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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 370 |
| Cds size | 330 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817366.1188393-UTR-S-ischiensis_contig9:1452581..1452619 | 1622817366.1188393-UTR-S-ischiensis_contig9:1452581..1452619 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1452582..1452619 - |
| 1695741060.0236144-UTR-S-ischiensis_contig9:1452581..1452619 | 1695741060.0236144-UTR-S-ischiensis_contig9:1452581..1452619 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1452582..1452619 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817366.1348698-CDS-S-ischiensis_contig9:1452619..1452736 | 1622817366.1348698-CDS-S-ischiensis_contig9:1452619..1452736 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1452620..1452736 - |
| 1695741060.037392-CDS-S-ischiensis_contig9:1452619..1452736 | 1695741060.037392-CDS-S-ischiensis_contig9:1452619..1452736 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1452620..1452736 - |
| 1622817366.1495526-CDS-S-ischiensis_contig9:1455150..1455246 | 1622817366.1495526-CDS-S-ischiensis_contig9:1455150..1455246 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1455151..1455246 - |
| 1695741060.053156-CDS-S-ischiensis_contig9:1455150..1455246 | 1695741060.053156-CDS-S-ischiensis_contig9:1455150..1455246 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1455151..1455246 - |
| 1622817366.168212-CDS-S-ischiensis_contig9:1455563..1455680 | 1622817366.168212-CDS-S-ischiensis_contig9:1455563..1455680 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1455564..1455680 - |
| 1695741060.0642405-CDS-S-ischiensis_contig9:1455563..1455680 | 1695741060.0642405-CDS-S-ischiensis_contig9:1455563..1455680 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1455564..1455680 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20567.1 >prot_S-ischiensis_contig9.20567.1 ID=prot_S-ischiensis_contig9.20567.1|Name=mRNA_S-ischiensis_contig9.20567.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=110bp
RTCSSGRSCSGRSIKCEATGKPLTAISLAKNTSKRRSGRVSALHGDFLPV
LARWAGRTSLTTAERTLTTCRMHHAGERTRMRGPSMTDSGLGPGFGPRTR
PKSTNCGHK* back to topmRNA from alignment at S-ischiensis_contig9:1452582..1455680- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20567.1 ID=mRNA_S-ischiensis_contig9.20567.1|Name=mRNA_S-ischiensis_contig9.20567.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3099bp|location=Sequence derived from alignment at S-ischiensis_contig9:1452582..1455680- (Schizocladia ischiensis KU_0333)
CGGACTTGCAGCTCCGGCCGTAGCTGCAGCGGCCGCTCGATCAAGTGCGA
GGCCACCGGGAAACCCCTGACTGCTATATCACTCGCGAAGAATACCTCCA
AGCGTAGGAGCGGCAGAGTGAGCCAAACTGGGTGCTTCCTTCCCCCCTCG
CAGCGCATTGTATTCCCCGCGGCCGTCGTCTCCCGCCCCGACGGCCCGCA
CGCGCCGCAACAAATCTAGACACCTTGTGCGTCTTTTAGGGGTTCGAAAC
CGCCCCGCGTTTGCTCATAAACTGGTGAATATGACTGGCCCTTTGCGTGG
AACAGAAGGGGGCAGCTCGGCTGCAACGAATACGTACGACTCACTGAAGC
CCGGCCGCGATCGCTCACGGTCACTCCAGAAGCTCAGCAACGGGCCCCTG
CGTCTCACCGTGCTTCTCCCCGTGCCGCGCGCAGGTTTCGGCTTTGCATG
GCGACTTTCTGCCCGTCCTTGCACGATGGGCAGGCCGGACGAGTCTGACG
ACAGCGGAGAGGACTCTGACTACGTGCCGGGTGAGGTGATCGTTTCGATT
AGAAACCCGCGGCATGTATATACATGTACTCATTGGCTTGTCTTGCGACA
TAACTTTGCGTGCAATGCCGACAGCCCTAAGTCAAAACTTCGTGTTTGCC
CTCCGACAGGAGTAGCTATTTATCCATGGACTCTCGCATCCCAACTAGGC
CGGGACGGAGCATTAGGCCGGGAGATGACGATCATCGTTTCAAGTACATT
AGAAACCCGCGGCATGTGCATCACTTTAGCCGGTTAAACCCCGCTTGCCT
TATCAGAGGCTCTACCTGGGGCCCGTTGCCGAGCTTCTGGAGTGGCCGCG
