mRNA_S-ischiensis_contig9.20553.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: D8LSN2_ECTSI (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN2_ECTSI) HSP 1 Score: 313 bits (801), Expect = 4.990e-89 Identity = 231/481 (48.02%), Postives = 285/481 (59.25%), Query Frame = 2
Query: 572 LLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLI-----CFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAGGVRPADVSWALGQCDHHLREALSWLDGLCSDQILDPYLDGAARALEVLMAKMHRQANFGPGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFARIAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXX--RSLLTE---------PCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWLIGGAAAGE 1966
LL+ALGPLRDL+L RSLERLTTPVEQMFPQ DGY AAVPSKHDLAS R +HAE+S +P + D +L P+LL+GV + RL C+KVEAM S ++ A+TFGG + AA XXXXXXXXXXXXXX P W PT EQEHNLQLL LV++LREALLG+PA + PA ++ + +C + +A+ LD L S L+PYL G ARA +KMHR+ NFGPG+ XXX SLFL E+Q AL AL +HF RIAALR+P +++LR LA R+LR++V+H AL+RPLSE GK R+AQDMATLEIALSPLA+VSELG Y E+RAFRTLLFVD XXXXXX R T+ P G+ R + W + +++ H SRG S+ +V WL+GG AA E
Sbjct: 637 LLEALGPLRDLFLARSLERLTTPVEQMFPQFDGYMAAVPSKHDLASFFRSIHAELSLAVPAGSVGSAAATGSXXXXXXXXXXXXXXXXXSLEADFSLLPILLKGVVQAARLFCTKVEAMQSVEKGAYTFGGGSNAALGXXXXXXXXXXXXXXXXXXXXXXXXXXAPMEA-------WAPTLEQEHNLQLLELVVKLREALLGIPALVLPSPPTPAAAAYGV-ECRERVAKAVRALDDLASRVFLEPYLSGVARAXXXXXSKMHRE-NFGPGVSA---MAASEHXXXXXXSLFLHELQRALAALQADHFTRIAALRTPSAEAALRSLAARVLRAYVTHCALIRPLSEGGKARMAQDMATLEIALSPLARVSELGAVYLESRAFRTLLFVDDADDEGGDSNNQXXXXXXRGRGRDSRGFRGQKTDVTVYRSGAAPEHGRERRTRCWPSTQADGHERMAV-HKSRGMSQQAYVTWLLGGGAAEE 1104
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: A0A836CDX3_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX3_9STRA) HSP 1 Score: 202 bits (514), Expect = 8.130e-56 Identity = 142/378 (37.57%), Postives = 193/378 (51.06%), Query Frame = 2
Query: 572 LLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAG-----GVRPADVSWALGQCDHHLREALSWLDGLCSDQILDPYLDGAARALEVLMAKMHRQANFGPGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFARIAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEE 1690
+L AL P+RD YL SL RLT PVEQMF DGY AAVPSKHDLAS V+ + AE + + D A G G ++LAPL++RG K V+L CSKV +L AS V A W T +Q HN+QLL L+ +LR A++ LP+ + G G+ P +V+ + H+ AL +D L + QIL PYL AA ALE +M MH+ + L+GG S ++ ++Q A+ + EH +AAL +P Q LR L +RL+RSFVSHAAL+RP+ EAGK+++A+DMA LE+ LS +A V+ LG +Y E
Sbjct: 1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAA-------VATD---------------AVG--GHVSLAPLVMRGAAKAVKLFCSKVSRLL----------------------------------------------ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSF--ANLEGGSAEQT------SGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAE 300
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: A0A7S2B2D8_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D8_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.160e-50 Identity = 160/488 (32.79%), Postives = 222/488 (45.49%), Query Frame = 2
