|
|
Homology
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: A0A6H5KQH0_9PHAE (Pep3_Vps18 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH0_9PHAE) HSP 1 Score: 315 bits (808), Expect = 3.640e-90 Identity = 195/341 (57.18%), Postives = 234/341 (68.62%), Query Frame = 3
Query: 1056 VSVAALYFEAASSAVHGDSRVFVIAATANPTRLYTFAGGPTLEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAG----------RPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYP-AAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSL---DAQWGHVLALAADPFKGAG-------------HLWLFTDRTPVQVLVSNEGRDVWSLYLERALEGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
V VAALY E+ SSAVHG++RVFV+A TA+P RLY F GGPTLEVMFRE+RESG+ SF+ELPG M++TEL + K++ G G XXXXXXXX AG + E P +FALLTSMG+YHGSL+ G T +V+ E +L+PYP AA A XXXXXX P SMA+TE+H LLL+ G+LQVVSRLNGAVVQE+SL D GHVL L DP+ G G LWLFTDR P ++ VS+E R+VW L+LE+A+ GEE HF AA+HCK+ ERAQV+YVQAGWYF++GQ T AARYYAKTPC FEEIALKFM
Sbjct: 386 VFVAALYLESMSSAVHGETRVFVMAVTASPLRLYLFMGGPTLEVMFREHRESGTNSFRELPGNMLSTELHVY--RKSLGAAG-GAKKGLDREEGSGXXXXXXXXAAGHLSGRGGVKRQKEVPHSFALLTSMGIYHGSLALGNDATPGNVISEAQLVPYPEAAEAGDSGXXXXXXTIARSSSPLSMAMTEFHFLLLFTGRLQVVSRLNGAVVQEESLETHDPTMGHVLTLLTDPYTGGGAMQGAAPGIGVANRLWLFTDRLPFKLRVSHEERNVWMLFLEKAVAGEEAHFEDAAQHCKNAVERAQVHYVQAGWYFRRGQHTVAARYYAKTPCCFEEIALKFM 723
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: D8LI29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI29_ECTSI) HSP 1 Score: 302 bits (774), Expect = 4.000e-87 Identity = 196/332 (59.04%), Postives = 230/332 (69.28%), Query Frame = 3
Query: 1089 SSAVHGDSRVFVIAATANPTRLYTFAGGPTLEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAG----------RPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXX---HVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSL---DAQWGHVLALAADPFKGAG-------------HLWLFTDRTPVQVLVSNEGRDVWSLYLERALEGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
SSAVHG++RVFV+A TA+P RLY F GGPTLEVMFRE+RESG+ SF+ELPG M++TEL + G XXXXXXXXXXXXXX AG E P +FALLTSMG+YHGSL+ G T +V+ E +L+PYP A XXXXXXXXXXX P SMA+TE+H LLL+ G+LQVVSRLNGAVVQE+SL D GHVL L DP+ G G LWLFTDR P ++ VS+E RDVW L+LE+A+ GEE HF AA+HCK+ ERAQV+YVQAGWYF++GQ T AARYYAKTPC FEEIALKFM
Sbjct: 2 SSAVHGETRVFVMAGTASPLRLYLFMGGPTLEVMFREHRESGTNSFRELPGNMLSTELHVYRKSLGAAGGAKKGLDKEDXXXXXXXXXXXXXXXAGPLSGRGGVRRHKEVPHSFALLTSMGIYHGSLALGNDATPGNVISEAQLVPYPEAAEAGEXXXXXXXXXXXVARSSSPLSMAMTEFHFLLLFTGRLQVVSRLNGAVVQEESLETHDPTMGHVLTLLTDPYTGGGAMQGAAPGIGVANRLWLFTDRLPFKLRVSHEERDVWMLFLEKAVAGEEAHFEDAAQHCKNAVERAQVHYVQAGWYFRRGQHTVAARYYAKTPCCFEEIALKFM 333
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: D8LI30_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI30_ECTSI) HSP 1 Score: 166 bits (420), Expect = 8.180e-44 Identity = 79/126 (62.70%), Postives = 102/126 (80.95%), Query Frame = 2
Query: 578 MGTSDCRVIRWDLDR---GSEPEEIEVSRRPEDSIHKLFLDPTGSHLLVCLHAGETYYVHSSSSRPKRLPRWSGVVVEAVAFDRQRGTDSATRSILVGARTGEIYEAALEATGKDRFFNLVYHLGR 946
M TSDC +IRW+ GSE EIE+S+R ED+IHKLFLDPTG+HLL CLH GETYY+HS+++RPKRL +WSGVVVEAVAFD QR T+ +T+ I+VG R+G++YE++LE+ GK+R F LV+ L R
Sbjct: 1 MATSDCCIIRWNASTPHGGSE--EIEISKRQEDTIHKLFLDPTGNHLLACLHGGETYYLHSATTRPKRLLKWSGVVVEAVAFDSQRCTEGSTKGIVVGTRSGDLYESSLESNGKERPFGLVFSLSR 124
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.260e-40 Identity = 140/372 (37.63%), Postives = 179/372 (48.12%), Query Frame = 3
Query: 1059 SVAALYFEAASSAVHG-DSRVFVIAATANPTRLYTFAGGPTLEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSV-----------------VGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAA----------------------DPFKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERALEGEERH---------------FATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFMGDSG 2009
+V++L E++ +VHG D ++ V+AATA PTRLYTF+GGPTLE +FR YRE+ S SFQELPG + +L+ L+ XXXXXXXXXXXX PA ++FA+L + GVYHG ++ G A V +V+LLP P A P S+A T +H LLLY +L VS+L G V++ DA GH LALA A LWLFTDR+ + V EGR VW +LERAL G F A RH E A V QA W F++G+L AAR YA T FEE+AL F+ +G
Sbjct: 233 AVSSLLLESSPFSVHGRDPQLLVLAATAAPTRLYTFSGGPTLEALFRAYREASSMSFQELPGSVQTAQLQGLWAAP-----AXXXXXXXXXXXXXXXHKSGAATPATAVPELQSFAMLVADGVYHGRITRGADTAAAGXXXXXXXXAPSTDAAAFGVTDVQLLPLPGAGGA---------------APMSLAATPHHFLLLYGDRLVAVSKLTGRAVEDLPTDAHLGHPLALAGALRXXXXXXXXXXXXXXXXXXXXXXXXASGLWLFTDRSALHVAARREGRGVWRAHLERALRGSSSSAQGVXXXXXXXDRGAFELAIRHAPGPAEEAHVRCEQANWAFREGRLMEAARGYALTDAPFEEVALNFVEAAG 584