AGCGATCGCGGCCGGGCTTCAGTGAGTCGTATGTACTCGTTGCAACCGAG
CTGCCCCCTTCTGTTCCACGCAAAGGGTCAGTCATATACGCCAGTTTATG
AGCAAACGCGGGGCGGTTTCCAACCCCTAAAGACGCACACTGCCTGAGAG
GTATGTCGTGGTTGATTCAGCGGGTTGCTGCTGCGTACTGCAACTGCAGT
TAGTGAGGCAGGCCACGCTGGGGTGCCAGTGTGCCTGTGCTGTATTGATC
AGTGATGGAATACCTAAGCAAATCCACCTATTTATCGACAGTACTGATTT
TGAATTATTTGGATGGCAAGCGAGTCCGGGCCCCGTCCCAACAACCTAAG
ATGGGGGCCTCACCAGAAGCCCTTCGCACCCGCAGGGCACAAAAATATAA
AACCACTAAGGGGGCAATGCACGGGCAATACAGGGGCAATGTAGGGGGAT
CTCTCTCGTGCCGCGTTGCGGGACGTACCTGTAAGAGCGCGCAGACCTTG
AAGTTGCAGACGACGGAAGAAACCATCAGCCAGTGCGACGGCGATTGCCG
CACACTAGCAACATGGCCAAGAGGGAATACTAGCACTAAGCAACCATGGC
ACAATGATCGGTGCACCCACCAGCGACCAAACAGAAACCACGACCACTAT
CTGACCTATATGTCGATCGATAGTCGATATTCAATAGTTTGACCCACGCT
AAATCCAAGTAGTCAGTAACGTCACCCACAAAATCAGTCGAGCCCGACAA
CTGTGAACCTGCTTAGCCTACTTAGCTTGACAGAATCCCAAACGCCCCAC
CCATCATGCGACACTTCAAAGTATGACGTGTTTATTCAGGAGAATGCTTT
GCCATGCCGTCCCGGTTCACTCTTGCGTGTTGCAATGGAGACAGGCCGTT
TCCCCATGTCTGCGCGGGCAGAACGCATCACCGAAGCAGTACTCGTACAG
ACGCCTGAACAGCGTCGCTGGACACACGTGGCCAGAGCAGGGCCCACGCG
GAAGCTTTCCCTCCTTAACCCTTGTACCCTGGGGCCCGTATAGTCATGGG
GTTTTGTGTAAGTCCAATGTACCAGAGGTAAAAGGGTTACGAGCTCACTT
GATTTCAGGACGTGGTACAGCAGTCTTTCCGCGGGGCTCGTCGCAGCTCC
CGCCTTCAAGAGACCAGTGATGTGATATCGATCAGTAGATAGTTGTCGGG
CTCGACTGAGTTTGTGGGTGGCGTTACTAAGTAACTACTTGGATGTAGTG
TGGGTCAAACTATCGAATATCGACTATCGATATCTACCAGTCAAATAGAT
CAGTACTGTCGATAAATGGGTTGATTGCTTAGATATTCCATCACTGGCCC
TAGCCAGCTTTCCCGACAACGACGCAACTGCTCCGTTTTGCAGGGCCTCC
CCCGCAGTTGCTTGCGGTGTGACGGGGTGTGATTCAGATAAATTGTAACG
AGGTACAATCGCATGTGTGTGCGATTGACTGTTGTGTGACGGGGTGCTTT
TATGTGATGTCGAGCTACAGCACAGCACCTCAGATGGGGTATCTCCCGTT
CGAACAAGCTAACTGTCATACTTACACCTATGGCTCTGCCGGGGGAGGGA
GGGGTCCTGCTCCGTCTCGACCGGGGCGCATGGTCAATGGTCTCGGGACT
ACGGCAAGCACAACGTGAGTACATATATGTCAGAACCGCGGGGGCGCCAT
TTGACTAACCCGCACAGGTTAGTCAAACGGCGTTCCCCGCTGTCCTGACA
ACATATATATGGCAGGCGCCTCATGAGTACCTACCCCCCCGCCGCCCACG
CACAACCGCGCGCATGTCGTGGCCGTGGGCTTTTTCGCAACGCCGCGCTG
CTCGCCTCTGCACGCAGATGCAGTGATGGAATATCTAAGCAAATCGACCT
TTTTATCGACAACACCGATCTATATATCTATCGATAGTCGATGTTCGATA
CTTTTACCCGCACTATATCCAAGTACTCCCGGAAGCAGTTAGTAATGTCA
CCCACAAAATCAGTCGAGCCCGACAACTATCTACTGATCGATAGAACATC
ACTGCGGGCGTTCGCACCGCCGCGCTGCTCGCCTACGCACGCAGATGCAC
CACGCAGGGGAGAGGACGAGGATGAGGGGCCCGTCGATGACGGACAGCGG
GTTGGGCCCGGGATTCGGCCCCAGAACAAGGCCAAAGTCGACGAATTGTG
GGCACAAATGAACTCCACGTCACCACCAAACGGGGCCGCCGGCGGGGGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:1452582..1455680- >mRNA_S-ischiensis_contig9.20567.1 ID=mRNA_S-ischiensis_contig9.20567.1|Name=mRNA_S-ischiensis_contig9.20567.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=660bp|location=Sequence derived from alignment at S-ischiensis_contig9:1452582..1455680- (Schizocladia ischiensis KU_0333)
CGGACTTGCAGCTCCGGCCGTAGCTGCAGCGGCCGCTCGATCAAGTGCGA
GGCCACCGGGAAACCCCTGACTGCTATATCACTCGCGAAGAATACCTCCA
AGCGTAGGAGCGGCAGACGGACTTGCAGCTCCGGCCGTAGCTGCAGCGGC
CGCTCGATCAAGTGCGAGGCCACCGGGAAACCCCTGACTGCTATATCACT
CGCGAAGAATACCTCCAAGCGTAGGAGCGGCAGAGTTTCGGCTTTGCATG
GCGACTTTCTGCCCGTCCTTGCACGATGGGCAGGCCGGACGAGTCTGACG
ACAGCGGAGAGGACTCTGACTACGTGCCGGGTTTCGGCTTTGCATGGCGA
CTTTCTGCCCGTCCTTGCACGATGGGCAGGCCGGACGAGTCTGACGACAG
CGGAGAGGACTCTGACTACGTGCCGGATGCACCACGCAGGGGAGAGGACG
AGGATGAGGGGCCCGTCGATGACGGACAGCGGGTTGGGCCCGGGATTCGG
CCCCAGAACAAGGCCAAAGTCGACGAATTGTGGGCACAAATGAATGCACC
ACGCAGGGGAGAGGACGAGGATGAGGGGCCCGTCGATGACGGACAGCGGG
TTGGGCCCGGGATTCGGCCCCAGAACAAGGCCAAAGTCGACGAATTGTGG
GCACAAATGA back to top
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