mRNA_S-ischiensis_contig9.20521.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20521.1
Unique NamemRNA_S-ischiensis_contig9.20521.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A836CL36_9STRA (Katanin like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL36_9STRA)

HSP 1 Score: 644 bits (1662), Expect = 4.500e-223
Identity = 344/455 (75.60%), Postives = 382/455 (83.96%), Query Frame = 2 
Query:   20 MDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSS-GPESANACRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            MDN F+PKAI TV +AI ADNAQ+Y+ AL LY+K+LEYFM GLKYE NP  K TIM RV+GYMKRAE L+ IL KQA+AK         XXXXXXXXXX            KKLRGALAGA+VSEKPNVKW DVAGLE AKSALKEAVILPA+FPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREH R+IIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDG+LVLGATNVPWELDPAMRRRFEKRIYIPLPEA ARA MF++HLGDT NTL D +++ LG  SEGCSGSDISVITREALMEPLRKCQ AKQF+P   G  ML+PA+KYP+C +CPM+L+S    +         AVR++LY++ T+KL+VPDV++ADF  AL++SG+SV  DELTRF EWT+EFGQEG
Sbjct:    1 MDNSFLPKAISTVTEAIAADNAQEYEQALALYRKALEYFMTGLKYEKNPATKQTIMDRVEGYMKRAELLRGILDKQAEAKXXXXXXXX-XXXXXXXXXXSDAKDTGIDEEKKKLRGALAGAVVSEKPNVKWDDVAGLEAAKSALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHPRSIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGLLVLGATNVPWELDPAMRRRFEKRIYIPLPEAPARANMFQIHLGDTSNTLSDHNYSELGELSEGCSGSDISVITREALMEPLRKCQAAKQFIPDAQG--MLTPADKYPNCPHCPMQLTSDPAGKKXXXXXXXKAVRVSLYDVPTEKLVVPDVSFADFKSALQRSGASVSPDELTRFTEWTREFGQEG 452
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A6H5L4E7_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4E7_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 8.150e-196
Identity = 287/343 (83.67%), Postives = 307/343 (89.50%), Query Frame = 2 
Query:  353 KKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANACRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            KKLRGAL GAIVSEKPNVKWSDVAGLEQAKS LKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHER+IIFIDE+DSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPE EAR++MFKLHLGDT NTL DQ+F  LG  +EGCSGSDISVITREALMEPLRKCQ AKQFVP      ML PAEKYP+C  CP  L++   +    C  C A+R++LYE+ T+KL+VPDV Y DF+KAL KSGSSV E+ELTRFVEWT++FGQEG
Sbjct:   41 KKLRGALEGAIVSEKPNVKWSDVAGLEQAKSTLKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERSIIFIDEVDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEPEARSIMFKLHLGDTANTLTDQNFETLGDKAEGCSGSDISVITREALMEPLRKCQTAKQFVPTK--DNMLIPAEKYPNCPYCPQDLTTRPAKMGEVCPTCKAIRISLYEVPTEKLLVPDVCYDDFLKALTKSGSSVSEEELTRFVEWTEDFGQEG 381
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A7S2HM33_9STRA (Vesicle-fusing ATPase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HM33_9STRA)

HSP 1 Score: 560 bits (1442), Expect = 5.490e-190
Identity = 307/454 (67.62%), Postives = 362/454 (79.74%), Query Frame = 2 
Query:   20 MDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANACRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            M+N+FIP AIE V  AI AD  ++Y+ AL LY+ +L  F  GLKYE N   K  I++RV+GYMKRAE L+D L+KQ++ ++   +GG     XXXXXXXXXXXXXXXXXX KKLRGALAGAIVSEKP+VKW DVAGL+ AK +LKE VILP +FPQLFTGKRRP+KGILLYGPPGTGKSYLAKAVATE+D+ FF+VSS+DLVSKWQGESE+LVRNLFE+ARE  RAIIFIDE+DS+CGSRSEGE+DSARRIKTEFLVQM GVG+    +LVLGATNVPWELD A+RRRFEKR+YIPLPE EAR  M KLHLGDTPN L ++DF  LG  ++G SGSDI V+ +EALM+PLR+CQ AKQF P    G  L P EKYPSC  CP KLS+  P     C+ CGA+RM L++++ +KL  PDV+  DF KALE S SSV  +EL RFV+WTK+FGQEG
Sbjct:    1 MENKFIPDAIEIVSKAIEADKNEEYEKALALYRDALGRFTMGLKYEKNESRKKLIIERVEGYMKRAEELRDYLSKQSELEN---KGGX----XXXXXXXXXXXXXXXXXXKKKLRGALAGAIVSEKPDVKWDDVAGLDLAKDSLKETVILPTRFPQLFTGKRRPFKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSADLVSKWQGESERLVRNLFEMARESGRAIIFIDEVDSLCGSRSEGESDSARRIKTEFLVQMDGVGSKQGEVLVLGATNVPWELDAAIRRRFEKRVYIPLPEREARTYMVKLHLGDTPNNLTEEDFDKLGEMTDGASGSDIKVLVKEALMQPLRRCQQAKQFQP---DGEFLVPCEKYPSCPRCPPKLSTDKPGKDYTCKHCGAIRMQLWDIQPEKLKAPDVSRKDFEKALEHSCSSVSPEELQRFVDWTKKFGQEG 444
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A7S3K4J8_9STRA (Vesicle-fusing ATPase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J8_9STRA)

HSP 1 Score: 558 bits (1438), Expect = 3.620e-189
Identity = 295/462 (63.85%), Postives = 356/462 (77.06%), Query Frame = 2 
Query:   26 NQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGT--------MLSPAEKYPSCDNCPMKLSSSGP--ESANACRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            N FI + +E V +AI ADNA++Y+ ALGLYK++LE FM G+KYE NP A+ TI+QRV+GYMKRAE LK ++ ++  A  G   GG G      XXXXXXXX        +KLRG LA AIV+EKPNVKWSDVAGLE AK+ALKE +ILP KFPQLF GKR+PWKGILLYGPPGTGKS+LAKAVATE+DA FFAVSSSDLVSKWQGESE+LV+ LF LAR+ E +IIFIDE+DS+CGSRSEGE+D+ RRIKTEFLV MQGV +T+DG+LVLGATNVPWELDPA+RRRFEKRIYIPLPEA ARA M +LHLGDTP+TL  QDF  +   +EG SGSD+S++ REALMEPLRKCQ A+QF+P  PG +        +L P  KYP+C  CPM+LSS  P  ++   C +C A RM LY++ + +L VP+++Y DF+  L K+  SV  +EL RFVEWT  FG EG
Sbjct:    4 NNFIKQGVEVVSEAIAADNAEEYEKALGLYKRALEVFMTGVKYEKNPAARDTILQRVEGYMKRAEDLKGVIEQRRAA--GTSSGGRGGAATKDXXXXXXXXADEEQ---QKLRGQLASAIVTEKPNVKWSDVAGLEGAKAALKETIILPQKFPQLFVGKRKPWKGILLYGPPGTGKSFLAKAVATEADAKFFAVSSSDLVSKWQGESERLVKQLFSLARDEEHSIIFIDEVDSLCGSRSEGESDATRRIKTEFLVAMQGVASTNDGLLVLGATNVPWELDPAIRRRFEKRIYIPLPEAAARARMIQLHLGDTPHTLAQQDFEAIADDTEGFSGSDLSIVVREALMEPLRKCQTARQFIPV-PGNSNTDDSSAPLLQPCAKYPNCAYCPMQLSSDPPGDDTFPQCSRCKAFRMALYDVPSAQLKVPEISYDDFLHVLAKARKSVAPEELGRFVEWTNNFGAEG 459