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: A0A5D6XVF9_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF9_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.680e-36 Identity = 106/320 (33.12%), Postives = 160/320 (50.00%), Query Frame = 3
Query: 1059 SVAALYFEAASSAVHGDSRVFVIAATAN----PTRLYTFAGGPT-LEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAADPFKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERALE--GEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
++A L FE +A GD R +V+ T+ PTR++ F GG E +F ++ + FQELPG + N +LR ++ R + F +LT GV+HG L FG T D+ + LL + P ++A+T+YHV+LLY +QVVS+L+G VV ++ LDA+ G V LA DP +W+ +DR ++V++++E R+VW L+L +A+ G++R F A C+ ER V+ QA YF +G+ RAA YAKT FEE+ALKF+
Sbjct: 228 AIAGLEFERWQTAA-GDPRSYVMLTTSGAGKRPTRMFQFLGGAQGFEALFGQHSSADKLRFQELPGDIPNADLRFFARQERERA--------------------------------KCFGILTGEGVFHGDLVFGSASTVDNTITGSDLLAFHGKSESSTGAGGSTRPWAP---PLALAVTQYHVILLYARSVQVVSKLSGVVVLDEPLDARVGTVHGLAHDPTGNT--VWVHSDRRILEVVIADEDRNVWKLFLNKAVASAGDDRDFEHALSVCRSAAERQHVFTAQADKYFDRGEFDRAAVVYAKTNRSFEEVALKFL 509
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: A0A8K1FLW4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLW4_PYTOL) HSP 1 Score: 157 bits (396), Expect = 6.140e-36 Identity = 97/304 (31.91%), Postives = 156/304 (51.32%), Query Frame = 3
Query: 1104 GDSRVFVIAATAN----PTRLYTFAGGPTLEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAADPFKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERAL--EGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
G+ R +V+ T+ PTR++ F G + E +F++Y E FQE+PG + N +L+ ++ R + F LLTS GV +G LSFG + T D++ +L YP P ++A+T+YHV+LL+P LQV+S+LN VV E+ D++ G+V ++ DP + +W+ +DR ++V++++E R+VW LYL++A+ G++R F A C++ ER V QA F + + RAA YAKT FEE+AL+F+
Sbjct: 236 GEMRYYVMLTTSGSGKRPTRMFQFIGTESFEPLFQQYMEQDKLRFQEIPGDIPNADLQFYAKQERERA--------------------------------KCFGLLTSEGVLYGDLSFGSKSTVDNITTGPYMLAYPGKPEGSSRSWAP---------PIALAVTQYHVILLFPRFLQVISKLNNVVVLEEQFDSRVGNVHGISVDPTYNS--VWVHSDRRILEVVIADEDRNVWKLYLQKAIAGSGDDRDFEHALSVCRNGWERQHVLTAQADKLFDKEEYDRAAVIYAKTNRSFEEVALRFL 496
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: A0A3M6V9P5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9P5_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.360e-36 Identity = 107/307 (34.85%), Postives = 153/307 (49.84%), Query Frame = 3
Query: 1104 GDSRVFVIAATA----NPTRLYTFAGGPT--LEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAADP-FKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERAL--EGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
GD R FV+ T+ PTRL+ F GG LE MF+EY FQELPG + EL+ ++ R G F +LT GVYHG FG T D+V +L YP P SMA+T+YHV+LL+ +QVVS+LNG VV E+S D++ G + ++ D FK +W+ ++R ++V++++E R+VW L+L +A+ G++R F A C++ ER +V QA F +G+ RAA YAKT FEE+ALKF+
Sbjct: 254 GDLRYFVMLTTSASGKRPTRLFQFIGGGPGGLEAMFKEYTSPEKLRFQELPGDISTAELQFYAKQERERAKG--------------------------------FGVLTGEGVYHGEFVFGLSSTMDNVTTSTGMLAYPNKPEKSSGSRGSWTP------PISMAVTQYHVILLFARHIQVVSKLNGVVVMEESFDSRVGTMHSITVDDTFKT---VWIHSNRRILEVVITDEDRNVWKLFLSKAVTGNGDDRGFEQALSVCRNGWERQRVLTAQADTLFDKGEFDRAAVIYAKTTRSFEEVALKFL 519
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: W2PDC3_PHYPN (Pep3_Vps18 domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PDC3_PHYPN) HSP 1 Score: 155 bits (391), Expect = 2.440e-35 Identity = 104/306 (33.99%), Postives = 151/306 (49.35%), Query Frame = 3
Query: 1104 GDSRVFVIAATA----NPTRLYTFAGGPT--LEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAADPFKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERAL--EGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
GD R +V+ T+ PTR++ F GG + LE MF EY FQELPG + ELR ++ R G F +LT GVYHG FG T ++V LL YP P SMA+T+YHV+LLY +QVVS+L+G VV E++ D++ G+V + D +W+ ++R ++V++++E R+VW L+L +A+ G++R F A C++ ER +V QA F +G+ RAA YAKT FEE+ALKF+
Sbjct: 369 GDLRYYVMLTTSASGKRPTRMFQFIGGGSGGLETMFNEYTSPDKLRFQELPGDITTAELRFYAKQERERAKG--------------------------------FGVLTGEGVYHGDFVFGLSSTMENVTTGTGLLAYPGKPDKSSGSRGSWTP------PISMAVTQYHVILLYTRHVQVVSKLSGVVVMEETFDSRVGNVHGITVDDTFNT--VWIHSNRRILEVMIADEDRNVWKLFLSKAVMGNGDDRDFEQALGVCRNGWERQRVLTAQADKLFDKGEYDRAAVIYAKTTRSFEEVALKFL 634
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: M4BGV5_HYAAE (Pep3_Vps18 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGV5_HYAAE) HSP 1 Score: 152 bits (385), Expect = 1.550e-34 Identity = 103/306 (33.66%), Postives = 150/306 (49.02%), Query Frame = 3
Query: 1104 GDSRVFVIAATA----NPTRLYTFAGGPT--LEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAADPFKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERAL--EGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