Query: 560 EREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAGG-VRPADVSWALGQCDHHLREALSWLDGLCSDQILDPYLDGAARALEVLMAKMHRQANFGPGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFARIAA-LRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWLIGGAA---------AGEWNTRPEAS 1990
++E LL AL P+R ++ +SLE L PVEQMFP V+GY+ A+PSKHD+ SL+R+V AE+++ +L+L PL+LR + K VR L +KVE M+ T +A +G K T T EQ+HN+QLL ++ L L G+ + G V P + + + + + A+S L+ L QIL P + G A LE +AK+H NFG G S FL + AL L EH +R+ + V SLR LA RL RSFVS+ AL+RPLSEAG++RLA+DMA E+ LS + LG ++EE RA R LLF+ +L+ LRPST ++ +S AP L+SPH S+ +V WL+ G A AGE EAS
Sbjct: 97 QQEQLLSALVPMRQRFMAKSLEALMRPVEQMFPNVEGYSNAIPSKHDVQSLMRIVDAELARATD----------------------------ELSLMPLILRNLVKAVRFLSTKVEGMVYTSTSALVYGDK------------------------------------------MTSQLTVEQDHNMQLLEFIVNLTSQLKGIVGAVLKGANVEPQEGD--MKRFELCISPAVSALESLAKHQILRPAMSGMATTLEKHLAKVHDD-NFGEG--------QPSEVPEDGTSKFLSDFDAALQVLRREHLSRLPRDTTTGVVGESLRDLARRLARSFVSNIALVRPLSEAGRLRLARDMAAFEMYLSSFYNLKGLGRSHEELRALRQLLFLGEEGHTPTAA------------------DVLSHDLCRSLRPSTALNHCYSTAPQTLTSPHGQCKVSQRAYVEWLVAGTALKSLVVKYPAGEGGAAREAS 485
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: W7U1N2_9STRA (Conserved oligomeric Golgi complex subunit 5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N2_9STRA) HSP 1 Score: 181 bits (458), Expect = 9.580e-44 Identity = 159/465 (34.19%), Postives = 212/465 (45.59%), Query Frame = 2
Query: 557 DEREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAGGVRPADVSWALG-QCDHHLREALSWLDGLCSDQILDPYLDGAARALEVLMAKMHRQANFGPGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFARIAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPL-AKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWLI 1945
+ER +AL LRDLYLG+SL+RL P+EQMFP +GY AA+PSKHDL +L+RV+ EV V+A G L P +L+G+ K V L C+K+EAM++T E A L P R W+ E+EHNLQLL LV L L LP L PA + +G C + EA+ L+ L ++ PY+ A L +A+MH + N+ P S F+ Q A+ AL H +R L+ V + + LA RLLR +VSHAAL+RPL+EAGK ++ DMA LE AL L K++ELG Y E +AFR L F + LL E LRPST+ LF+RAP +LSSPH+ + S V L+
Sbjct: 610 EERTVGAEALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEV--------------------------VSALAEGGPLLLPHVLQGMVKAVYLFCAKIEAMINTGEGARK------------LYPLRG------------------------------WMLGYEKEHNLQLLQLVALLHHGLQRLPQELA-----PA---FRVGVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLE-NYAPL----PQEQEQGDKGQTMNSRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLELKAFRELCFFGDEQNPLTV------------------KGLLKERFTANLRPSTLLDALFARAPLELSSPHILQRCSARTLVEELL 974
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: A0A8K1C6A0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A0_PYTOL) HSP 1 Score: 160 bits (405), Expect = 3.310e-37 Identity = 134/476 (28.15%), Postives = 200/476 (42.02%), Query Frame = 2
Query: 554 ADEREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAGGVRPADVSWALGQCDHHLREALSWLD----GLCSDQI-------LDPYLDGAARALEVLMAKMHRQ--ANFGPGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFARIAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWL 1942