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A7S1YIP4_9STRA (Vesicle-fusing ATPase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIP4_9STRA)

HSP 1 Score: 552 bits (1423), Expect = 1.000e-186
Identity = 284/455 (62.42%), Postives = 340/455 (74.73%), Query Frame = 2 
Query:   17 TMDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANACRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            TM+N+FIP AI+ V  AI ADN  +Y+ AL LY+ +L  F  GLKYE N Q K TI+ RV+GY+ RAE L+D L KQ++    +D+ G G                      KKLRGAL+GAIVSEKPNVKW DVAGL+ AK +LKE VI+P +FPQLFTG R P+KGILLYGPPGTGKS+LAKAVATE+D+ FF++SS+DL+SKWQGESE+LVRNLFELARE  RAIIFIDE+DS+CGSRSEGE+DSARR+KTEFLVQM GVGNT   +LVLGATNVPWELD A+RRRFEKR+YIPLPEAEAR  M KLH+GDTPN L ++DF  LG  ++G SGSDI V+ +EALMEPLR+CQ AKQFV    G  M  P +KYP+C  CP KLS        +C  CGA+RM L++++ DKL  P V Y DF KAL  S SSV  +EL RFV+WTK+FGQ+G
Sbjct:   26 TMENKFIPDAIDIVSKAIAADNEGEYEKALSLYRDALSRFTLGLKYEKNEQRKKTILARVEGYLNRAEELRDYLEKQSE----LDKNGGGGTASMKKGDGEEDVDAEK----KKLRGALSGAIVSEKPNVKWDDVAGLDNAKESLKETVIMPTRFPQLFTGTRVPFKGILLYGPPGTGKSFLAKAVATEADSTFFSISSADLISKWQGESERLVRNLFELAREAGRAIIFIDEVDSLCGSRSEGESDSARRVKTEFLVQMDGVGNTGGQVLVLGATNVPWELDAAIRRRFEKRVYIPLPEAEARTFMVKLHIGDTPNNLHEEDFERLGTHTKGASGSDIKVLVKEALMEPLRRCQQAKQFVLDTDG--MYIPCKKYPNCAYCPPKLSGDAANKQYSCNYCGAIRMNLWDIQPDKLKAPPVEYKDFEKALSHSFSSVSPEELKRFVKWTKQFGQDG 470
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: K3X3Z4_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X3Z4_GLOUD)

HSP 1 Score: 551 bits (1421), Expect = 1.460e-186
Identity = 294/468 (62.82%), Postives = 347/468 (74.15%), Query Frame = 2 
Query:   20 MDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFV----PAGPG--GTMLSPAEKYPSCDNCPMKLSS---SGPESANACRKCGAVRMTLYEL-----ETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            M+N+FIP+AIE V  AIN DN + Y+ A  LYKK+LE+FM G+KYE NP ++  IM+RV+GYM RAE L+ +L K  DAK     GG                         KLRG+LA A+VSEKPNVKW  VAGL+ AK ALKEAVILPA+FPQLFTGKR+PWKGILLYGPPGTGKSYLAKAVATE+D+ FFAVSSS LVSKWQGESEKLV+NLF++ARE + +IIFIDEIDS+C +RSEGE+DS RRIK EFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLP+A+AR VM  +HLGDTP+ L D++F  +   +EGCSGSDISV+ REALMEPLRKCQ A+ F      A P   G  L+P E  P C  C MKLSS   + P+    CR+CGA+RM L++L       +KL  P +A +DF K++E S SSV  +EL RFV+WT EFGQEG
Sbjct:    1 MENKFIPQAIEIVTQAINEDNGKNYEEAFRLYKKALEHFMVGVKYEKNPTSREIIMKRVEGYMTRAEQLRTMLHK-TDAKPVSAAGGTAELEKGDKSDDDENDAETT-----KLRGSLASAVVSEKPNVKWDAVAGLDAAKDALKEAVILPARFPQLFTGKRQPWKGILLYGPPGTGKSYLAKAVATEADSTFFAVSSSSLVSKWQGESEKLVKNLFDMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKNEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPDADARKVMLNIHLGDTPHALTDENFTAIAEQTEGCSGSDISVLVREALMEPLRKCQQAQFFTRCDDKAHPARNGQFLTPCEDDPPCAYCHMKLSSCPRNCPDCKAPCRRCGALRMRLFDLPERGFSDEKLRPPMIAMSDFKKSMEHSVSSVAPEELKRFVKWTSEFGQEG 462
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A6V1TB96_HETAK (Vesicle-fusing ATPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TB96_HETAK)

HSP 1 Score: 551 bits (1419), Expect = 2.730e-186
Identity = 308/463 (66.52%), Postives = 359/463 (77.54%), Query Frame = 2 
Query:   23 DNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDIL--AKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGV-------GNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANA-CRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            +N FIPKAIE VK+AI  DNAQ+Y  AL LY ++LEYFM GLKYE N  ++ATIM+RVDGY+KRAE LK+IL    QA A S   +G   XXXXXXXXXXXXXX        ++LRGAL+ AIV+ KPNV+W DVAGL+QAK +LKEAVILP +FPQLF GK  PWKGILLYGPPGTGKSYLAKAVATE+DA FFAVSS+DLVSKWQGES+KLVRNLFELARE   AIIFIDE+DS+C SRSEGEN+SAR+IKTEFLVQM GV       G     +LVLGATNVPWELD A+RRRFEKR+YIPLPE  ARA MF++H+GDTPNTL ++DF  LG  SEG SGSDISV+ REAL EP+RKCQ AKQ++    G  + +P E+YPSCD CP KLSS  P +    C  C AVRM LY++ +DKL VP + + DF KALEK+  SV ++EL  FVEWT+EFGQEG
Sbjct:    3 ENTFIPKAIEIVKEAIEKDNAQEYSEALTLYGRALEYFMTGLKYERNETSRATIMKRVDGYLKRAEQLKEILDGGGQAVAPS---RGXXXXXXXXXXXXXXXXXENADEAEQRRLRGALSDAIVTTKPNVRWEDVAGLDQAKDSLKEAVILPVRFPQLFAGKIEPWKGILLYGPPGTGKSYLAKAVATEADATFFAVSSADLVSKWQGESQKLVRNLFELAREAGNAIIFIDEVDSLCSSRSEGENESARQIKTEFLVQMDGVQASAAREGAGPGRVLVLGATNVPWELDAAIRRRFEKRVYIPLPEGPARARMFQIHIGDTPNTLTEEDFERLGEMSEGYSGSDISVLIREALYEPVRKCQQAKQWLLTPEG--LYTPCEEYPSCDQCPPKLSSDPPGTQYPPCHNCSAVRMNLYDIASDKLKVPILGFGDFQKALEKARPSVAQEELGEFVEWTEEFGQEG 460
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A7S2F1P6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F1P6_9STRA)

HSP 1 Score: 550 bits (1416), Expect = 6.700e-186
Identity = 289/457 (63.24%), Postives = 340/457 (74.40%), Query Frame = 2 
Query:   26 NQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQF-VPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANA----CRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            N FI + I+ V  AI ADNAQ+Y+ AL  Y+KSLEYFM GLK+E NP  K TI++RV+GYMKRAE LK++L   A  K G   GG                         KL G L  AIV+EKPNV+W DVAGL  AK ALKEAVILP +FPQLF GKRRPWKGILLYGPPGTGKSYLAKAVATE+DA FFA+SSSDLVSKWQGESEKLV+ LFELAR  E AIIFIDEIDSMCGSRSEGE++S+RRIKTEFLVQMQGV N  DG+LVLGATNVPWELDPA+RRRFEKRIYIPLP A ARA M +L+LGDTPN+L D +F  +G  ++GCSGSDISV+ REALMEPLR CQ AKQF      G  ML+P  +YPSC  CP+ LS++      A    C +CGA RM LY+++++KL+VP V+   F + L+K+ ++V ++ELT F EWT+EFGQEG