G+ R +V+ T+ PTR++ F G E MF+EY FQE+PG M ELR + R G F +LT GVYHG FG T ++V LL YP+ P SMA+T+YHV+LL+ +QVVS+L+G VV E+SLD++ G+V +A D +W+ + R ++V++++E RDVW L+L +A+ G++R F A C++ ER +V QA F +G+ RAA Y+KT FEE+ALKF+
Sbjct: 247 GEKRHYVMLTTSASGKRPTRVFQFMSGGRGGFEAMFQEYTSPDKLRFQEMPGDMTTAELRFYVKQGRERAKG--------------------------------FGVLTGEGVYHGDFVFGLSSTIENVTTGTGLLAYPSKPEKSSDGRGSWTP------PISMAVTQYHVVLLFARHIQVVSKLSGVVVMEESLDSRVGNVHGIAVDDTFNT--VWIHSSRRILEVVIADEDRDVWKLFLSKAVMGNGDDRDFEQALAVCRNGWERQRVLTAQADKLFDKGKFDRAAVMYSKTTRSFEEVALKFL 512
BLAST of mRNA_S-ischiensis_contig9.20538.1 vs. uniprot
Match: H3GBZ0_PHYRM (Pep3_Vps18 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GBZ0_PHYRM) HSP 1 Score: 150 bits (380), Expect = 6.010e-34 Identity = 102/306 (33.33%), Postives = 150/306 (49.02%), Query Frame = 3
Query: 1104 GDSRVFVIAATA----NPTRLYTFAGGPT--LEVMFREYRESGSTSFQELPGGMMNTELRLLYPEKNVRRCGVGGXXXXXXXXXXXXXXXXXXXPAGRPEPPRAFALLTSMGVYHGSLSFGPRETADSVVGEVRLLPYPAAVAXXXXXXXXXXXXXXXHVPRSMALTEYHVLLLYPGKLQVVSRLNGAVVQEDSLDAQWGHVLALAADPFKGAGHLWLFTDRTPVQVLVSNEGRDVWSLYLERAL--EGEERHFATAARHCKDDTERAQVYYVQAGWYFQQGQLTRAARYYAKTPCFFEEIALKFM 1997
G+ R +V+ T+ PTR++ F GG LE MF EY FQELPG + ELR ++ R G F +LT GV+HG FG T ++V LL YP P SMA+T+YHV+LL+ +QVVS+L+G VV E+S D++ G V + D + +W+ ++R ++V++++E R+VW L+L +A+ G++R F A C++ ER +V QA F +G+ RAA YAKT FEE+ALKF+
Sbjct: 245 GELRYYVMLTTSASGKRPTRMFQFIGGGPGGLEAMFNEYTSPDKLRFQELPGDVTAAELRFYAKQERERAKG--------------------------------FGVLTGEGVFHGEFVFGLSSTMENVTTGTGLLAYPGKPEKASGSRGSWTP------PMSMAVTQYHVILLFARHVQVVSKLSGVVVMEESFDSRVGSVHGITVD--ETFNTVWIHSNRRILEVVIADEDRNVWKLFLSKAVTGNGDDRDFEQALGVCRNGWERQRVLTAQADKLFDKGEFDRAAVIYAKTTRSFEEVALKFL 510
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 166.4 |
| Seed ortholog evalue | 2.4e-38 |
| Seed eggNOG ortholog | 2880.D8LI30 |
| Preferred name | VPS18 |
| KEGG ko | ko:K11303,ko:K20181 |
| KEGG Pathway | ko04138,ko05034,map04138,map05034 |
| GOs | GO:0000003,GO:0000149,GO:0000323,GO:0001667,GO:0001845,GO:0002064,GO:0002065,GO:0002066,GO:0002791,GO:0002793,GO:0003006,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005856,GO:0005884,GO:0006605,GO:0006622,GO:0006623,GO:0006725,GO:0006726,GO:0006727,GO:0006728,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006909,GO:0006914,GO:0006928,GO:0006950,GO:0006996,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007154,GO:0007220,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007568,GO:0007610,GO:0007632,GO:0007634,GO:0008055,GO:0008057,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008333,GO:0008340,GO:0008593,GO:0009056,GO:0009058,GO:0009267,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009790,GO:0009888,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010256,GO:0010259,GO:0010631,GO:0010646,GO:0010647,GO:0010648,GO:0010876,GO:0012505,GO:0015031,GO:0015629,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016477,GO:0016482,GO:0018130,GO:0019058,GO:0019438,GO:0019538,GO:0019748,GO:0019889,GO:0019905,GO:0019953,GO:0021700,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030154,GO:0030260,GO:0030674,GO:0030707,GO:0030855,GO:0030897,GO:0030903,GO:0031338,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032879,GO:0032880,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033060,GO:0033263,GO:0033365,GO:0033554,GO:0034613,GO:0034641,GO:0035542,GO:0040011,GO:0042440,GO:0042441,GO:0042558,GO:0042559,GO:0042594,GO:0042886,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043277,GO:0043324,GO:0043473,GO:0043474,GO:0043476,GO:0043482,GO:0043485,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045022,GO:0045176,GO:0045184,GO:0045202,GO:0045746,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046718,GO:0046872,GO:0046903,GO:0046907,GO:0046914,GO:0046942,GO:0048066,GO:0048069,GO:0048072,GO:0048278,GO:0048284,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048585,GO:0048609,GO:0048731,GO:0048753,GO:0048757,GO:0048856,GO:0048869,GO:0048870,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0050896,GO:0050931,GO:0051036,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051301,GO:0051640,GO:0051641,GO:0051649,GO:0051674,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0060034,GO:0060035,GO:0060036,GO:0060090,GO:0060429,GO:0060627,GO:0061024,GO:0061025,GO:0061356,GO:0061357,GO:0061462,GO:0061919,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0090066,GO:0090087,GO:0090130,GO:0090132,GO:0090174,GO:0090382,GO:0090385,GO:0090386,GO:0090387,GO:0090389,GO:0097352,GO:0097708,GO:0098657,GO:0098796,GO:0098927,GO:0099023,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140029,GO:0140056,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1904951 |
