRKKEKQL-KDQLEQLDRSAEL 442
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A7S2BL04_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BL04_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.090e-51 Identity = 112/272 (41.18%), Postives = 156/272 (57.35%), Query Frame = 2
Query: 812 PQETLNAILGGD-EVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVT--RAPDKTDLMLDALAEAATREQREYESYI--KGLGKVPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLV------GNDHDTIANG------QQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEE 1576
P + L+ + + E RD K ++ ++++ L+DEQI Y+ + EV+ P + E + + + +G V S+ +VE+DE G+P +RFVYVDE++CIGCT+CA A STF ME++HGRARVF Q+GD T+ AI+TCPVDCIHYV ++EL LE R+ IN KARLV G D ++ G ISGN MRC NCP RGC +CPMY VG NPA+ ER+ E K+ + A+ AE+
Sbjct: 87 PSQALDQLANSEQEQRDWI---DKADRKQELRSKNLTDEQIRFYLQEDSYEVSYDAEPQVDSDLATKFREITSSGDNAFGQVVDVSQIGIVDSNLLVELDEDGEPYT-ERFVYVDEHSCIGCTNCACIAKSTFMMEEEHGRARVFLQSGDSPETVEEAIDTCPVDCIHYVPWEELVALETRRQSQFINNKARLVNQQEGRGVDVASLVGGVIRRASAPDISGNRGMRCNNCPGRGCKSCPMYGVGKNPAFLEREQEKMEKRARRDAARAAED 354
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A7S1VLY3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VLY3_9STRA) HSP 1 Score: 190 bits (483), Expect = 6.300e-51 Identity = 111/250 (44.40%), Postives = 146/250 (58.40%), Query Frame = 2
Query: 818 ETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVTRAPDKTDLMLDALAEAATREQREYESYIKGLGKVPSHSMVEVDEG-GQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLVGN-DHDTIANGQQV-----------ISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAE 1528
E L A L +EV + +++ + MK +G S I + V++ L+ +EA Q +E + V SH++V++DE G+PV + V+VDE+TCIGCT+CA T+P TFFME D GRARV +Q GD TI AIETCPVDCIHYV FDEL +LE ER NINFKARLVG D+ + V ISGN RC NCP+RGC +CPM+ VG NPA+++R+ E
Sbjct: 108 EQLQA-LQAEEVEFTEKEKERANLALEMKEKGWSSSAITNTLDVAVDDT----------LEQTSEAVQSMQEAWELDPVDMATVESHTLVDMDEDTGEPVR-QQMVFVDEHTCIGCTNCAVTSPGTFFMEPDMGRARVMKQWGDDDETIQIAIETCPVDCIHYVPFDELKKLEVERRDQNINFKARLVGGGDNGGVGMAHMVGGAAKFTPAPEISGNMGSRCNNCPSRGCRDCPMFGVGKNPAFEKREKE 345
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A7S0FI65_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FI65_9STRA) HSP 1 Score: 184 bits (467), Expect = 7.400e-51 Identity = 100/189 (52.91%), Postives = 119/189 (62.96%), Query Frame = 2
Query: 1067 VPSHSMVEVDEGGQPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGININFKARLV------GNDHDTIA-----NGQQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQERKAEIEAKKLAKGLAKRAEEQGNRSVEL 1600
V SH+ VE DE + + VYVDE TCIGCT+CA A STFFM+ +HGRARVFQQ GD TI AIETCPVDCIHYV +DEL RLE ER INFKARLV G+ I +G Q ISGN RC NCP+RGC NC MY VG NP +++ K E+ ++ A+ L + N+S EL
Sbjct: 4 VESHTTVERDEDSGDLIRTQMVYVDEVTCIGCTNCAMIAQSTFFMDSEHGRARVFQQWGDDTETIAVAIETCPVDCIHYVPYDELVRLEVERRDQQINFKARLVNQGEYGGDSGHRIGGAVQFSGPQKISGNAGARCNNCPSRGCKNCLMYGVGENPEFKK-KEEMRKQRRARKLMQEKLANENKSAEL 191
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Match: A0A6V1QAL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QAL3_HETAK) HSP 1 Score: 189 bits (479), Expect = 1.950e-50 Identity = 115/257 (44.75%), Postives = 146/257 (56.81%), Query Frame = 2
Query: 770 STNFAKKAVDYGEAPQETLNAILGGDEVRDMDMARQKGSKRAAMKARGLSDEQIAAYVGDPVEEVTRAPDKTDLMLDALAEAATREQREYESYIKGLGKVP--SHSMVEVDEGG-QPVDIDRFVYVDEYTCIGCTHCAHTAPSTFFMEDDHGRARVFQQAGDPAVTIMTAIETCPVDCIHYVGFDELARLEREREGIN-INFKARLVGNDHDTIAN---GQQVISGNESMRCANCPTRGCYNCPMYSVGYNPAYQER 1519
ST A AV E E A L E D+D A + + AM RG + E + AY G V AP++ + +LD TR + + ++ + SH VEVD +P+ +RFVYVDEYTCIGCT+CA A +TFFME++ GRARVF Q GD T+ A+ETCPVDCIH+V + EL +LE ER G+ INFKARLVG D I+ G Q ISGN + RCANCPT G VG NP + E+
Sbjct: 86 STPVAAAAVPLDE---EAAIAALTKGEAEDLDKAERTERQVRAMLERGATPEAVRAYTGVDVA----APEEANALLDDFQRLTTRGRVAFGQVVEEIDYTQFLSHQHVEVDAATKEPLYQERFVYVDEYTCIGCTNCAAVAQNTFFMEEEFGRARVFLQNGDDDETVQIAVETCPVDCIHFVPWPELQKLELERAGMTEINFKARLVGGDGARISKNGGGMQNISGNNAFRCANCPTLGXXXXXXXXVGENPNFIEK 335 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20646.1 >prot_S-ischiensis_contig9.20646.1 ID=prot_S-ischiensis_contig9.20646.1|Name=mRNA_S-ischiensis_contig9.20646.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=453bp MARPRHFALGCGLWAASIGPARAFAPPATRGVLRDAGLELRERNRASFRGback to top mRNA from alignment at S-ischiensis_contig9:2254834..2261916+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20646.1 ID=mRNA_S-ischiensis_contig9.20646.1|Name=mRNA_S-ischiensis_contig9.20646.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7083bp|location=Sequence derived from alignment at S-ischiensis_contig9:2254834..2261916+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2254834..2261916+ >mRNA_S-ischiensis_contig9.20646.1 ID=mRNA_S-ischiensis_contig9.20646.1|Name=mRNA_S-ischiensis_contig9.20646.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2718bp|location=Sequence derived from alignment at S-ischiensis_contig9:2254834..2261916+ (Schizocladia ischiensis KU_0333)back to top |