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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 387 |
| Cds size | 384 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817364.4369137-CDS-S-ischiensis_contig9:619579..619636 | 1622817364.4369137-CDS-S-ischiensis_contig9:619579..619636 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 619580..619636 - |
| 1695741058.9454408-CDS-S-ischiensis_contig9:619579..619636 | 1695741058.9454408-CDS-S-ischiensis_contig9:619579..619636 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 619580..619636 - |
| 1622817364.4491787-CDS-S-ischiensis_contig9:621574..621901 | 1622817364.4491787-CDS-S-ischiensis_contig9:621574..621901 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 621575..621901 - |
| 1695741058.9622874-CDS-S-ischiensis_contig9:621574..621901 | 1695741058.9622874-CDS-S-ischiensis_contig9:621574..621901 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 621575..621901 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20474.1 >prot_S-ischiensis_contig9.20474.1 ID=prot_S-ischiensis_contig9.20474.1|Name=mRNA_S-ischiensis_contig9.20474.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=128bp
GNQSLLALRRCDLAGGRRLQAQEVRPPNPHQGTFATPRSRFGKAPASVVY
TPWHFRVGVEGGLLSTVGFGVIDGRNWPVGIQPRFHRKNNIMSAVFLARM
DENSRDFVKARAGVSGGARAPGRPAHAL back to topmRNA from alignment at S-ischiensis_contig9:619579..621901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20474.1 ID=mRNA_S-ischiensis_contig9.20474.1|Name=mRNA_S-ischiensis_contig9.20474.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2323bp|location=Sequence derived from alignment at S-ischiensis_contig9:619579..621901- (Schizocladia ischiensis KU_0333)
GGAAATCAAAGTTTGCTTGCTTTGCGACGCTGCGACCTGGCGGGGGGGCG
CCGTCTGCAGGCCCAGGAGGTCAGGCCCCCAAATCCGCACCAGGGGACAT
TCGCTACCCCGCGCAGTCGCTTTGGCAAGGCGCCGGCGAGCGTGGTGTAC
ACCCCTTGGCATTTTCGGGTAGGCGTTGAAGGCGGATTGCTATCTACAGT
AGGCTTCGGAGTGATTGACGGAAGGAATTGGCCGGTGGGGATACAGCCTC
GATTCCACCGCAAGAACAACATCATGAGCGCGGTGTTTCTGGCGCGTATG
GACGAGAACTCCAGGGATTTCGTCAAGGTGGGGGTGTTCCTTTGCCCTCC
CCCATCGCAGGAATTCAAACAAGCTCGACCACGCTTGCGTACCTGCGCAC
GCCTCGCTTAGGAGCCTAGCATAGCTCTGATTAGCCCTACAACGGCGGTG
TACTGTCGTGACTCTGTTCGGCAGCCCAATCGATACTACGGCGGTGCACC
ATGTGGCGGCCTCTATGTTAACTTAGGCTAGCCCAACTGTTCCCCCTGTG
TTAAGGCTCGGTCTCACTTGAGCCAGGTGGGTTTCATCACGGCTGTGCCC
GTGGGCGGGTCGTTCTGATGTATATATTAGGCCATCAGGTCTAGGTCAGG
CCGCACATTTCACGCGGGGCACGTGGTAAGCCGGTGTTGCCCGCGTCTGA
GCTGCAGCTGCAAGACGTTGGCTGATCGCGTGAGAGCTTAAAGCTCTACT
GCAAGCTACGGCCGGAAAAGCTGTGAGCTTCGGCCAGTATCTGCGCCGCG
TCACACGAAACGTCCTGATCCGCTTGGGAGTCCAGTCCCATGTATCCCCT
GCGCCGCACCGAGCACCCCCCGGGTCGATTGGCGTGACTAGCTTCGAAGA