| EggNOG free text desc. | notochord cell vacuolation |
| EggNOG OGs | KOG2034@1,KOG2034@2759 |
| EC | 2.3.1.48 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03036,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| Model size | 2197 |
| Cds size | 1047 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817384.3975258-UTR-S-ischiensis_contig9:1194953..1194987 | 1622817384.3975258-UTR-S-ischiensis_contig9:1194953..1194987 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1194954..1194987 + |
| 1695741072.9727657-UTR-S-ischiensis_contig9:1194953..1194987 | 1695741072.9727657-UTR-S-ischiensis_contig9:1194953..1194987 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1194954..1194987 + |
| 1622817384.4891424-UTR-S-ischiensis_contig9:1200338..1200441 | 1622817384.4891424-UTR-S-ischiensis_contig9:1200338..1200441 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1200339..1200441 + |
| 1695741073.0672727-UTR-S-ischiensis_contig9:1200338..1200441 | 1695741073.0672727-UTR-S-ischiensis_contig9:1200338..1200441 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1200339..1200441 + |
| 1622817384.5007186-UTR-S-ischiensis_contig9:1200882..1201356 | 1622817384.5007186-UTR-S-ischiensis_contig9:1200882..1201356 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1200883..1201356 + |
| 1695741073.0785768-UTR-S-ischiensis_contig9:1200882..1201356 | 1695741073.0785768-UTR-S-ischiensis_contig9:1200882..1201356 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1200883..1201356 + |
| 1622817384.5127997-UTR-S-ischiensis_contig9:1203245..1203350 | 1622817384.5127997-UTR-S-ischiensis_contig9:1203245..1203350 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1203246..1203350 + |
| 1695741073.0913506-UTR-S-ischiensis_contig9:1203245..1203350 | 1695741073.0913506-UTR-S-ischiensis_contig9:1203245..1203350 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1203246..1203350 + |
| 1622817384.52334-UTR-S-ischiensis_contig9:1204375..1204498 | 1622817384.52334-UTR-S-ischiensis_contig9:1204375..1204498 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1204376..1204498 + |
| 1695741073.1066527-UTR-S-ischiensis_contig9:1204375..1204498 | 1695741073.1066527-UTR-S-ischiensis_contig9:1204375..1204498 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1204376..1204498 + |
| 1622817384.5355608-UTR-S-ischiensis_contig9:1206118..1206215 | 1622817384.5355608-UTR-S-ischiensis_contig9:1206118..1206215 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1206119..1206215 + |
| 1695741073.1273165-UTR-S-ischiensis_contig9:1206118..1206215 | 1695741073.1273165-UTR-S-ischiensis_contig9:1206118..1206215 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1206119..1206215 + |
| 1622817384.547137-UTR-S-ischiensis_contig9:1206996..1207210 | 1622817384.547137-UTR-S-ischiensis_contig9:1206996..1207210 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1206997..1207210 + |
| 1695741073.1389544-UTR-S-ischiensis_contig9:1206996..1207210 | 1695741073.1389544-UTR-S-ischiensis_contig9:1206996..1207210 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 1206997..1207210 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817384.412752-CDS-S-ischiensis_contig9:1194987..1195299 | 1622817384.412752-CDS-S-ischiensis_contig9:1194987..1195299 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1194988..1195299 + |
| 1695741072.9856505-CDS-S-ischiensis_contig9:1194987..1195299 | 1695741072.9856505-CDS-S-ischiensis_contig9:1194987..1195299 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1194988..1195299 + |
| 1622817384.4257302-CDS-S-ischiensis_contig9:1195969..1196129 | 1622817384.4257302-CDS-S-ischiensis_contig9:1195969..1196129 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1195970..1196129 + |
| 1695741072.9953487-CDS-S-ischiensis_contig9:1195969..1196129 | 1695741072.9953487-CDS-S-ischiensis_contig9:1195969..1196129 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1195970..1196129 + |