Sbjct:    4 NTFIQQGIQIVTQAIEADNAQEYEKALAAYRKSLEYFMTGLKHEKNPAVKETILKRVEGYMKRAEDLKNVLNDTAPPKRGGSPGGGAASLSKKDGEKDTGQDVEKD----KLAGQLNSAIVTEKPNVQWDDVAGLIAAKDALKEAVILPRRFPQLFVGKRRPWKGILLYGPPGTGKSYLAKAVATEADAKFFAISSSDLVSKWQGESEKLVKTLFELARAEEHAIIFIDEIDSMCGSRSEGESESSRRIKTEFLVQMQGVSNVMDGLLVLGATNVPWELDPAIRRRFEKRIYIPLPCASARAYMARLNLGDTPNSLVDANFEVIGEQTDGCSGSDISVVVREALMEPLRVCQHAKQFREEIVDGKDMLTPCIEYPSCPWCPINLSTNSAAEKRAAEQRCPRCGAARMNLYDVDSEKLLVPTVSMEMFSRVLDKARATVAQEELTHFEEWTEEFGQEG 456
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A024TRV6_9STRA (Uncharacterized protein n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRV6_9STRA)

HSP 1 Score: 549 bits (1415), Expect = 1.090e-185
Identity = 307/469 (65.46%), Postives = 356/469 (75.91%), Query Frame = 2 
Query:   20 MDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFV----PAGP--GGTMLSPAEKYPSCDNCPMKLSSSGPESANACR----KCGAVRMTLYEL-----ETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            MDN+FIP+AI+ V  AI  D  + Y+ A  LYK+SLE+FM G+KYE NP +K  IM+RV+GYM RAE L+++L  QA  K     G A          XXXXXXXXXXX   KLRGALA A+VSEKPNVKW DVAGLE AK ALKEAVILPA+FPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATE+D+ FF+VSSSDLVSKWQGESE+LV+NLFE+ARE + +IIFIDEIDS+C +RSEGE+DS RRIKTEFLVQMQGVG++HDGILVLGATNVPWELDPAMRRRFEKRIYIPLPE EAR VM K+HLGDTP++L D DF  L   +EGCSGSDISV+ REALMEPLR+CQ A+ F      A P   GT L+P E  P C +C MKLSS  P +   C+    +CG+ RM LY+L        +L  P V+  +F K LE S SSV  +EL +FV+WT EFGQEG
Sbjct:    1 MDNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMTRAEQLREMLEGQAKPKVVAAGGTA--------EKXXXXXXXXXXXEKNKLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVKNLFEMAREKKPSIIFIDEIDSLCSNRSEGESDSTRRIKTEFLVQMQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLNDDDFTTLATKAEGCSGSDISVLVREALMEPLRQCQQAQFFCRCDDKARPTRNGTFLTPCEDDPPCPHCHMKLSSC-PSNCTGCKTPCQRCGSYRMRLYDLPDRGFNDSQLKPPMVSMTNFNKVLEHSISSVAPEELHQFVKWTSEFGQEG 460
[Close]
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Match: A0A7S0PTQ8_9STRA (Vesicle-fusing ATPase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PTQ8_9STRA)

HSP 1 Score: 545 bits (1404), Expect = 5.900e-184
Identity = 299/462 (64.72%), Postives = 350/462 (75.76%), Query Frame = 2 
Query:    2 CISTETMDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQAKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGXXXXXXXXXXXXXXXXXXXXXXKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVILPAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSDLVSKWQGESEKLVRNLFELAREHE--RAIIFIDEIDSMCGSRSEGENDSARRIKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEAEARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPLRKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANACRKCGAVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEFGQEG 1381
            C     M+N+FIP AI+ V  AI ADN  +Y+ AL LY+ +L  F  GLKYE N   K  +++RV+GYMKRAE L+D L KQA+      +GG G  XXXXXXXXXXXXXX       KLRGAL+GAIV+EKPNVKWSDVAGL  AK +LKE VI+P +FPQLFTGKRRP+KGILLYGPPGTGKSYLAKAVATE+D+ FF+VSSSDLVSKWQGESE+LVRNLFELARE    +AIIFIDE+DS+CGSR+EGE+DSARRIKTEFLVQM GVG    G+LVLGATNVPWELD A+RRRFEKR+YIPLPE EARA M KLHLGDTPN L + D+  LG  +EG SGSDI V+ +EAL+EPLR+CQ AKQF     G   L P   YP+C  CP KL+S  P     C+KCGA+RM L+++  DKL  PDVA+ DF  AL  S  +V  +EL RFV+WTK+FG EG
Sbjct:   11 CYPRHAMENKFIPDAIDIVSKAIEADNEGEYEKALSLYRDALGRFTLGLKYEKNEARKKLVIERVEGYMKRAEELRDHLNKQAELDKDGGKGGTGMKXXXXXXXXXXXXXXA------KLRGALSGAIVTEKPNVKWSDVAGLTSAKESLKETVIMPTRFPQLFTGKRRPFKGILLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWQGESERLVRNLFELARESPGGKAIIFIDEVDSLCGSRTEGESDSARRIKTEFLVQMDGVGKNEGGVLVLGATNVPWELDAAIRRRFEKRVYIPLPEKEARAYMVKLHLGDTPNELTENDYDRLGEVTEGASGSDIKVLVKEALLEPLRRCQRAKQFYYTPDG--FLMPCITYPNCAYCPPKLNSDKPGKDYTCKKCGAIRMELWDVPPDKLKAPDVAFHDFESALGHSIVTVSPEELQRFVDWTKQFGSEG 464
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CL36_9STRA4.500e-22375.60Katanin like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A6H5L4E7_9PHAE8.150e-19683.67AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2HM33_9STRA5.490e-19067.62Vesicle-fusing ATPase n=1 Tax=Helicotheca tamesis ... [more]
A0A7S3K4J8_9STRA3.620e-18963.85Vesicle-fusing ATPase n=1 Tax=Aureoumbra lagunensi... [more]
A0A7S1YIP4_9STRA1.000e-18662.42Vesicle-fusing ATPase n=1 Tax=Grammatophora oceani... [more]
K3X3Z4_GLOUD1.460e-18662.82Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A6V1TB96_HETAK2.730e-18666.52Vesicle-fusing ATPase n=1 Tax=Heterosigma akashiwo... [more]
A0A7S2F1P6_9STRA6.700e-18663.24Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A024TRV6_9STRA1.090e-18565.46Uncharacterized protein n=12 Tax=Saprolegniaceae T... [more]
A0A7S0PTQ8_9STRA5.900e-18464.72Vesicle-fusing ATPase n=1 Tax=Asterionellopsis gla... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1022273..1035836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score684.5
Seed ortholog evalue3.4e-194
Seed eggNOG ortholog2880.D7FR02
Preferred nameVPS4B
KEGG koko:K12196
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