AAGAGGGTATCGCGAGATTTCCAGGCACTCAGTCCTTCTGCTGAGCGCCT
TGTTTCATTTAAACCTCGCTTGGCTTATACCTACCAAGCGCAGCACATCC
ACTTCTGTCCGAGTCCGACTATACCCCAGGTGGGGAAAGTTGAGGCCTTG
CATCCCTTGGGGGCTCTCAGAGAGCGGCCGTTCTTAGCGGGGACTGAGAA
ATGCGCGAGGCTAGGGTTCAGGGTTAGGGTCAGGGTTAAGGTTAGGGTTA
GGCAAAGTGCGCGAAACGTGCAGGCGTTTCAAAGGTCCGAAATATCGTTG
TTTCGGATGTGGCACGCTCCGCTGCGAACCCCAGGCCGAGCCCCCAGAAG
AATGGCGGCATAGAAATGCGTGCTCGGGGCACGAAGAGGGCCATGCGAGA
TACCGTAGTCGTCGGAGAGTTTTTGCCCTCACGGGACAATTTTCGGGGGA
ACATTTCTGGCCGGACAGGTCCTGGATTGTCCCGAAAGTCCTCGGAAAAG
TTCCCCCAGGTCCTGAGGGATATTTTCCAAGTTTTCGTGCGCGAATCCGG
CCAGTATTCGGCGAGAAATGCCCTCCCGAAAATTGGCCCGGGGGGCCAAG
ATCTCTCCGACGATTTACGGTATCCGCGCGCCACTCGGCACACAACAGGC
AAAACTTTCAAACTTCGAGGAGCAAAACATGCGGTGTTTCTCAGCGGCCC
TCTGCGTCGATGGTAAAGTAGCGCCCAGAGTTTTCCGCTCACCCGCCATC
ACCCGCGAGGCCCTCCTGGTACTCATCACAAAATGCCCCTCGGTTCGTCA
ACCATGCCCAGGGCGAGGGACGGAGCGGGAGGGGGAGAGGGATAGAGATG
CGCTTAAGCCTTCTACCCCTGGGGTCCGTATAATCATAGGGTTTAGTGCG
TAAGTCCAATCAACCAGGGGTAAAACGGTTCAGTCATCCGGTGCGTCCGC
CGCTTTTGCCGCCACAGAGCCCTGAGCCTGCCCTGAATGCCCGCCGGCTC
CGTGACGTCCCCCCCTCCCCCGTCCCCCCCCCCCCCCCGCCGTCGCTGGA
ATCCGCCCCAGCCAGTGATGGAATATCTAGGCAAATCAACCTATCTATCC
ACAGTACTGATCTATTTTGAGTGGTAGATAAGCGGCGAGTTCCAGGCCCC
GTGCCAAAAGGCTCGTCCCGAAACGGGACTGAACAAAGGCCTTCTTCCCC
TCACAGGGCAAGGAGAAACAAAAAATATATCTGTCGGTACTAGTCGATAT
TCGATAGTTTGACCCACACTAAATCCAAGTAGCTAGTCACGCCACCCACA
AAATCAGTCGAGCTCGATCGCTATCACTGATCGATATTCCATCACTGGCC
CCAGCTCCACTCCAGGCGCGAGCAGGTGTTTCGGGAGGAGCGCGAGCTCC
GGGGCGGCCAGCGCATGCTCTAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:619579..621901- >mRNA_S-ischiensis_contig9.20474.1 ID=mRNA_S-ischiensis_contig9.20474.1|Name=mRNA_S-ischiensis_contig9.20474.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=768bp|location=Sequence derived from alignment at S-ischiensis_contig9:619579..621901- (Schizocladia ischiensis KU_0333)
GGAAATCAAAGTTTGCTTGCTTTGCGACGCTGCGACCTGGCGGGGGGGCG
CCGTCTGCAGGCCCAGGAGGTCAGGCCCCCAAATCCGCACCAGGGGACAT
TCGCTACCCCGCGCAGTCGCTTTGGCAAGGCGCCGGCGAGCGTGGTGTAC
ACCCCTTGGCATTTTCGGGTAGGCGTTGAAGGCGGATTGCTATCTACAGT
AGGCTTCGGAGTGATTGACGGAAGGAATTGGCCGGTGGGGATACAGCCTC
GATTCCACCGCAAGAACAACATCATGAGCGCGGTGTTTCTGGCGCGTATG
GACGAGAACTCCAGGGATTTCGTCAAGGGAAATCAAAGTTTGCTTGCTTT
GCGACGCTGCGACCTGGCGGGGGGGCGCCGTCTGCAGGCCCAGGAGGTCA
GGCCCCCAAATCCGCACCAGGGGACATTCGCTACCCCGCGCAGTCGCTTT
GGCAAGGCGCCGGCGAGCGTGGTGTACACCCCTTGGCATTTTCGGGTAGG
CGTTGAAGGCGGATTGCTATCTACAGTAGGCTTCGGAGTGATTGACGGAA
GGAATTGGCCGGTGGGGATACAGCCTCGATTCCACCGCAAGAACAACATC
ATGAGCGCGGTGTTTCTGGCGCGTATGGACGAGAACTCCAGGGATTTCGT
CAAGGCGCGAGCAGGTGTTTCGGGAGGAGCGCGAGCTCCGGGGCGGCCAG
CGCATGCTCTAGCGCGAGCAGGTGTTTCGGGAGGAGCGCGAGCTCCGGGG
CGGCCAGCGCATGCTCTA back to top
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