A ER LL A+ PL D ++ R R+ +P+E MFPQ + + PS+ D+ +L R + AE+ L+ D +L + + + K V L C+ + +L+T +AA VA T+ T Q HN+ LL+ + +L + + L ARL + A S L L++ + L C +QI L PYL A LE + AKMH + A+ D GS ++ E + EH R+ ++ PCV +S+ RL+ F+ HAAL+RPL E GK+RLA DMA LE+ L + + LG Y+E RAFR L+F++ S+L + + K+RPS VWH+L SRAP +L PH + WS ++V WL
Sbjct: 449 AAERNQLLDAMTPLADAFIERCYRRIASPIELMFPQSANFHTSPPSRSDMQTLARTIFAEME------LVGHDAVL----------------------IERVSQQIHKAVHLFCTTSKKILNTGKAA--------------------------------------------VALMPTYGRTANQAHNIALLSALYQLDDMITQLEARLGSTARGNAQTSTKLVPSSTQLQKQIKALQEKEFAPCHEQIQELQYTILGPYLQALAGVLESIFAKMHDESFADQTTSRDARGANAPIPATNPTGGSRYMSEFSSVFNVIIEEHIRRMPSV--PCVTTSVSAFIARLMSVFIRHAALVRPLEENGKLRLANDMAQLELRLESVLPLRSLGAPYDELRAFRHLIFLES-------------------------HSILRDSMVDKIRPSNVWHHLISRAPLELQLPHHMKRWSAARYVEWL 825
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: I2CR59_NANGC (Conserved oligomeric Golgi complex subunit 5 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR59_NANGC) HSP 1 Score: 151 bits (382), Expect = 3.980e-37 Identity = 133/380 (35.00%), Postives = 178/380 (46.84%), Query Frame = 2
Query: 557 DEREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAGGVRPADVSWALG-QCDHHLREALSWLDGLCSDQILDPYLDGAARALEVLMAKMHRQANFGPGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFARIAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPL-AKVSELGPAYEE 1690
+ER +AL LRDLYLG+SL+RL P+EQMFP +GY AA+PSKHDL +L+RV+ EV V+A G L P +L+G+ K V L C+K+EAM++T E A L P R W+ E+EHNLQLL LV L L LP L PA + +G C + EA+ L+ L ++ PY+ A L +A+MH + N+ P S F+ Q A+ AL H +R L+ V + + LA RLLR +VSHAAL+RPL+EAGK ++ DMA LE AL L K++ELG Y E
Sbjct: 22 EERTVGAEALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEV--------------------------VSALAEGGPLLLPHVLQGMVKAVYLFCAKIEAMINTGEGARK------------LYPLRG------------------------------WMLGYEKEHNLQLLQLVALLHHGLQRLPQELA-----PA---FRVGVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLK-NYAPL----PQEQEQGDKGQTMNSRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLE 319
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: A0A484EC71_BRELC (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EC71_BRELC) HSP 1 Score: 147 bits (372), Expect = 4.300e-33 Identity = 131/479 (27.35%), Postives = 195/479 (40.71%), Query Frame = 2
Query: 560 EREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAGGVRPADVSWALGQCDHHLREALSWLDGLCSDQI-------LDPYLDGAARALEVLMAKMHRQANFGPGLDGGXXXXXXXXXXXKA---------GSLFLEEVQGALVALHPEHFARI--AALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWL 1942
ER LL A+ PL + Y+ R+ R+ P++ MFPQ Y A+ PS+ D+ +L + + AE+ AG G L +L+ V K V C V+ M+ +AA T PL + TP Q HN+ L + L + + + + ++ + D L C ++I L YL A LE + AKMH ++ FG G D ++ GS +++EV + EH R+ AAL PC+ + ERL+ +FV HAALLRPL+E GK+RLA DM LE+ L + + + G YEE RAFR +LF++ +L + + K+RPS VWH+L SRAPA+L PH R W+ +++ WL