GOsGO:0000070,GO:0000075,GO:0000166,GO:0000278,GO:0000280,GO:0000323,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000916,GO:0000920,GO:0000922,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0002790,GO:0003002,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005771,GO:0005773,GO:0005774,GO:0005783,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0006508,GO:0006511,GO:0006605,GO:0006622,GO:0006623,GO:0006629,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006869,GO:0006886,GO:0006900,GO:0006906,GO:0006914,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007032,GO:0007033,GO:0007034,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007163,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007423,GO:0007610,GO:0007638,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008333,GO:0008593,GO:0009056,GO:0009057,GO:0009306,GO:0009405,GO:0009506,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009838,GO:0009887,GO:0009888,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010026,GO:0010033,GO:0010035,GO:0010038,GO:0010090,GO:0010091,GO:0010226,GO:0010256,GO:0010389,GO:0010564,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010824,GO:0010825,GO:0010876,GO:0010941,GO:0010948,GO:0010971,GO:0010972,GO:0012505,GO:0015031,GO:0015630,GO:0015672,GO:0015833,GO:0015850,GO:0015918,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016125,GO:0016192,GO:0016197,GO:0016236,GO:0016322,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0017157,GO:0019058,GO:0019068,GO:0019076,GO:0019538,GO:0019899,GO:0019904,GO:0019941,GO:0021700,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030029,GO:0030036,GO:0030054,GO:0030154,GO:0030163,GO:0030182,GO:0030301,GO:0030447,GO:0030448,GO:0030496,GO:0030554,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031267,GO:0031410,GO:0031468,GO:0031982,GO:0032365,GO:0032366,GO:0032367,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032506,GO:0032507,GO:0032509,GO:0032510,GO:0032511,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032886,GO:0032940,GO:0032984,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033993,GO:0034058,GO:0034067,GO:0034613,GO:0035088,GO:0035418,GO:0035639,GO:0035890,GO:0035891,GO:0036094,GO:0036213,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042051,GO:0042058,GO:0042221,GO:0042461,GO:0042462,GO:0042551,GO:0042592,GO:0042623,GO:0042802,GO:0042803,GO:0042886,GO:0043162,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043328,GO:0043624,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044837,GO:0044878,GO:0045053,GO:0045184,GO:0045185,GO:0045197,GO:0045324,GO:0045463,GO:0045465,GO:0045470,GO:0045742,GO:0045746,GO:0045786,GO:0045787,GO:0045920,GO:0045921,GO:0045926,GO:0045930,GO:0045931,GO:0046530,GO:0046599,GO:0046601,GO:0046605,GO:0046607,GO:0046755,GO:0046903,GO:0046907,GO:0046983,GO:0048284,GO:0048285,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0048878,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051259,GO:0051260,GO:0051261,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051493,GO:0051495,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051651,GO:0051656,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0052126,GO:0052192,GO:0055044,GO:0055065,GO:0055067,GO:0055075,GO:0055078,GO:0055080,GO:0060236,GO:0060341,GO:0060548,GO:0060627,GO:0061024,GO:0061025,GO:0061245,GO:0061462,GO:0061640,GO:0061738,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070507,GO:0070676,GO:0070727,GO:0070887,GO:0070925,GO:0071241,GO:0071248,GO:0071285,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072319,GO:0072594,GO:0072657,GO:0072665,GO:0072666,GO:0090068,GO:0090169,GO:0090174,GO:0090224,GO:0090543,GO:0090558,GO:0090596,GO:0090611,GO:0090626,GO:0097159,GO:0097352,GO:0097367,GO:0097708,GO:0098588,GO:0098771,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:1901184,GO:1901186,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901615,GO:1901673,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902115,GO:1902117,GO:1902186,GO:1902188,GO:1902494,GO:1902749,GO:1902750,GO:1902751,GO:1903047,GO:1903076,GO:1903530,GO:1903531,GO:1903532,GO:1903539,GO:1903541,GO:1903542,GO:1903543,GO:1903722,GO:1903724,GO:1903772,GO:1903774,GO:1903827,GO:1903900,GO:1903902,GO:1904375,GO:1904896,GO:1904903,GO:1904949,GO:1905475,GO:1990621,GO:1990778
EggNOG free text desc.positive regulation of centriole elongation
EggNOG OGsKOG0739@1,KOG0739@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative; katanin like protein
Ec32 orthologEc-09_003060.1
Exons8
Model size2562
Cds size1365
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20521.1prot_S-ischiensis_contig9.20521.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 1022292..1034658 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817382.6908755-UTR-S-ischiensis_contig9:1022272..10222911622817382.6908755-UTR-S-ischiensis_contig9:1022272..1022291Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1022273..1022291 +
1695741071.6348066-UTR-S-ischiensis_contig9:1022272..10222911695741071.6348066-UTR-S-ischiensis_contig9:1022272..1022291Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1022273..1022291 +
1622817382.791842-UTR-S-ischiensis_contig9:1034658..10358361622817382.791842-UTR-S-ischiensis_contig9:1034658..1035836Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1034659..1035836 +
1695741071.7588458-UTR-S-ischiensis_contig9:1034658..10358361695741071.7588458-UTR-S-ischiensis_contig9:1034658..1035836Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1034659..1035836 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817382.7043774-CDS-S-ischiensis_contig9:1022291..10225661622817382.7043774-CDS-S-ischiensis_contig9:1022291..1022566Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1022292..1022566 +