| 1622817384.4384906-CDS-S-ischiensis_contig9:1196196..1196249 | 1622817384.4384906-CDS-S-ischiensis_contig9:1196196..1196249 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1196197..1196249 + |
| 1695741073.0054693-CDS-S-ischiensis_contig9:1196196..1196249 | 1695741073.0054693-CDS-S-ischiensis_contig9:1196196..1196249 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1196197..1196249 + |
| 1622817384.4504478-CDS-S-ischiensis_contig9:1197942..1198021 | 1622817384.4504478-CDS-S-ischiensis_contig9:1197942..1198021 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1197943..1198021 + |
| 1695741073.0182078-CDS-S-ischiensis_contig9:1197942..1198021 | 1695741073.0182078-CDS-S-ischiensis_contig9:1197942..1198021 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1197943..1198021 + |
| 1622817384.464376-CDS-S-ischiensis_contig9:1199202..1199344 | 1622817384.464376-CDS-S-ischiensis_contig9:1199202..1199344 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1199203..1199344 + |
| 1695741073.0313025-CDS-S-ischiensis_contig9:1199202..1199344 | 1695741073.0313025-CDS-S-ischiensis_contig9:1199202..1199344 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1199203..1199344 + |
| 1622817384.4768326-CDS-S-ischiensis_contig9:1200037..1200338 | 1622817384.4768326-CDS-S-ischiensis_contig9:1200037..1200338 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1200038..1200338 + |
| 1695741073.044804-CDS-S-ischiensis_contig9:1200037..1200338 | 1695741073.044804-CDS-S-ischiensis_contig9:1200037..1200338 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1200038..1200338 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20538.1 >prot_S-ischiensis_contig9.20538.1 ID=prot_S-ischiensis_contig9.20538.1|Name=mRNA_S-ischiensis_contig9.20538.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=349bp
MANLFEEWDEMESRLMQAPPSRAQQRRPGSGWGAPQPSVGPPDSAPGVGS
GGRRGAATATTRRVGSSHDATAARDNPAVVARGGAGGPWRRGSLQAGLGE
MPARLGGGAGGGGGGLNSGTGSNPFGPGGNPFQGGAGGVGHSDGFSPIFS
LKQLDLLGRAFRAPTVSWSILAVAVGNNRLAMGTSDCRVIRWDLDRGSEP
EEIEVSRRPEDSIHKLFLDPTGSHLLVCLHAGETYYVHSSSSRPKRLPRW
SGVVVEAVAFDRQRGTDSATRSILVGARTGEIYEAALEATGKDRFFNLVY
HLGRGHQGGGGGGGEGGGGVRRGRRGRGRRGFRRRRREGGGVCRGAVL* back to topmRNA from alignment at S-ischiensis_contig9:1194954..1207210+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20538.1 ID=mRNA_S-ischiensis_contig9.20538.1|Name=mRNA_S-ischiensis_contig9.20538.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=12257bp|location=Sequence derived from alignment at S-ischiensis_contig9:1194954..1207210+ (Schizocladia ischiensis KU_0333)
TACCTGGGTGTGGGTCGTACAGTAGATCGGCGACATGGCTAACCTGTTTG
AAGAATGGGACGAGATGGAGAGCCGCCTTATGCAAGCCCCGCCAAGCAGG
GCGCAGCAACGCAGGCCAGGATCGGGATGGGGGGCGCCCCAACCTTCGGT
TGGGCCGCCCGACAGTGCGCCGGGCGTTGGGTCTGGCGGCCGTCGTGGCG
CGGCCACGGCTACGACCCGGCGAGTCGGCAGCTCGCACGACGCTACCGCC
GCCAGGGATAATCCGGCCGTGGTTGCCCGCGGTGGGGCAGGCGGACCGTG
GAGGCGAGGCTCCCTTCAAGCAGGACTTGGGGAGATGCCTGCAAGGGTGA
GTTACCTACCTGATATGTGCTGCCAATTTTGCACGGGCGCCTATTGCTCA
TTTGGCGGCAATTTTCCCTATTTCTTTTGCGCGCTTAAGAGTCCATTGAT
GGACAGCCGGATTCAGCACCTGCCTGCAGCCCAGCGTGGCTGCGCCAGTT
GATTTCATGTTTGCTACAGCCGTATTTTGAGAACATGCAGTAGGTGGGAG
CTGTTTTGCCTCCTCCAAAGCCGCGCTTTTCATGTTTTTCGCGTGTTGAG
TGGTTTGGGGGTGGTTTAGTTTACAGCTCTCTGCTCTCAATGCACTACAA
TATATTCCACTATAGCACTTCTTGGTACCAAAACACACAGCTGAGGGTCC
TCATTGTTGTGTGACGTCTCAAGTTCTTATGCACGTGTTGCCCTTTCCAC
GAATCAGCACCCGAGCGGTAACTTGAACATCGTCCCCCCTGCGAGCCTCT
TAGCCCCCGTACGTGATCCTCTACCTAGCACAGCGACCCAAAACCACGCA
GCACTTGTTCTTACTTCCCTGATGTGATAGTCACTAATATAGCAACATTC
AATTCTTAAATGAAACAACTACTAATATGAAAACAGTCAATTGCACACAC
GTACGATTGTACCTCGTTACAATTTATATGAATCACGCGGCACACGCCAA
CCAACCCTGTCTGCAGCTCGGCGGCGGCGCTGGCGGCGGCGGTGGAGGCC
TCAACAGTGGCACTGGCAGCAATCCTTTTGGCCCTGGCGGCAATCCCTTC
CAAGGTGGCGCTGGCGGCGTCGGCCACAGTGACGGATTCTCCCCTATCTT
CTCGCTAAAGCAGCTGGACCTGCTTGGTGCGGCGGCGGCGGCGGCGGCGG
CGGCGGGGGGGGGGGGGGGGGGGATTGAGCTTGCTGCAAGGAGGGCGGGC
ATTTAGGGCGCCGACCGTCTCATGGTCCATTCTGGCGGTTGCTGTGGTGA
GCAGTGATGGAATATCCAAGCAATCAACCTATTTATCGACAGTGCGGATC
TATTTTGAGTGGTAGATAAGCGGCGAGTTCCAGGCCCCGTGCCAAAAGGC
TCGTCCCGAAATGGGACTCAACGAAGCCCTTCCTTCCCTCGCAGGGCAAG
AAGACAACAAAAATGAGAAGAAACTGTATTTATATATCCATCGATAGTCC
ATATTCGATAGTTTGACCCACATTAAATTCAAGCAGTTAGTAACGCCACC
CACAAAATCAGTCGAGCCCGATTACTATCTACTGATCGATAGAACATCAC
TGGTGTGCGGTGGTTAGATGCTGCGTTGTTTGTTGTGAATCCTTTGGCTC
TGCCAGGGGAGGGAGGGGTCCTGCTGCGTCTCGACCGAGGCGCGTGGTCA
CTGGTCTCGGGACTGCGGCAAGCACCACGGGAGTACATATATATGTACTC
GTACTGCTGCTGCTACGACTACTACTACTTCTACTGCTGCTGCTGCTACT
ACTACTACTACTACTACTACTACTACTGCTACTACTACTACACTACTACT