Sbjct: 447 ERTQLLNAMSPLYEAYIDRAYNRIMHPIQLMFPQSSNYHASPPSRSDMQTLSQTIFAELEH--------------------------AGHDGVLLEG--MLQQVQKAVTRFCDNVQKMIHHGKAAAT-----------PL---------------------------------LNFGRTPSQAHNVGLFNALSLLHDTIKAIETYIATATSSAENLDVSTATVDVKASSTTKLLS--CQERIENLQYALLGSYLQTLAGLLEPIFAKMHNES-FGLGTDALKEASVKETIQSRSNVQTAQGTRGSKYMQEVSHVFAVILDEHLRRLPKAALVMPCLVDFV----ERLMSTFVRHAALLRPLTERGKLRLANDMTQLELRLEQVVPLRKNGAPYEELRAFRHMLFLEN-------------------------HEILRDATIDKIRPSNVWHHLISRAPAELQLPHRLRNWTATKYIEWL 821
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: A0A0W8DBL2_PHYNI (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DBL2_PHYNI) HSP 1 Score: 139 bits (350), Expect = 1.050e-30 Identity = 135/515 (26.21%), Postives = 213/515 (41.36%), Query Frame = 2
Query: 560 EREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAG----GVRPADVSWALGQCDHHLREALSWLDG--LCSDQI--------------LDPYLDGAARALEVLMAKMHRQANFGP-------GLDGGXXXXXXXXXXXK--AGSLFLEEVQGALVALHPEHFAR--IAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWLIGGAAAGEWN----TRPEASGGS 1999
ER LL ++ PL D ++ R+ R++ P++ MFPQ + A+ P + D+ +L R + +E+ AG DL L L+ V K V L CS V+ ++ +AA A+ +++ TP Q HN+ L+ ++ L +A+ + R+ G + + D +S + LC+ + L YL A LE + AKMH ++ FG GG + +GS +++E A + EH R IA + C+ + ERL+ F+ HA+LLRPL+E GK+RLA DMA LE+ L + + +G AYEE RAFR ++F+D +L + + K+RPS VWH+L SRAP +L PH + W+ +++ WL AA G+ + T P +SG S
Sbjct: 183 ERTQLLDSMAPLYDAFIDRAYRRMSNPIQLMFPQSSNFHASPPGRSDMQTLSRTIFSELEH--------------------------AGQ--DLVLLDGTLQQVRKAVNLFCSNVKRIMHQGKAA--------------------------------------------AATMSSFGRTPAQAHNVGLMNVLSLLDDAVEEVMNRIETAAAPNGTQTGTSTHMSSAADPVATGVMSSKEAKELCTKNLSPCREMIGDLKYALLGFYLQALAVLLESIFAKMHDES-FGDQSATARVATSGGAPRSSGGGRSSQGTSGSKYMQEFSNAFTIILEEHLRRLPIAVFATKCLADFV----ERLISVFIRHASLLRPLTENGKLRLANDMAQLELRLEHIVPLRNIGAAYEELRAFRHMIFLDNS-------------------------EILRDTTIDKIRPSNVWHHLTSRAPPELQLPHQMKHWTASKYIEWLDTRAAIGQSSSPSTTPPPSSGKS 595
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: W2RIL0_PHYPN (Conserved oligomeric Golgi complex subunit 5 n=16 Tax=Phytophthora TaxID=4783 RepID=W2RIL0_PHYPN) HSP 1 Score: 139 bits (350), Expect = 2.350e-30 Identity = 135/515 (26.21%), Postives = 213/515 (41.36%), Query Frame = 2
Query: 560 EREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREALLGLPARLTAG----GVRPADVSWALGQCDHHLREALSWLDG--LCSDQI--------------LDPYLDGAARALEVLMAKMHRQANFGP-------GLDGGXXXXXXXXXXXK--AGSLFLEEVQGALVALHPEHFAR--IAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWLIGGAAAGEWN----TRPEASGGS 1999
ER LL ++ PL D ++ R+ R++ P++ MFPQ + A+ P + D+ +L R + +E+ AG DL L L+ V K V L CS V+ ++ +AA A+ +++ TP Q HN+ L+ ++ L +A+ + R+ G + + D +S + LC+ + L YL A LE + AKMH ++ FG GG + +GS +++E A + EH R IA + C+ + ERL+ F+ HA+LLRPL+E GK+RLA DMA LE+ L + + +G AYEE RAFR ++F+D +L + + K+RPS VWH+L SRAP +L PH + W+ +++ WL AA G+ + T P +SG S
Sbjct: 466 ERTQLLDSMAPLYDAFIDRAYRRMSNPIQLMFPQSSNFHASPPGRSDMQTLSRTIFSELEH--------------------------AGQ--DLVLLDGTLQQVRKAVNLFCSNVKRIMHQGKAA--------------------------------------------AATMSSFGRTPAQAHNVGLMNVLSLLDDAVEEVMNRIETAAAPNGTQTGTSTHMSSAADPVATGVMSSKEAKELCTKNLSPCREMIGDLKYALLGFYLQALAVLLESIFAKMHDES-FGDQSATARVATSGGAPRSSGGGRSSQGTSGSKYMQEFSNAFTIILEEHLRRLPIAVFATKCLADFV----ERLISVFIRHASLLRPLTENGKLRLANDMAQLELRLEHIVPLRNIGTAYEELRAFRHMIFLDNS-------------------------EILRDTTIDKIRPSNVWHHLTSRAPPELQLPHQMKHWTASKYIEWLDTRAAIGQSSSPSTTPPPSSGKS 878