1695741071.654765-CDS-S-ischiensis_contig9:1022291..10225661695741071.654765-CDS-S-ischiensis_contig9:1022291..1022566Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1022292..1022566 +
1622817382.715968-CDS-S-ischiensis_contig9:1024413..10246371622817382.715968-CDS-S-ischiensis_contig9:1024413..1024637Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1024414..1024637 +
1695741071.6647005-CDS-S-ischiensis_contig9:1024413..10246371695741071.6647005-CDS-S-ischiensis_contig9:1024413..1024637Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1024414..1024637 +
1622817382.726985-CDS-S-ischiensis_contig9:1026538..10266421622817382.726985-CDS-S-ischiensis_contig9:1026538..1026642Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1026539..1026642 +
1695741071.6747944-CDS-S-ischiensis_contig9:1026538..10266421695741071.6747944-CDS-S-ischiensis_contig9:1026538..1026642Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1026539..1026642 +
1622817382.737107-CDS-S-ischiensis_contig9:1028284..10284981622817382.737107-CDS-S-ischiensis_contig9:1028284..1028498Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1028285..1028498 +
1695741071.6923954-CDS-S-ischiensis_contig9:1028284..10284981695741071.6923954-CDS-S-ischiensis_contig9:1028284..1028498Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1028285..1028498 +
1622817382.747376-CDS-S-ischiensis_contig9:1029730..10298761622817382.747376-CDS-S-ischiensis_contig9:1029730..1029876Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1029731..1029876 +
1695741071.7123005-CDS-S-ischiensis_contig9:1029730..10298761695741071.7123005-CDS-S-ischiensis_contig9:1029730..1029876Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1029731..1029876 +
1622817382.7575064-CDS-S-ischiensis_contig9:1031567..10316661622817382.7575064-CDS-S-ischiensis_contig9:1031567..1031666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1031568..1031666 +
1695741071.7263331-CDS-S-ischiensis_contig9:1031567..10316661695741071.7263331-CDS-S-ischiensis_contig9:1031567..1031666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1031568..1031666 +
1622817382.768009-CDS-S-ischiensis_contig9:1033394..10335561622817382.768009-CDS-S-ischiensis_contig9:1033394..1033556Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1033395..1033556 +
1695741071.7373528-CDS-S-ischiensis_contig9:1033394..10335561695741071.7373528-CDS-S-ischiensis_contig9:1033394..1033556Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1033395..1033556 +
1622817382.7794533-CDS-S-ischiensis_contig9:1034517..10346581622817382.7794533-CDS-S-ischiensis_contig9:1034517..1034658Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1034518..1034658 +
1695741071.7489698-CDS-S-ischiensis_contig9:1034517..10346581695741071.7489698-CDS-S-ischiensis_contig9:1034517..1034658Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1034518..1034658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20521.1

>prot_S-ischiensis_contig9.20521.1 ID=prot_S-ischiensis_contig9.20521.1|Name=mRNA_S-ischiensis_contig9.20521.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=455bp
MDNQFIPKAIETVKDAINADNAQQYDIALGLYKKSLEYFMAGLKYENNPQ
AKATIMQRVDGYMKRAETLKDILAKQADAKSGMDQGGAGGTGGAATASAD
DQKNGGGDDEQKKLRGALAGAIVSEKPNVKWSDVAGLEQAKSALKEAVIL
PAKFPQLFTGKRRPWKGILLYGPPGTGKSYLAKAVATESDAVFFAVSSSD
LVSKWQGESEKLVRNLFELAREHERAIIFIDEIDSMCGSRSEGENDSARR
IKTEFLVQMQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEA
EARAVMFKLHLGDTPNTLKDQDFAGLGGASEGCSGSDISVITREALMEPL
RKCQMAKQFVPAGPGGTMLSPAEKYPSCDNCPMKLSSSGPESANACRKCG
AVRMTLYELETDKLMVPDVAYADFIKALEKSGSSVGEDELTRFVEWTKEF
GQEG*
back to top

mRNA from alignment at S-ischiensis_contig9:1022273..1035836+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20521.1 ID=mRNA_S-ischiensis_contig9.20521.1|Name=mRNA_S-ischiensis_contig9.20521.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13564bp|location=Sequence derived from alignment at S-ischiensis_contig9:1022273..1035836+ (Schizocladia ischiensis KU_0333)
TTGCATCAGCACCGAAACCATGGACAACCAATTCATACCGAAAGCCATCG
AGACCGTCAAGGATGCCATCAACGCGGACAATGCCCAGCAATACGACATT
GCACTGGGCCTCTACAAGAAGTCCCTCGAGTACTTCATGGCCGGGCTCAA
GTACGAGAACAACCCGCAGGCGAAGGCAACGATCATGCAGCGCGTCGACG
GCTATATGAAGCGCGCCGAGACGCTCAAGGACATCCTTGCCAAGCAGGCG
GATGCAAAGTCCGGGATGGACCAGGGCGGGGCTGGGGGTACAGGGTGAGT
TGATATTCTGTCTACGGCATGGTCGGCGTTGCCGCATTCCTGGAAATGTG
TAGCTGAGGGTCCTCCCACGTGTTGCACTGGTCACGGCCCCTGGTACTCT
CATGGTCTGTACGTACTGCGCCGTCACGGTTGGAGTCCATCATTGCACGT
GCAAAGTCGCGGGGGCTCAAGTTTGTACTCGTACAAGTTGTACGAGTACG
GATGCGGCAACGTCCCGCAGACGAAGTGACGGCGACAGCGCTCGAAGGGA
ATCTGTTGTTTTGCTTGTTCAAGAGCCAGAAATGTCGTTTCGCGTGCCCA
AACGCCTACGTCCCGGCTCGAGAAACGCAAACGAGCCATAGCAACTGCAG
GTGGGTCCGACTTTCCGCGGTGCATTTGTACTTCTTGTAAGCATAGTTGG
GCCATTCGTCACGAATGGGGGGTACCTAACCGGTAACCACGGCCCTCGCG
ACCTAACCGGCACCATTCGTCGTATTCGTCGGCCTCGGGAGAGCAGACCG
TTACAGGCGGTTTCACGTGCACGCCTTCCATGGCCTGCAGTCGCGGGTTT
GAACGAGCCCAACGCGAGTCCTGGCGGCGCCCGCCTTCCATGTAAGGTCC
GATATGACCGGGGGCGAGGGGAAAGGTGACGGGCCACATGACCAGAAATA
GATACTCTGAGTGTGCCGGGTGCCCGGGTGGGCGTGCGATGAAAGGCGGT
GCCCCACCAGGTGGCTGCAGGCCATCAGGGGCTCCCCGACCGTGATCCCC
GCTTTCGGGAAAGCGGGATTGGGACCAATGGCTGCCACGAATATTGCCGA
ATCTCGCGAAAAATTCGCCGTACGCACATGGGGAAACCTGACCGTCATTC
CAGCCGTATGCCGCACGGACCAACGATGCAAGTTGTAAGGGGCTCTGACT