ACTACTACTACACAGTTCTATCGCTACTGTGCACTTCCTCATCCTCCCCT
TCCAGGGCCTTCCTCCTCCCCGTCCTCTTCCCCCGCCCCCCCTCCTCCTC
TTCTGCCTCCTTCCTTCCCCCTCCCCCTTGCCCACACACAACCCCCTCCC
CTGGCGAGCTAAGGAAGGGCCGCGGTTGAGGTCTTTAGCGATGTGGCCTC
CACCTCGCCCTGTGTTTTTCCTGTTAATACTACTCGAGTACTACAGTACC
ACTACTGCAGTAATACTGCTGCTTAGTAATATGTCTCTGGACTACGGCAA
GCACAACTTGAGTACCTATATACACTAGTATTACTACTTCTACTGCCACT
CGAGCACTCTACGAGAAGTACTGCGAGCACTACTGCTGTTGTCCCCACTA
CTGCTGAAGCTGCTGCTACTACCACTACTGCTACTATTGCTGCACTACTG
TACACACTACTTCTAGTACTACTAGTAGGTACCACAGTACTACTACTACA
CTACTACTAGTACTTAGAGTACAACACAAATTTCCCCTGGCGAGCTATAA
GGAAGGGCCACTGCTGAGGTCTTTAGTGACGTGGCCCGCACCTCGCCCCG
TGTTGTTCCTGTTAATACTGCTGCTACTTCTACTACTACCACTGCTACTA
CTATTGCTACACTCCTGTACCCACTGGTACTACTTCTACAGTAAGTACTA
CTGCCACCTCTACTCTGGTACTAGAGTCCAACAACTGGTACTCGAGTACT
ACTGCTACTACCCATCAAGCACTCTGCACTTCATAAGTAGTTGCTCATTG
CCGCTTCCTCAACCGTCAGGGGAACAACCGCCTGGCCATGGGGACTGCTA
CTCTTTTCCTACACTACTGTACGCACTACTACTACGTCTGTAGTAGTAGT
GTAGTTGTTGTTGCAGTAGCAGTAGAGGTGGTAGTAGCAGCAGCAGTAGT
AGTAGTAGTGGTAGTAGTAGTGGCAGGGGGTTGTTCCCCTGACGGGTGAG
GAAGCGGCAATGAACAACTATGAAGTGCAGAGTGCTTGAAGAGCAGCAGT
ACAGTAGCAGTTGTTGTTGTACTCTACTGTAGTAGCAGTACTGATACAAC
AACAACAACTACTGTGACTACCCTCACCCGTTATGGCAGGGGAACAACCG
CCTGGCCATGGGGACATCGGACTGCCGCGTCATACGCTGGGACCTGGATC
GGGGGTCGGAGCCCGAAGGTGGGCTACGGTCCACCCCCAGTTGGCCAGTG
ATGGAATATCTAAATTATGCAAAGCAGCCTTTTATCGACAGTACTGAATT
TTGAAACTATTTGGATGGCATGCGAATTCCGGGCCCCGTCCCAACAACCT
AGGGTGGGGATCTCACCAGAAGCCCTTCTTTTCACCCGTAGGGCACAAAA
ATCAAGAAAAGAAGTCACTAAGGGGGGCAATGCAGGGGCAGTACGGGGGC
AATGTAGAGGGGTCTCTCTCGTGCCGCGTTGCGGGACGTACCTGTAAGAG
CGTGCAGGTGGTGAAATTGCAGATGACGGATCTATATATCTATCGATAGT
CGATATTCGATAGTTTGACCCACACTACATCCAAGTATTTAGTATCGATA
ACTATCTACTGATCGATATTCCATCACTGCCCCCAGTTGGCTGAAGCACT
CCCTGCTGTAGGCCCTCTCACCGGCAGTTGCCCCTTCTCACTTGTCTCCC
GTGGTGGAAGTACTCGATACTGCGCTTTCATTGGCCACGGACCCTTCTCA
CTTCTCGCTCATTGGCTGAATGACTCACTCCTGTGCTCTCGTTCAAGTGT
CTTAGACAGCTTCCCGGGGTTGTGGGGAGAGGGGCCGAGTTTGTGCAAGT
TTGGGCACGACTTCGGGTCATTTGGGCCTTTTTGGGGCCGGATTCTGTGC
TCTCTTTCAGTGTCACGACAGGTTCCCGGGATTGTGGGCGGAAAGGACGA
GTTTGGGCGAGTTTGGCCACAATTTCGGGCCATATTGGCCATATTGGGGC
CGGATTTTGGGCGGCGGGTCGCCCACGAAACGGCCCTACTCTATCTGAGA
CACACTGCTCTCGTTGGCTGTTTCCCCTGCTCACTTCTCTCCCGTTTGCA
GGAATACTCACTCCTGTGCTCTCGTTGGGTGTTTTCCCTTCCCTCTTTTC
TCCCGTTGGCCGAAATACCCCCTGCTGTGGTCTCACTGGCTGTTTCACCT
TCTCGCTTCTCTCCTGTTGGCTGAAATACTCACTCGTGTGCTCTGATTGG
GTGTTTTCCCTTCTCTCTTCTCTCCCGTTGGCTGAAATACCCCCTGCTGT
GGTCTCATTGGCTGTTTCCCCTTCTCGCTTCTCTCCCGTTGGCTGAAATA
CGCTACCATCACAAGCAAGACCCCCCCTCGCACGGCCCCTCCTTGTCAGA
GATTGAGGTGTCCCGCCGCCCAGAGGACAGCATCCACAAGCTCTTCCTGG
ACCCCACGGGCAGCCACCTGCTGGTGTGCCTCCACGCCGGGGAGACCTAC
TACGTGCACTCCTCCTCCTCGCGCCCAAAACGCCTCCCCAGGTGCGAGCT
CACAATTTTTCCCGAATACCATAGAGTTCTGTATTGATAAAAACATTGGT
AGATCACATTGAATATATATTGAATATTGATCAATATTGATGTATGCACT
CCTCCTCCTCGCGCTCAAAATGCCTCCCCAGGTGTGACTTTGGTGCGACG
CCTCGGTGTACAAATACTTGCACACAATCTGCTGAGGGTAGTTGTTCCGG
GAACCAACTACGAGTAGTTTTGTCCACGAGTCCAAGAGGTCAGTTGCCCC
GGGGACCAACTACTTTGTATTTGCACACGATCTGGCGAGAGTAGTTGTCC
CGGGACCAACTACTTCCGGGACAACTACTTAGTTGCCCACGTTTTCGGCC
AACCAGTTGCGCCCACATTTTTACCCGAATACCAGTATGTGCATTTTTTC
GGAGTGCACTCCTGGTAAGTACTTTGTACAGTAGACGATGACCCCCCGCC
TTCACCAACCAAATCCGGGCCACGCTCCCCACATCTCTCTCTCTTCTCTC
TCTCTCTCTCTCTTTCTCTCTCTCCCTCTCTCTCTCTCTCCCTCCCCCCC
CCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCCCTCTCTCTCTCCCTCCCTCGCTCCCTCCCTCCCTC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCAGGTGGTCCGGGGTGGTC
GTCGAGGCCGTGGCCTTTGACCGCCAGCGGGGCACCGACTCTGCCACCCG
CTCCATCCTGGTGGGCGCCCGGACCGGCGAGATATACGAGGCCGCCCTCG
AGGCTACCGGCAAGGACCGATTCTTCAACCTGGTCTACCACCTTGGAAGG
GGACATCAAGGGGGCGGCGGAGGCGGCGGCGAAGGAGGCGGGGGGGTCAG
GCGGGGGCGGCGGGGGCGGGGGCGGAGGGGTTTCCGGCGGCGGAGGCGGG
AGGGGGGGGGTGTCTGTCGCGGCGCTGTACTTTGAGGCGGCGAGCTCGGC
GGTGCATGGAGACTCGCGGGTGTTTGTGATCGCCGCCACGGCCAACCCGA
CAAGGCTGTACACGTTTGCTGGCGGGCCGACGCTCGAGGTGGGGTGTTCT
CTCTCTCTCTGTGGCTAGCTAAGTTTCCCTTGGTCTCTTTCTCTCCCCTC
TCTCGTCTCTCCTCCTTCTCTGTGCGGGCGGGGCATATGCCTGCTCTCTC
TCTCTCTCACTCTCTCCGTCTCCCTAGGTTTCCCTTGGTCTCTTTCTCTC
CCCTCTCTCTCGTCTCTCCTCCCTCTCTCTGCGGGGGTGTACCTACGCTT
GACGAGAGTGTTTACGTCCTTGTGGTTGCTTTGTCCACTCGTGCGCTTGT
CCGTGTGCCATCACCCTCAACCCCGCGTGATAATCACTAGTAACTTATAG
GCGACCTCAATTCTTAAATGGGACAACTACTAATACGAGAGCAGTTAATC
TCACACACGTGCAATTGTACCTCGATACATTTTATATGAGTCAACACCCT
CAACCCCGCACTAACCCCCCCCCCCATAGGTCATGTTCCGTGAGTACCGC
GAATCAGGGAGCACTTCCTTCCAGGAGCTCCCCGGGGGGATGATGAACAC
TGAGCTGCGCCTCCTCTACCCCGAGAAAAACGTGCGGCGCTGTGGCGTCG
GCGGTGGCGGCGGCGGCggcggaggggGGGGGGGGGGGGCTTCCGGGGCT
GCTGCAGCCGCCCCCGCTGGACGACCAGAGCCGCCCCGAGCATTCGCCCT