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Match: G4Z3A8_PHYSP (Conserved oligomeric Golgi complex subunit 5 n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z3A8_PHYSP) HSP 1 Score: 138 bits (348), Expect = 3.850e-30 Identity = 140/517 (27.08%), Postives = 214/517 (41.39%), Query Frame = 2
Query: 554 ADEREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHDLASLVRVVHAEVSKGLPLFLICFDNLLECPPPSPLQMAVAAGPRGDLTLAPLLLRGVGKTVRLLCSKVEAMLSTDEAAFTFGGKALAAATGPLSPRRDAGGGXXXXXXXXXXXXXXGPASVLVASAATWVPTPEQEHNLQLLALVIRLREAL--LGLPARLTAGGVRPADVSWALGQCDHHLREALSWLDG--LCSDQI--------------LDPYLDGAARALEVLMAKMH-----------RQANFG--PGLDGGXXXXXXXXXXXKAGSLFLEEVQGALVALHPEHFAR--IAALRSPCVQSSLRLLAERLLRSFVSHAALLRPLSEAGKVRLAQDMATLEIALSPLAKVSELGPAYEEARAFRTLLFVDXXXXXXXXXXXXXXXXXXXXXXXXXXRSLLTEPCMGKLRPSTVWHYLFSRAPAQLSSPHVSRGWSELQHVRWLIGGAAAGEWN----TRPEASG 1993
A +R LL ++ PL D ++ R+ R++ P++ MFPQ + A+ P + D+ +L R + +E+ + AG D L L+ V K V L C+ V+ ++ +AA AAT P R TP Q HN+ L+ ++ L +AL +G +A G + S D ++ + LCS + L YL A LE + AKMH R AN G P GG +GS +++E A + EH R IA+ + C+ + ERL+ F+ HA+L+RPL+E GK+RLA DMA LE+ L + + +G YEE RAFR ++F+D +L + + K+RPS VWH+L SRAP +L PH + W+ +++ WL AA G+ + T P +SG
Sbjct: 415 AADRTQLLDSMAPLYDAFIDRAYRRMSNPIQLMFPQSSNFHASPPGRSDMQTLSRTIFSELEQ--------------------------AGQ--DPVLLDGALQQVRKAVNLFCTNVKRIMHQGKAA---------AATLPSFGR-----------------------------------TPAQAHNVGLMNVLSMLNDALEEVGNRIETSATGNQTGAASAVSSATDSITNGVVTLKEAKMLCSRNLAPCREMITELEYALLGFYLQALAVLLEGIFAKMHDESFGDQSGVARVANSGGAPRSTGGLRSSQGT-----SGSKYMQEFSNAFAVVLEEHLRRLPIASFATKCLAEFV----ERLISVFIRHASLVRPLTENGKLRLANDMAQLELRLENIVPLRNVGAPYEELRAFRHMIFLDNS-------------------------EILRDTTIDKIRPSNVWHHLTSRAPPELQLPHQMKHWTASKYIEWLDTRAAIGQSSSPSSTPPPSSG 825 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20553.1 >prot_S-ischiensis_contig9.20553.1 ID=prot_S-ischiensis_contig9.20553.1|Name=mRNA_S-ischiensis_contig9.20553.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=534bp MGADEREGLLKALGPLRDLYLGRSLERLTTPVEQMFPQVDGYTAAVPSKHback to top mRNA from alignment at S-ischiensis_contig9:1345166..1356410- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20553.1 ID=mRNA_S-ischiensis_contig9.20553.1|Name=mRNA_S-ischiensis_contig9.20553.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11245bp|location=Sequence derived from alignment at S-ischiensis_contig9:1345166..1356410- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:1345166..1356410- >mRNA_S-ischiensis_contig9.20553.1 ID=mRNA_S-ischiensis_contig9.20553.1|Name=mRNA_S-ischiensis_contig9.20553.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3204bp|location=Sequence derived from alignment at S-ischiensis_contig9:1345166..1356410- (Schizocladia ischiensis KU_0333)back to top |