GTTCTTCCGGCCAGAGCGAGGCACTCCCCCCAGCAGCGCCGGCATGTTGT
AGATCAGCCTCATGTCGGGATTGGTTTGCCCCAGCGACCGACCGCCGCCC
GTTTTTTTTATGGCGCAAGGAGGGGTCCTGCTCGGTCTCGACCGAGGCGC
GTGGTCAATGGTCTCAGGACTGCGGCAAGCACCACGTGAGTATACATATA
TATGTACTCATTGGCTTGTCGTTCGACATAACCTTGCGCGCAATGCCGAC
AGCCCTAAGTCGAAACTTCGGGTTTGCCCTCCGATGCTACATACATATAT
ACTACGTAGTATATAATTCATACAACTGAGAATCACGACATGGCAGGCGG
TGCCTCACACCCCCTCGAAGGGGGCCGTTTCTCCTCCACGCCACTTTAAA
GAGTACTTCGAAGTACTGGAGTCCGCACTCTTTTTTCGGCCTTTGCGACG
CGCGGTACGCTACTTCCTCCCTCTCCAAAGCCTTTTTCAAGCACCCCTTC
TTGTGTTTGCTGCGATGCACTAGTAGTAGTAGATTGCACTGCCTTGCCGT
GGTTGACATGCTAGTACTACAGTAGTACTTCGAAGTACAAGGTTGCCCCA
CGGGCACTAGCGCTCACGTGCGCACACACACATGCATACACACACACAAC
ATAAACAACACCGCACTAGCAGATTGCACTTGCTTTACCATGATTGACCT
GCTAAGGTTGCCTCATGGGCACACACACACACACACACACACACTGGCAA
GAATCTCTCCTTTATGAAATTTTTCTTAGGCTGTGGAAGTCTACCACTTT
GATAGGAGGGACGTGTAAGAGCTGTAAGGCTTTCAGCTGACCCTGGTTAC
AATACACAATGGAAACAAACCGCATGGTTTTTCGTAAAATTACTGAAGCA
ACCGCACACACGCGACACACACGACACAAAAACAACGCCAGGGGCGCCGC
CACGGCGTCGGCGGACGACCAGAAGAACGGCGGGGGGGACGACGAGCAGA
AAAAGCTAAGGGGGGCGCTGGCCGGCGCCATCGTGTCCGAGAAGCCCAAC
GTGAAGTGGAGCGACGTGGCGGGTCTGGAGCAGGCCAAGTCGGCGCTGAA
GGAGGCGGTCATCCTGCCCGCAAAGTTCCCGCAGCTCTTCACGGGGAAGC
GGCGGCCTTGGAAGGGTGAGGAACAGTGATGGAATGTCTAGGCAAACTAA
CCTATTCATCAACAGTGCTGATCTCTATATCTATCGATAGTCGATATTCG
ATAGTTTGAAGCGGCGGCCTGGAAGGGTGAGGAAGGAGGAGAGAGGGCGT
GGGTCAGTGATGGGATATCGATCAGTAGATACTGGTAGCTCGACTGATTT
TGTGGGCGGCATCACTGTCTAGTCTTGGATTTAGTGTGGGTCAAACTACC
GAATGTCTACTATCGATAGATATATACAGTAGATCAGTACAGTCAATAAA
TAGATTGATGTGCTTAGATATTCCTCTGGAGCAGGCCAAGTCGGCGCTCA
AGGAGGCGGTGATCCTGCCCACAAAGTTCCCGCAGCTCTTCACGGGGAAG
CGGCGGCCTTGGAAGGGTGAGGAAGGAGAAGGGAGGGCGTGGGACCTCAG
TGATGGATTATCGATCAGCAGATAGTTATCGGGCTCGACTGATTTGTGGG
CGGCGTTACTACTGTGGCTACGGGGATGGATGGCGCCCTGAACTCGCGTA
AGTAGGAACACCTCCTCTTTCCCACTCGCTGTTTATCTTCTTGCAAAAAA
CTACTTTTTGAACTTGGATTTAGTGTGGGTCAAACTATCGAATGTCGACT
GTCGATAGATATACAGATCCGTACTGTCGATGAATAGATTGATTTGCTTA
GATATTCCATGACTGGCGTGGGTTTGGGCGGCGGGCGGAGGTCTGGACGT
TGGTGGGCCGGGGGGGGCACGGGGGGAGGGAGGGAGGCAATTGGTCGGAG
GGACAAAGCTTCTCGCATTAAGTGCAATATTGGCTCAACACCAACAAGTG
CATGCGCTATGGATATCAGATCTCCCAGAGCAGGAAAGTAACCTTGGAAC
ACTTGCCTCGAGGATTTCGCGGCATGGGGGAAGGGGTGCGAGGCTTTGGG
TCCCAGGGGGGAGGGCTGGATGTCGATTTATCGGGCAGGGAGGCACACTT
CATGACTGGTTGTGTGTCTACTTGTCCGCCTGTCGCTTGGTCGGCTCTTG
TGCGCCGGTGCCTCTCAGTGTCTGTCTCTTTATGTATACTCCGTATATAC
TTCAAAGTATACGCCTGTCTGCGTGTCTGCGTTTCGAGCCGTGCTTCGGT
CGGTGTCCTCTATCCGTCCCCGTCCCTCTCTCTCTATATATATATGTGTA
CACTTATATATACTTGAAGTATTCGCCTGTCTGCGTGTCTGTCTTTCGAG
CTGTGCTTCGGTCGGTGTCCTCTATCCATGTCCGCCTCTCTCTGTCTGTC
TGTCTCTCTCTCTCTCTTCCTCACCCGACTCCGTCCGTCTCTCCTTGCAC
CATAGCTCGCGCTCAACACCCTCGCTCCCCGTTCTGCACCCGGACCCCCC
CCCCCCTCCCCTTCTCTCTGCATCTGTCACTGTGGCAACCGCCCTTGGCC
CTGGTGGCTGTGCGACGATGACGGCCATACCGGTGCCTTGGGTGGCGACG
AAACCAATGGCCCGGGATGTGGTCATGGCGGCGACGGCGGCGGCGGCCGC
GGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCGGCGGTGGTGGTGG
TGGTGGCGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGCGGCGGTGGTG
GTGGTGGTTGTGGTGGTGGTGTTGGTGGTGGTTGTTGTGGTGGTGGTGTT
GGTGGTCTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGCTACTGCTGGTGTTGGTGCCGGCTGTGCGGCGGCTGCTTGGACTCTGG
TGGGGGCTGTTGTGGGTGTTGACTTGCACTGGATTCTGCGGCGCCGGCTG
GTGTGCGGGCGATTGGGTGGGGGGTGGGGTGGATGGGTGGGTTGTGGTTT
TGATGGTGGAGGGCAGGTATCCTGCTGTACGGCCCCCCCGGTACGGGCAA
GTCCTACCTTGCGAAGGCGGTGGCGACGGAGTCCGACGCCGTGTTCTTCG
CGGTGTCTTCCTCCGACCTGGTGAGTGCAGTTACAAGTTGACGAGTGTGC
CGCGCTGTGCTGTACTGTGCTGCGCTGTACTGCGCTGCGCTGTGCCGCTG
TACTTTTCCGTACTGTATTGTGCTGTGCTGTACTGCACTGCACTGTGCTG
TGGTAGTCCCGAGACCATTGACCACACGCCTCGGTCGAGACGGAGCAGGA
CCCCTCCCTCCCATGGCAGAGCCGGGGTGGGAGTACCATGTACTTCAAAG
TACTGAGTGATTAGCCTGTGTTTGTGTATGCATTGGCCCCTCATCCGGCT
TGCCGATACCAAGGCATGATGGCCTCATCGGGCTTGGCCAGTGCACGGCC
TGGCCGGTGCAAACCCGGCATGCTCCGTCCCGGCCTAGTTGGGACGCGAG
AGTCCACGGCTATATAGCTACTCCTGCCGGAGGGCAAACCCGAAGTTTCG
ACTTAGGGCTGTCGGCATTGCACGCAAGGTTGTGTCGCAAGACAAACCAA
TGAGTACATATATGTATATTGGCCGACAACCGCCTGGTATGGCCAGCGAG
GCTTTTCCTGAGTAGGGCACTCGACTGTATACGAAGAGTGCGCGGCGGTA
CGAGTACCTCCCTAGGTACTTCTAAGTACGTTTTTGATTGAACCTCGCTC
AGCCCAGCTTTGCAGAGTGGCGTGTGTGCTACTACAGTATGAGCCCCCTC
CGCTGGCGAAGAGCTAAGGAAGGGCCGCTGTTGCGGTCTACAGTGACGTG
GCTTTTCCTGTCCCTCAGTACCACTGTACAATTCCTCCCCGTCCACCTCC
CCCTCCTCCTCTTCTCCACTTCCCCACACAACTTTCCCCTGGCGAGCTAT
AAGGGCGGGCCACTGCTGAGGTCTCTAGTGACGTGGCCCGCACCTCGCCC
CGTGTTGTTCCTGTCAGTACTGTCCTCTGCAATTGCAGCGCCTATCGCGC
GCTGCATGCGGAGGTTTGCTGCCGCGTACAGCACAGTACCACGCAGTAGG
CTGCAGGCTGCACGGTACAGCAGTGCAGTAGCGCTTCGAAGTGTGTCTGA
AAGCACGAGCTGCGCTATACTTGCAAGGCGTGCGGTGAGCTCTGCTAGGT
GAGGACCGCGGGTGCCGCTGCGATATCAAACTGGCGTGCCGTACAGGGTG
TTGAGAGCACGCGTCCCACACCGGTCCACGCCGTACGTCTCTACTCGAGT
GTATATAGAGATGTAGCTCTACTCACGTTGTGCTTGCAATAGTCCCGAGA
CCATTGACCACGCGCCTCTGATGATGAGGATGGTGCAAACAATGATGATA
ACACACAAGTACACGTACATGACTTGGGGGGGGGAAACACTGTCCGAAAC
AGGTGAGCAAATGGCAGGGCGAGTCCAAGAAGCTGGTGCGAAACCTTTGA
TAGTGATGAGGATATTGATGAGAATGACGACGAGGATGGTGGAAACAAAT
TATGATACTTCGAAGTAACACACAAGTACGTGGCGGAGCGGGGGGGGAGC
AGGTGAGCAAATGGCAGGGCGAGTCTGAGAAGCTGGTCCGGAACCTCTTT
GAGCTAGAGCATTGGCCATTGATAGTGATGAGAGTACTGATGATGTGAAT
GATGACGAGGATGGTGGTGGTGCAATGCTGACAACACACAAGTACACGTC
CGTGATGAGCAGGTGAGCAAATGGCAGGGCGAGTCCGAGAAGCTGGTGCG
AAACCTCTTTGAGCTGGCCCGCGAGCACGAGCGGGCCATAATCTTCATCG
ACGAGATCGACTCCATGTGCGGCAGCCGCTCCGAGGGGGAGAACGACTCC
GCCCGCCGCATCAAGACCGAGTTCCTGGTGCAGATGCAGGGCGTGGGGAA
CACGCACGACGGCATCCTCGTGCTGGGTGAGGGGGGGGGGGGGGGGGGGG
TCGTCTACAACGACAGTGATGGAAGTAGGAATGGTGCAGGTGCAGGGCGT