GCTCACGTCCATGGGTGTCTACCACGGCAGTCTGTCCTTTGGGCCGAGGG
AGACGGCGGATAGTGTCGTCGGCGAGGTGCGGCTGCTTCCGTACCCGGCG
GCGGTGGCGGCGGCGGCGGCCGGGGGCGGTGGCGGCGGCGGGGGGGGCGG
GGGGCACGTGCCCCGGTCTATGGCGCTGACGGAGTACCATGTGCTGCTGC
TGTATCCGGGGAAGCTGCAAGTGGTGAGCCGTCTCAATGGGGCAGTCGTT
CAGGTGAGATGGAAGGGAGGGCGAGAATGGCAGGTGTTGAAGTACCTCGT
CTCATGGTTAAACGCTGTTCATTAGTGCCGTTCAGAGAGGCGGTGAAGGC
TTGGGGGCCTGTGCTGACAATGGCAGAAGCAGCAGGAATACCTAAGGTGT
AGTGAAGGGAGCTAGGGATTCTCCTAAGACTGAGTGTGCTACAAGGGGTT
GTAAAGAGTCTTGTATGAGGAGACAAGAGGCCATGTGTGTCGTTATACTT
CGTAAACATCATGGATGCAGGTGTTATGACAGAAGGAAAGGGAAGGGAGG
GATGGGGGACGAGGGAAGGTGGGGGATGGGGGAGGTGGGGGAGGGAACGA
ACGTGGATGGGAGGGCGAGAGGGTGGAGGGGAGGGGAGGGGTTGATGCAG
GAAGGGTCTCGGGTGTCGAGCGGGATGCGACCGTGGCGGCGCTGTGGAGT
TGCACTACTGTGCAGTACCGTAATCGTCGGAGAGATCTTGCCCCCCCATG
CCAATTTTCGGGAGAACTTTTCTCGCCGAATACTGGCCAGATTCGCGCGG
GAAAACTCGGAAAATCTTCCTCAAAACCTGGGAACTTTTCCGAGGGCTTT
CGGGACAATCCAGGACCTTCCGGGGAGGAAATATTCCCCCCGAAAATTGT
CCCGTGGGGGCAAGACCTCTCCGACGATTGTGGTATTTGCATCTCTGTGG
TGTGGTGTTGTAGTGCGGTGCTCAGAAGAAGCTTGTCGTATTTTTGCGCC
AAAAGTGGAGCAACAACAGGGTTACGTGCTCTTCTTCCGCCGGAGTGCTG
GTGCGAGCACCGCCTGCTGATACGCTTGCCAAGTACTCGTATGTACTATC
AGGAACAACACAGGGCGAGGTGCAGGCCACGTCACTGAAGACCTCAGCAG
TGGCCCTTCCTTCTAGCTCGCCAGGGGAATTTGGTGTGGGGAAGGGGAGA
AGAGGAGCAGGGGGAGGTGGACAGGGAGGAGGAGGGGTCGTATGTAGAGC
TACTTGTAGGTTGTGAAAGCGGCGACAAGTTTGACCAGCCAGGACCAATC
AGTCGGCAAGAAAGGGAGACCGGCCGGCCGGCCTGGAGGCCGGTTCTTCT
TTTCTATAGCCCCTTTGATTTCATGCCTGTTCGGACATCCGACATAGCCG
TTGCGTCCCGACCTTATCGTTAGCCCTTTTACCCCTGGGGTCTGTATAAT
CATAGGGTTTTAGGGTGTAAGTCCAATTTACCAGGGGTATAAGGGTTAGT
AGGGTAGTTGCTGGAACCAGATGTATGTGGAGAATCTGCGCCTGCCCGCC
TTGTCCCCCCCCTGCCCCCCCCCAGGTCCTCACTTCTGGGTGTAGTCACT
GCCCCAGTGATGCAATATCTATCAGTACATATTTATCGAGCTTGACTGAT
TTTGTGGGTGGCGTTGCTAACTACTTGGATTTAGTGTGGGTCAAACTATC
GACTATCGACTGTCGATAGATATATAGATCTTGCCCTGCGAGGGGAAGAA
GGGCTTCGTTGAGTCCTGTTTCGGGACGAGCCTTTTGGCACGGGGCCTGG
AACTCCCCGCTTTTCTACCACTTAAAACAGATCAGTACTGTCGACAAATA
GGTTGATTTGCTTAGATATTCCACCACTGCAGAGCCCCCTTCCCCCCCCC
CCCCGGGGACAAGTGGTCAATGGCCGACCTGCTTCCACCAGCACGTCGGG
GTATAATAGCCGTACCACACCCCTTACCGACACTGACACTAGAACCCAAA
CCACCACCACCACCACCACCACCACCACCACCACCACCACCGCCATCACC
ACCACTACAACCACCACCACCATCTCCGCCTCAAGTGCCGCCTGCTGACA
CCCCTGCCCTCTCCCCCCCCCCGCCCCTGGTGGCCTGCTCAGGAGGATAG
CCTGGATGCGCAGTGGGGCCACGTCCTGGCCCTGGCCGCCGACCCGTTCA
AGGGCGCCGGACACCTCTGGCTCTTCACCGACAGAACCCCGGTGCAGGTG
GGCTTGATACCATGTGATGTGATGCCAAAGTGCGGTATGTAAGAGGCTCG
TCACATCGATTGTGATGATACGGTGCGATGTTATGCAATGTGATGGGATG
GGATGGGATGCCAAACTACAGTGCATTAGAGTGCACATCACATCACATCA
CATCACACACCGTGAATTGTCGGAGGGCATTTCTCGCCGGGTACTGGGCG
GATCCGCAGGGAACAACCCGGGAATATTCCCTCAGGACCTGGAGTAGCTA
CTTAGACCGAGGGATTGCGGAGAAAAATAGAGTCTTCGTACCCCGCGAGA
AATGTTCTCCCAACTTTTGTCGGATCTGCACAGGAGAAGCCGGGAACATG
CCCTCAGGACCTGGAGTGGTTAGCCCGAGGGATTTAGGGAAAAAAAGGGA
ACCTACCCCGCGAGAAAACTTTCTCCAAAAGTTTGTCCCGGGGGGGCGAG
ATCTCTCCGGTGAGATATGCGGTACGTACTTCCAAGTATGTGATGTGATG
CGATGTGATGTGATTCGATTTGATGCGATGTATACTCTAATGTACTGTAG
TTCGACATCACATCGCATCACATCACAAGATCGTCCCGCGGGGGCAAGAT
CTCTGCGGTGATTGCGGCACTGTTGTCCTCTAACTCAACGGCTACGGCAA
CCCCTCTTGTTGCGCCCCAGGTGTGCGAGGACACTCATTCTCACACACAT
GCGATTGTACCTCGATACTATTTTTTGGCATGAAAATAGCAAGCGAGTGG
AAAAGAGGAGGTGCTCCTACCTACGCGAGTTGAGGGCCCCCTGCCCCGCA
AGCCCGTCTTTTCACACGATACCATTTATGCGAGAACACTCAATTCTTAA
ATGGGAAAACCACTACTGTAATACTAGAACACACACGTGCGATTGTACCT
CGTTACAATTATTTTGAATTGTGGTTTGACATGCGAGTTCTGGGCTCCGT
CCCAACAACCTAAGGTCGGGACCTCACCAGAGGCCCTTCTTGGCTCGCAC
TTTGCATGAATCACACCCCCAGGTGCTGGTGTCGAACGAGGGCAGAGACG
TGTGGAGCCTCTACCTGGAGCGGGCGCTGGAAGGGGAAGAGAGGCACTTT
GCCACCGCCGCACGCCACTGCAAGGACGACACCGAGAGGGCACAGGTGAT
GATTCATGTAAATTGTAACGAGGTACAATCGCACGTGTATGAGATTGACT
GTTCTCGTATTAGTAGTTGTCCACTGAGAGGGCACAGGTGCTTGGGGCAG
AGGGGCCGGGTGGTGGGGAGGCAGGGAGGGACATCGTTTGATGTGATGTG
TGCTCAAATGCACTGTAGTTTGACATCACATCACGCTACGTCACACCAGT
TTGATTGATGTCGTTTGACGTGGTGCGTACTCAAACGGACTGTAGTTTGA
CATCACATCACGCTACGTCACACCCGTTTGATTGATGTGGGGACGAGGGG
CACTTTGCCACCGCCACGCGCCACTGCAAGGACGACACCGAGAGGGCACG
GGTGGTGATACGTATAAATTGTAGCGAGGCACAATCAATCGCACGTGTGT
GAGATTGACTGTTCTCGTAATTGTAGTTGTCCCACTGCAAGGACGATACC
GAGAGGGCACAGGCGGTGATTAATGTACATTGTAACGAGGTACAATCGCA
CGTGTGTGAGATTGACTGTTCTCGTATCGGTAGTTGTCCCACTTAAGGGA
GGGGTCCTGCTCCGTCTCGACCGAGGCGCGTGGTCAATGGTCTCGGGACT
GCGGCAAGCACCCCGTGAGTGCATATACCATATATATTTGCGAATTGAGT
GTTCTTATAGTAAGCCTGGTGACTATCACAGGTGGTTTTGCGGCGGAGGG
GCCGCGTGGTGGGGAGGGAGGGGGGAGGGAGGAGGAGGGGAGGGAAGGAA
TGGGAGAGAACAGGGAGAGAAGAGGGAGGAAGGGCTGCCAGGAGGGAGGG
AGGGAAGGAGGTGGGAATAGAGGGGGCAAGGGGGAGGGATGGCGGGAGGG
GGGCGGAGAGGAAGGGAGGTGGGAGGGCGGGCAGGAGAGAGGGAGCGAGA