GGGGAACACGCACGACGGCATCCTCGTGCTGGGTGAGGGGGCGAGGGAGA
GGCTGGGGGCGGGTGTGTGTGTGTGCTTGTCTACCAACAGTACTGGAAGT
TGGAAGTAGGAAGTGGTTCAAATTACTTCTACGTCACCTTAGGGTTAGTG
TAGATGCAGGGCATGGGGAACACGCACGACGGCATCCTCGTGAGGGGGAA
AGGGAGAGGGTGGGGGGGGGGGGTGCTTGTCTGCAACAGTACTGGAAGTA
GGAAGTGGTTCGACTTACTTGTACATCACCCTACGTTGTGCTTTGTATGT
GTGAGGGGGGAAGCGAGAGGCTGGGGGGGGGGGTGCTTGTCTACAACAAC
AGCTGGAAGTTGGAAGTAGGAAGTGGTTCGAAGTTGCGCACGCCGCCCGT
CGCAGCTCTCACAGTCGCTTTTCAATATACTGCACGTGTATTGTACATCA
CCCTACGTTGTGCTTTGAACTGTCTACAACAACAGTGCTGGAAGTTGGAA
GTAGGAAGTGGTTAGAAGTACGACTTTTTGTACGTCACCCTGCATTGTGC
TTTGTATGTACAGTCTGCCACGCAGCGCTTGGAAGTATACTGCAGTAAGT
ACGGAATGAGTGTACTGCGCGCAAAGAAGGAAAGGGAGAGAGAGAGAGAG
AGAGAGGAGAGGCCGGGGGAGGTGCAGTGTATTGTAGGCCCGGGGGGGCG
GGGGGGGGGTACAAGTAGCGTACGGAACCCGTTCGAACGTGTACTTCGTA
GGGGTCCCTGTTGAGGAAATGCTTGTTGTCAAGGTAGTAGTAGTGTACTC
ATACAGGGTTCCAGGATCAAGTTTTGCCCTCAGAGGACGGCTGTACTAGT
AACCATGGTACAAAAGTGCGATTTTTTTTGCCCAAATAGTTTTATCGAGT
ATCGATTGACCTGTTGCTCGGTCCATGTGATGTTGTGATGTGAAAACTAT
TGCGCAAATGAACCTACTCGAGCTCTTTCATGCGTCAAAATTTCACGGTC
ATCGATGCGTCCTTCATAGGGCGGCCCGGGCACCAAAAGTAGCAATCGCA
ATTTTGTACCATTGTTAAGTGCTATCATCCCGCCCCCAGATCCGACTCCG
CCTCTCCCCTCCCCCCCGCGTGCCGCCACCGCCGCCGCCGCCGCCGCCCC
GGATCCAGGGGCGACAAACGTGCCCTGGGAGCTGGACCCGGCGATGCGCC
GGCGGTTTGAGAAGCGCATCTACATCCCCCTGCCAGAGGCGGAGGCGAGG
GCTGTGATGTTCAAGCTGCATCTGGGGGACACGCCCAATACCCTCAAGGA
TCAGGTGAGCTGCGTGGTGGTACTGTAGTAGTTCAAAGTACTTAGTGAAC
AGTTGTACTCACGTACTATAGTAGTGCTTATAGTAGTACTCGTACGAGTA
CTGTAGTAGTGCTTGTGAGGTGGAGGCGAGGGCTGTGATGATCAAGCTGC
ATCTGTGGGGACACGCTCAACGCCCTCAATGATGAGGTGAGCTGCGTGGT
AGTAGTTTTAAGTACTGTAGTGCTTATAGTAGTAGTAGTACTAGTACTAG
GAGTATTAGTAGTAGTACTGTAGTAGTAGTAGTATAGTAGTAGTAGTAGT
AGTACTAGTACTGTACAGTAGTAGTAGTGGTAGCAGTGGGAGGGGTAGTA
CTGGTAAGTAGAGGTACTCCCCCTCCCACTGCCCCTTCTCACCCTCTCCC
ATTGGCTCCCGTAGTGTTGGAGAGATCTTGCCCCCCCGTGCCAATTTTTG
TGAGAACTTTTCTCGCCGAATACCGGTCGGATTCGCGCGGGAAAACTCGG
AAAATCACCCTCAGGACTTGGGGGAACTTTTCCAAGCACTTTTGGGACAA
TCTAGGACCTTTTTGGCGAGAAACATCCCCCCCGACAATTGTCCCATGGG
AGCAAAATCTCTCCGACGATTACGGTACTTGCCCTACTCGCTCCCCTCCT
ACTGGCCACTGCTCCAAGCCGCGCCTCTTCCATTGGCCACTGCCCCTCTC
GCCCCTCTCATATTGGCCGCTTCCAGCCCTCACCCCCCTCTGATTGGCCA
GTACCCCTCTCACTCCCCTCTCATTAGCCGCTACCCCTCCTCACCCTCTC
CCGTTGGCTACTTCCCCTTCTCGCTCCCCTCTACTGGCCACTGCTCCAAG
CCACGCCTTTTCCATTGGCCGCCGCCCCTCCCGCCCCTCTCGTATTGGCC
GCTTCCCACCCTCACCCCCCTCTGATTCGCCAATAGCCCTCCTCACCTCC
CCCATTCGCCGCTTCCCTCTCTCAGTCTGCTGTGGTTGGCCGCAGCCTCT
TGGTACCCCTCCCCTATTGGGGCTCCCTCCTCTCTCTCCGCTCTCTCGTT
GGCTGGTCCTCCTCACCCCCTTCCTATTTCGGGCCTCCCTGCCCAAGAAT
TAAAAAATAGCCAGTTCAAGCCCAAATCTAAGCCCCTCTTCCTCCCGTCC
TATGGGCCTTTGCCCCTCCCCAATCCTCTCCCATTGTGGCCGCTTCCCAC
CCTCGCCCCCCTACTATGGTGTGGGTACAGTCAGTCGACATAGTTAAAAC
ACGTTTTTCCCGATAACAGGCGGACCGTCGCCGACCGTTTTCGACAGCAT
GGTGCTGAGGAGATGAGGTTGTCTTGCCCGTGCCCCCGGCTCATGCCATG
CCGATTTGCAGCGCGATCGGGGCAGAAGTTCAGCCGTTGTTGATATCCAC
AAATCCGCAAATCACTTTTTAACTAGTTCGCTTGACTGTCGGTAGTTCCA
TACCTACAGTTTCATTTGTGCGGTGCGTGCTCAGTTTAAACCACACCGAT
CATTGCGTCGGGTAATGATAATACAGCCCTCGCCCCCCTCTAACTGGCCA
CTGCCCCTCCTCACCCCCCTCTTGCTGGAAATGACTTTTCTGGACATTTT
TTTCTGATTTTGATCCTCTCCCATTGTGGCCGCTTCCCACCCTCGCCCCT
CTCTAACTGGCCGCTGCCCCTCCTGGCCCCTCTGTTGTTGGAAAGGACTT
TGCTGGACTGGGCGGGGCCAGCGAAGGGTGCTCTGGGTCGGACATATCGG
TGATAACGCGCGAGGCTCTTATGGAGCCCCTCCGCAAGTGTCAGGTACGC
CGACTTTGTATAGCGTTGGCAATTAACCCTTTTGCCCCTGGTAAGTTGGA
CTTATACACTAAAAACATATGATTTTACGGACCCCAGGGGTAAAAGGCTT
AAGGCTCGAAGAAAGCCGCATTCCTTATGGAGCCCCTCCGCAAGCGTCAG
GTGATTCATATAGATTGTAACAAGGTACAATTGCACGTGTGTGAGATTGA
GTGTTCTCGTATTATTAGTTGTCCCATTTAAGAATCGAGCGTGCTCGTGT
TAGTGAGTGGCACATCCAGGAACTATGAACAAGGGAGGGGGGGGGCAAGT
GTCACGTACGCCGACTTTGTACAGCGTTTGGACATTAGCCCTTCTACCCC
TGGGGTCCGTGTGACCATGGGGTTTTAGTGTGTAAGTCCAATTTACCACG
GGTAAAAGGGTTAACATCGCCGGTTAACACTTTCACTGCTGGGGTCCGTA
TAATCATAGGGCTCTAGTGTGTACTTCCAGTTAAGCAGGCGTAAAAGGGC
TAAGGCTGGAAGAAAGGCCGCGTTCACCTTTTGTGTGGAAAGATCACGCG
AGGCGCTTGTGGAGCCCCTCCGCAAGTGTCAGGTACGCCGAATTTGTATG
AGTACAGCGTTTGGAAATTAAGTGAGGCTCGAAGAAAGGCCACGTCCACC
TTTTGTTCTAAGAGCGTGCGCCTACTACAGTGAATAGTACGACGGGACAG
TTAAAGACGATACGAGCAGGCAGGTAGACAGGCCGGCAGACATTTGCAGC
CCAATGGGGCCACGTGATTGATGTGATGTCAAGCTTCTGTACGTTAAAGA
GTACCCATCACATCACTGGTTCTTGAATGTGTGGACAGCAGAGCTGCCCA
GGCTGTCTAGCGGGCTGCGTCGTGGTGAGAACCACAAGGTGTTGTTGTGA
CCCAGGGTGCAGACAGAGATGACGAGACGTAGCAGGCGTCGGGTAGGCAC
GCACCTGGACGTGTGCCTGCCGGGCATGGACGGCATGCCTGGACACGTGC
CTATCGACACGTGGCGCGTAGAGAGATCGGGCCGGCGAGTGGCGGTTACA
CGTGACAGGCGTGGCCACCACCAATGGGATAAGCACTACAAGTACAGTAG
TACGAGAACACTCAATCTCACACACGTGCGATTGTACTCGAGTACCTCGT
TACAATTTGTATGAATCACCCATCACATCACGTCACATCATCACATCACT
CGCGTCAATCACGTCTACTGCAGCTGTGGAGCAGGGTCTCCCCGTGGGGT
GACCCCTGGAGTCAGATGGCCTATGATTTTGCAGCTATGCTTTGCTTGCA
CGGCAAGCGACTCGTCATGACCCCCGCACCTGACATTTTAGGGATGAGAG
GGTCTACAATTTTTGCCAAAAGTGGCTGCAACTATGCTCAGCGCGTTGCC
GAGACAACCCATGCGACATCCCCACGTTGCCCCCCCCCCAGGGTTGGCGC
TTAGCTCCTAAGTGGTGCCCTTTTTGGCCCTTAGTTAGGGGTATGCTATA
TTTCCCCTGCGAGTGGAGGCGGGTGAAAAGACGGGCTTCCGGAGGTGGGG
GGCCCTGAACTCGCGTAAGTAGGAACCCTCTCCTTTCCCACTCGCTTGTT
TGTCTTCGTGCCAACATTAGGGGTATTGAGGGGCAATTAGACCTTAAATG
CAGGCTAAATAGGCCGCAGTTAACCCCTAAGTGCCAACCCTGCGTGACCT
CCCTCCCGCCCCCCTTCAACAGATGGCAAAGCAGTTTGTGCCGGCAGGGC
CGGGCGGGACCATGCTGTCGCCCGCAGAGAAGTACCCTTCATGCGACAAC
TGCCCCATGAAGCTCAGCTCCTCCGGTCCGGAGTCTGCCAACGCCTGCCG
AAAATGCGGGGCCGTGAGGATGACCCTGTACGAGGTAGGGGGGCGGTGGG
GCGAGGAAAGGGGGGgggggaGGGGGGAGGCGTTGGGGGGCGATGCAGTA
CGGGCAGGCCGGCAGTGAGGACAGTACGTACGAGTGCTCGTCACATCGAT
TGTGATGGTGTGATGTGATGTGATGTGATGTCAAAGTACAGTATGTAAGA
GAGCTCGTCACATCGATTGTGATCATGTGATGTGATGTGATGTGATGTCA
AAGTGCGGTACGTACGAGTGCTCGTCACATCGATTGTGATGATGTGATGT
GATATCAAAGTACAGTATGTAAGAGAGCTCGTCACATCGATTGTGATATA
TGTGATGTGATGTGATGTCAAACTGCAGTGTTGACTACGGTAATATTCGA
GTGCGCATCACATGGCATCAGACATCAGCAGCAAGTCACTTTTCCCCACT
GCGCAGGACTGTACCTGCTCAGTGTCGACCGAGGCGCTGTAGTGGTCAAT
GGTCTCGGGATTACGGCAAGCACAATGTGGAGTACGAGTACACATATTCC
TACACGTGATAGTTGTACCACGGTTTGAGTACACATAGCTTGCATGCACG
AAGATAAACAAGGGAGTGGGAAAGAAGAGGTGTTCCTACATACGCGAGTT
CAGGGCCCCACTCCCGCTACGCTGCAGTACTATTTGGCCACACTGTGAGC
GCATGCATACTTACATGTACTACTTCGAAGTACTATTTACCCCCCCTCCC
CCCTCCAGTGATGGAATATCTAAGCAAATCAACCTATTTATCGACAGTAC
TGATATATACTCGAGTATATATATATGTATATATATATATATATATATGT
ATATATATATATATATATCGAAAGTCGATATTCGATGGTTTGACCCACAC
TAAATCCATGTAGTTAGTAACGCCACCCGCAAAATCAGTGGAGCCCGATA
ATATCTACTGATCGATATTCCATCACTGCCCCCCTCCCTCCCCAGCTGGA
GACGGACAAGCTCATGGTGCCGGACGTAGCCTACGCGGACTTCATCAAGG
CTCTGGAAAAGTCGGGCAGCTCGGTTGGCGAGGACGAGCTCACACGCTTC
GTGGAGTGGACCAAGGAGTTTGGGCAGGAGGGATGATGATGCTGACGATG
ACTGTCTTCATGACGACTGTCTTGATGACGAACGTCATCATTCATGGCTG
CGACCGTCGTGGCCGAGGCGGCCCGAGGCGCCAGCATTTCTGGACGCCAG
TTCGCCGTGTCCACATTGGGCCAGTTTCGGCCCGACAACAGTACTCGAGT
AGCCATTTATTTCCGGCGAAATCGGGCCACAAATCGTCTGAAGGGGCGGG
CTCTGATAGGCCTATTTTTGTCGGCGGCAGGGCCCCCCGGGGGTGTGGGC
GGAGCCAGGGTTGACACTTAACACTAAGTGGTGCCCTTTTAGGCCCTTAA
TTAGGTGTAGTCAGGGGTAATTAGGCCTAAAATGAAGGCTAATTAGGCCC
TAATTAACCCCTAAGTGCCAACCCTGGGCGGAGCGGCCGCTGGCAGGAAA
CGTGGGGGCGGTACTTCGAAGTACTTAGTAAAAGCCTTGCGGCGGCCGCG
GAGCCGGCTCTGGGCGACAGGGGGGCCTCCGTGGGCCTCCCTGCCGGCCG
CCCGGCCGGGCGATAGACGCCTCTGGCATGGCCATCCTGGCACTGCTGCG
TGTAAGGTGGCAGGGCTTCCGTTGAGTCCCGTTTCGGGAGGAGCCTTTTG
GCACGGGGCCTGGAACTCGCCGGCTATCTACTACTCAAGTAAGGTGGGGT
GTGTGCGAGTCACAGAGTCGCTCTCCCGATTCCTACTGTACCTAGATTGG
AGGCGCTTGTCTGTGTACGAGTACGAAGTATGTATGTAGATGTGTGGGTG
TTTTCCGAGCCGGCCGTGTTCTTTCGGAGCCAATAATGACGCGGTCGAGC
CTCATGAGCGAGTCGATCGACGACGCGGATAGTTGCAGCGAGTACTACCG
TAGGCCCGCGCTGCTGGTAGTGACTCGAGTGAGGGACGGATGATCACGAT
AATAACACCATCCGATGATCGAAGGCCGCGGCGCCGGTTTGTGAAGCGCG
CAAGCTGTCCGGCTCTTGCCTCTACTGTCGCTTGTTGTCTCTTGTCTTGT
CGCTCTCGCTGAGTCAGCGCCAGTGCGCCTCGAATTGCTGCTTGCCCGCC
GGACGGTGAGCCGCTCCAGCCATGGGACTTGGTGTACTTCATAAGTATAG
TACTTCGTATGTACTTGGTCTCGGGATTACGGCAAGCACAATGTGAGCAC
TGTACATGTACCAC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig9:1022273..1035836+

>mRNA_S-ischiensis_contig9.20521.1 ID=mRNA_S-ischiensis_contig9.20521.1|Name=mRNA_S-ischiensis_contig9.20521.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2730bp|location=Sequence derived from alignment at S-ischiensis_contig9:1022273..1035836+ (Schizocladia ischiensis KU_0333)
ATGGACAACCAATTCATACCGAAAGCCATCGAGACCGTCAAGGATGCCAT
CAACGCGGACAATGCCCAGCAATACGACATTGCACTGGGCCTCTACAAGA
AGTCCCTCGAGTACTTCATGGCCGGGCTCAAGTACGAGAACAACCCGCAG
GCGAAGGCAACGATCATGCAGCGCGTCGACGGCTATATGAAGCGCGCCGA
GACGCTCAAGGACATCCTTGCCAAGCAGGCGGATGCAAAGTCCGGGATGG
ACCAGGGCGGGGCTGGGGGTACAGGATGGACAACCAATTCATACCGAAAG
CCATCGAGACCGTCAAGGATGCCATCAACGCGGACAATGCCCAGCAATAC
GACATTGCACTGGGCCTCTACAAGAAGTCCCTCGAGTACTTCATGGCCGG
GCTCAAGTACGAGAACAACCCGCAGGCGAAGGCAACGATCATGCAGCGCG
TCGACGGCTATATGAAGCGCGCCGAGACGCTCAAGGACATCCTTGCCAAG
CAGGCGGATGCAAAGTCCGGGATGGACCAGGGCGGGGCTGGGGGTACAGG
GGGCGCCGCCACGGCGTCGGCGGACGACCAGAAGAACGGCGGGGGGGACG
ACGAGCAGAAAAAGCTAAGGGGGGCGCTGGCCGGCGCCATCGTGTCCGAG
AAGCCCAACGTGAAGTGGAGCGACGTGGCGGGTCTGGAGCAGGCCAAGTC
GGCGCTGAAGGAGGCGGTCATCCTGCCCGCAAAGTTCCCGCAGCTCTTCA
CGGGGAAGCGGCGGCCTTGGAAGGGGGCGCCGCCACGGCGTCGGCGGACG
ACCAGAAGAACGGCGGGGGGGACGACGAGCAGAAAAAGCTAAGGGGGGCG
CTGGCCGGCGCCATCGTGTCCGAGAAGCCCAACGTGAAGTGGAGCGACGT
GGCGGGTCTGGAGCAGGCCAAGTCGGCGCTGAAGGAGGCGGTCATCCTGC
CCGCAAAGTTCCCGCAGCTCTTCACGGGGAAGCGGCGGCCTTGGAAGGGT
ATCCTGCTGTACGGCCCCCCCGGTACGGGCAAGTCCTACCTTGCGAAGGC
GGTGGCGACGGAGTCCGACGCCGTGTTCTTCGCGGTGTCTTCCTCCGACC
TGGTATCCTGCTGTACGGCCCCCCCGGTACGGGCAAGTCCTACCTTGCGA
AGGCGGTGGCGACGGAGTCCGACGCCGTGTTCTTCGCGGTGTCTTCCTCC
GACCTGGTGAGCAAATGGCAGGGCGAGTCCGAGAAGCTGGTGCGAAACCT
CTTTGAGCTGGCCCGCGAGCACGAGCGGGCCATAATCTTCATCGACGAGA
TCGACTCCATGTGCGGCAGCCGCTCCGAGGGGGAGAACGACTCCGCCCGC
CGCATCAAGACCGAGTTCCTGGTGCAGATGCAGGGCGTGGGGAACACGCA
CGACGGCATCCTCGTGCTGGGTGAGCAAATGGCAGGGCGAGTCCGAGAAG
CTGGTGCGAAACCTCTTTGAGCTGGCCCGCGAGCACGAGCGGGCCATAAT
CTTCATCGACGAGATCGACTCCATGTGCGGCAGCCGCTCCGAGGGGGAGA
ACGACTCCGCCCGCCGCATCAAGACCGAGTTCCTGGTGCAGATGCAGGGC
GTGGGGAACACGCACGACGGCATCCTCGTGCTGGGGGCGACAAACGTGCC
CTGGGAGCTGGACCCGGCGATGCGCCGGCGGTTTGAGAAGCGCATCTACA
TCCCCCTGCCAGAGGCGGAGGCGAGGGCTGTGATGTTCAAGCTGCATCTG
GGGGACACGCCCAATACCCTCAAGGATCAGGGGCGACAAACGTGCCCTGG
GAGCTGGACCCGGCGATGCGCCGGCGGTTTGAGAAGCGCATCTACATCCC
CCTGCCAGAGGCGGAGGCGAGGGCTGTGATGTTCAAGCTGCATCTGGGGG
ACACGCCCAATACCCTCAAGGATCAGGACTTTGCTGGACTGGGCGGGGCC
AGCGAAGGGTGCTCTGGGTCGGACATATCGGTGATAACGCGCGAGGCTCT
TATGGAGCCCCTCCGCAAGTGTCAGGACTTTGCTGGACTGGGCGGGGCCA
GCGAAGGGTGCTCTGGGTCGGACATATCGGTGATAACGCGCGAGGCTCTT
ATGGAGCCCCTCCGCAAGTGTCAGATGGCAAAGCAGTTTGTGCCGGCAGG
GCCGGGCGGGACCATGCTGTCGCCCGCAGAGAAGTACCCTTCATGCGACA
ACTGCCCCATGAAGCTCAGCTCCTCCGGTCCGGAGTCTGCCAACGCCTGC
CGAAAATGCGGGGCCGTGAGGATGACCCTGTACGAGATGGCAAAGCAGTT
TGTGCCGGCAGGGCCGGGCGGGACCATGCTGTCGCCCGCAGAGAAGTACC
CTTCATGCGACAACTGCCCCATGAAGCTCAGCTCCTCCGGTCCGGAGTCT
GCCAACGCCTGCCGAAAATGCGGGGCCGTGAGGATGACCCTGTACGAGCT
GGAGACGGACAAGCTCATGGTGCCGGACGTAGCCTACGCGGACTTCATCA
AGGCTCTGGAAAAGTCGGGCAGCTCGGTTGGCGAGGACGAGCTCACACGC
TTCGTGGAGTGGACCAAGGAGTTTGGGCAGGAGGGATGACTGGAGACGGA
CAAGCTCATGGTGCCGGACGTAGCCTACGCGGACTTCATCAAGGCTCTGG
AAAAGTCGGGCAGCTCGGTTGGCGAGGACGAGCTCACACGCTTCGTGGAG
TGGACCAAGGAGTTTGGGCAGGAGGGATGA
back to top