GAGAGAGTGAGAGTACAGAACCGGTTTTAAACTCGCGTGAGTAGGAGCAC
CTCTTCTTTCCCACTCGCTTGTTTGTCTTCATGCAAGAAACAGCTTCTAA
AGTGTGTACTTTGTACCTCCCCAGTAGCAGTAACTGCTCGGACCACTCGA
GTCAGCACAGTACTGCCAAGCGCCGTGCTGGCAGCAGCATGTGCAGTACA
GTAGTGCTGCGCTGCACTCGAGTGCAGTACGAGTAATACTCGTACAGTAC
ACGCCAACACCGACCGGACATGAGAACGTGGGCGAGAGAACCCCAGACCT
GCCACAGTACCTACTGTGCGGTAGGCACGTTGCCCTTGGACTAGGTAGGG
ACTGTGAAGCTTAGCCCTTTTGCCCCTGGAAAATTTGACTCCCATTCCAA
ACCCTATGACTATGCGGACCCCAGGTGTACAAGGGCAAACCCTTTTACCC
CTGCTGAATGGGACTTACACACTAGAACCCTATGATTTTTTCGGACCGCA
GGGGTGAAAAAGTTAACTTGGACACCAGCCCCTCTCGACTGCACTGTTGT
ACTGTATCCTACGGTAGGCACGTTGCCCTTTGGACTAGGTAAGTAGGGAC
TGTGAAGCTTCACTTGCATATGTAGGAACACCTCTTCTTTCCCGCTCACT
TGTTTGTCTTGTTGTTTGGGCACCGACCCCTCTTGACTGCACTATTGCAC
TGGACTCCCCGGCAGGTGTACTACGTGCAGGCCGGGTGGTACTTCCAGCA
GGGGCAGCTGACACGTGCCGCCCGCTACTACGCCAAGACACCGTGCTTCT
TCGAGGAGATAGGTAGGTGTGCTTGCCCCCTGATAGGTATGCTGCTCGCC
CTCTGACAGGTGTGCTTGCCCTCTGATAGGTGTGCTTGCCCTCTGGTAGG
TGCGCTTGCCCTCTGATAGGTGTGCTTGCCCTTTGATAGGTATGCTTGCC
CTCTGACAGCTGTGCTCGCCCTCTGATAGGTGCGCTTGCCCTCTGATAGG
TGTGCTTTTGCCCTCTCCCCTCCTCCTACTCCCTCACTCCCTCCCTCCCC
CCTCTTCCTCCCTCTTACTACGCCAAGACACCGTGCTTCTTCGAGGAAAT
GGTCTGCTTGCCGCTCCCCTCCTCCTGTTCCCTCCCTCCCGCCCTCCCTC
CCCCCTCCTCTTTCTCCCCCCCGCCCTCCCTCGAGGAGATAGGTGTGCTT
GCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CGTTCCCCCTCTCCCCATTTCGCCCCCCTTCCCTCCGTCGCTCTTCCCTC
CCCCTCCCCCTCCTCCCTGTCCCACCTTCTTCCCTCCTTTCCTCCCCTCT
CCATTTTTTCCTCCCTCTCTCCCCTCCCTCCCTCCCCTCCCTCCCTCCCT
CTGTCCCTCCCTCCGCCCCTCCACTCGCCTGCTCCCTTCCGCCTGTCCGA
AGCCGTGCTCGCACCCATATCGTCCCACACATGGTGTCATTCACGACTCG
CGGAGTATCGATTGAGTGTTCTCCTCACGGTTACCCTGCATACCCCCACC
CCGTGCCGGGCGGTCTCTTTGCCCGGCACTCCTCCCCCCCCAGCCCTGAA
GTTCATGGGAGACAGCGGGATACGCCCCTCCTCCTCCTCCTCCTCCTCCG
CCGCCGCCGCCGCCCCTTCCTCCTCCCCTGCCCGGACGCGATCGCCTGCC
AAGCCGTCCGACTCCAAGTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGC
CTCATCGGAGGAGGCCCTCAAGACCTACCTCCTGGAGAAGCTCCGCAACC
TGTCCTC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:1194954..1207210+ >mRNA_S-ischiensis_contig9.20538.1 ID=mRNA_S-ischiensis_contig9.20538.1|Name=mRNA_S-ischiensis_contig9.20538.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2094bp|location=Sequence derived from alignment at S-ischiensis_contig9:1194954..1207210+ (Schizocladia ischiensis KU_0333)
ATGGCTAACCTGTTTGAAGAATGGGACGAGATGGAGAGCCGCCTTATGCA
AGCCCCGCCAAGCAGGGCGCAGCAACGCAGGCCAGGATCGGGATGGGGGG
CGCCCCAACCTTCGGTTGGGCCGCCCGACAGTGCGCCGGGCGTTGGGTCT
GGCGGCCGTCGTGGCGCGGCCACGGCTACGACCCGGCGAGTCGGCAGCTC
GCACGACGCTACCGCCGCCAGGGATAATCCGGCCGTGGTTGCCCGCGGTG
GGGCAGGCGGACCGTGGAGGCGAGGCTCCCTTCAAGCAGGACTTGGGGAG
ATGCCTGCAAGGATGGCTAACCTGTTTGAAGAATGGGACGAGATGGAGAG
CCGCCTTATGCAAGCCCCGCCAAGCAGGGCGCAGCAACGCAGGCCAGGAT
CGGGATGGGGGGCGCCCCAACCTTCGGTTGGGCCGCCCGACAGTGCGCCG
GGCGTTGGGTCTGGCGGCCGTCGTGGCGCGGCCACGGCTACGACCCGGCG
AGTCGGCAGCTCGCACGACGCTACCGCCGCCAGGGATAATCCGGCCGTGG
TTGCCCGCGGTGGGGCAGGCGGACCGTGGAGGCGAGGCTCCCTTCAAGCA
GGACTTGGGGAGATGCCTGCAAGGCTCGGCGGCGGCGCTGGCGGCGGCGG
TGGAGGCCTCAACAGTGGCACTGGCAGCAATCCTTTTGGCCCTGGCGGCA
ATCCCTTCCAAGGTGGCGCTGGCGGCGTCGGCCACAGTGACGGATTCTCC
CCTATCTTCTCGCTAAAGCAGCTGGACCTGCTTGCTCGGCGGCGGCGCTG
GCGGCGGCGGTGGAGGCCTCAACAGTGGCACTGGCAGCAATCCTTTTGGC
CCTGGCGGCAATCCCTTCCAAGGTGGCGCTGGCGGCGTCGGCCACAGTGA
CGGATTCTCCCCTATCTTCTCGCTAAAGCAGCTGGACCTGCTTGGGCGGG
CATTTAGGGCGCCGACCGTCTCATGGTCCATTCTGGCGGTTGCTGTGGGC
GGGCATTTAGGGCGCCGACCGTCTCATGGTCCATTCTGGCGGTTGCTGTG
GGGAACAACCGCCTGGCCATGGGGACATCGGACTGCCGCGTCATACGCTG
GGACCTGGATCGGGGGTCGGAGCCCGAAGGGGAACAACCGCCTGGCCATG
GGGACATCGGACTGCCGCGTCATACGCTGGGACCTGGATCGGGGGTCGGA
GCCCGAAGAGATTGAGGTGTCCCGCCGCCCAGAGGACAGCATCCACAAGC
TCTTCCTGGACCCCACGGGCAGCCACCTGCTGGTGTGCCTCCACGCCGGG
GAGACCTACTACGTGCACTCCTCCTCCTCGCGCCCAAAACGCCTCCCCAG
AGATTGAGGTGTCCCGCCGCCCAGAGGACAGCATCCACAAGCTCTTCCTG
GACCCCACGGGCAGCCACCTGCTGGTGTGCCTCCACGCCGGGGAGACCTA
CTACGTGCACTCCTCCTCCTCGCGCCCAAAACGCCTCCCCAGGTGGTCCG
GGGTGGTCGTCGAGGCCGTGGCCTTTGACCGCCAGCGGGGCACCGACTCT
GCCACCCGCTCCATCCTGGTGGGCGCCCGGACCGGCGAGATATACGAGGC
CGCCCTCGAGGCTACCGGCAAGGACCGATTCTTCAACCTGGTCTACCACC
TTGGAAGGGGACATCAAGGGGGCGGCGGAGGCGGCGGCGAAGGAGGCGGG
GGGGTCAGGCGGGGGCGGCGGGGGCGGGGGCGGAGGGGTTTCCGGCGGCG
GAGGCGGGAGGGGGGGGGTGTCTGTCGCGGCGCTGTACTTTGAGTGGTCC
GGGGTGGTCGTCGAGGCCGTGGCCTTTGACCGCCAGCGGGGCACCGACTC
TGCCACCCGCTCCATCCTGGTGGGCGCCCGGACCGGCGAGATATACGAGG
CCGCCCTCGAGGCTACCGGCAAGGACCGATTCTTCAACCTGGTCTACCAC
CTTGGAAGGGGACATCAAGGGGGCGGCGGAGGCGGCGGCGAAGGAGGCGG
GGGGGTCAGGCGGGGGCGGCGGGGGCGGGGGCGGAGGGGTTTCCGGCGGC
GGAGGCGGGAGGGGGGGGGTGTCTGTCGCGGCGCTGTACTTTGA back to top
|