mRNA_S-ischiensis_contig9.20437.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20437.1
Unique NamemRNA_S-ischiensis_contig9.20437.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:429075..434660 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1041
Cds size1041
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817363.7543173-CDS-S-ischiensis_contig9:429074..4290981622817363.7543173-CDS-S-ischiensis_contig9:429074..429098Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 429075..429098 +
1695741058.525937-CDS-S-ischiensis_contig9:429074..4290981695741058.525937-CDS-S-ischiensis_contig9:429074..429098Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 429075..429098 +
1622817363.7685997-CDS-S-ischiensis_contig9:429848..4300121622817363.7685997-CDS-S-ischiensis_contig9:429848..430012Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 429849..430012 +
1695741058.5381446-CDS-S-ischiensis_contig9:429848..4300121695741058.5381446-CDS-S-ischiensis_contig9:429848..430012Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 429849..430012 +
1622817363.7828462-CDS-S-ischiensis_contig9:431035..4311941622817363.7828462-CDS-S-ischiensis_contig9:431035..431194Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 431036..431194 +
1695741058.5532355-CDS-S-ischiensis_contig9:431035..4311941695741058.5532355-CDS-S-ischiensis_contig9:431035..431194Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 431036..431194 +
1622817363.79937-CDS-S-ischiensis_contig9:431507..4316941622817363.79937-CDS-S-ischiensis_contig9:431507..431694Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 431508..431694 +
1695741058.5639613-CDS-S-ischiensis_contig9:431507..4316941695741058.5639613-CDS-S-ischiensis_contig9:431507..431694Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 431508..431694 +
1622817363.8144073-CDS-S-ischiensis_contig9:432747..4329061622817363.8144073-CDS-S-ischiensis_contig9:432747..432906Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 432748..432906 +
1695741058.5750847-CDS-S-ischiensis_contig9:432747..4329061695741058.5750847-CDS-S-ischiensis_contig9:432747..432906Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 432748..432906 +
1622817363.8271675-CDS-S-ischiensis_contig9:433628..4338951622817363.8271675-CDS-S-ischiensis_contig9:433628..433895Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 433629..433895 +
1695741058.5858705-CDS-S-ischiensis_contig9:433628..4338951695741058.5858705-CDS-S-ischiensis_contig9:433628..433895Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 433629..433895 +
1622817363.8399565-CDS-S-ischiensis_contig9:434579..4346601622817363.8399565-CDS-S-ischiensis_contig9:434579..434660Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 434580..434660 +
1695741058.5971603-CDS-S-ischiensis_contig9:434579..4346601695741058.5971603-CDS-S-ischiensis_contig9:434579..434660Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 434580..434660 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20437.1prot_S-ischiensis_contig9.20437.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 429075..434660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20437.1

>prot_S-ischiensis_contig9.20437.1 ID=prot_S-ischiensis_contig9.20437.1|Name=mRNA_S-ischiensis_contig9.20437.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=347bp
GGGRVLARRGRDRQGNEEADGEELPIAMDEEASEAGGAASAAESSSEEDG
EDDKHPDAALMHRYNWRALPLPNEILESPFRCPGCGLLSDSCSCPEGFPA
WLEGGRGQDKQQQFSRFQCFDVAECRWCRDNPGQLLLVAHWALDTLTLTG
GGGRDYRDQDARSLGRAGKGDDSRRGGKRVREDDDLGGGSSEPALPGGVS
GENLYSYGYRYRQGWGKRSRRGGGDDASSVQDLSPRTQASRSVSPRLPGG
LTVSPAAAAAAAAAALGLRSGTVEVKLVLTGNTRLRVDVAGALTRPGKAV
AAVGAAGQPGLPQEQQGRARARPDPPKGPSPFLPAGTISSSGLALPN
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mRNA from alignment at S-ischiensis_contig9:429075..434660+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20437.1 ID=mRNA_S-ischiensis_contig9.20437.1|Name=mRNA_S-ischiensis_contig9.20437.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5586bp|location=Sequence derived from alignment at S-ischiensis_contig9:429075..434660+ (Schizocladia ischiensis KU_0333)
GGTGGCGGCCGGGTGCTGGCACGGGTGAGCGGGGAAAGTTGGAGGAATGG
GGGGGATGGCCGAGTGAGCAGCTGACTGACTGACGGGCAGTGCAGTAGTG
ACTGAAGCACCTGATTTTGGTGTTTTGTTCCCCCGGGGTGTGTTTTGCGC
CCTGGTAGTGCTGTTTCGAGCGTGGATTCAGTGAACTGTATTCGACGTCG
CCTGTATGAAAAGTGCCATACAAGAATCTCCGGAGGTACTCTTGTGTACG
CAGTGTATTTCATACTTGCACAAGTGGCTGAACATGCACAGATGTATTGA
CTTTCGTGCTCGCTCTATGTAGTGTCAGAACCACTGACCATGTGCCTGCG
GTAGACGGAAGACGGAGCAGGGCCTTCCAGCCCCGGGCAGAGCCAGGGTG
ATAGGCGCCACAATGCACTAAGTACTGCTACAGGTAGTATTGCTCAAGGG
TGGCCCAAAGGCCCCTTGTGAGCAACATACATCGCATTCCCTGGGTGTTC
TCAGGGCGTGGAAGGCGATGTTGACATGGCCGTCAACGGTGTGCATGGCC
AACGGCACATCCCCCAGGTTTGCCATTACGTCCGTCGCAAGCAAGCTCTT
GACGCATGCCGTGCTACTTCCGGAAGTACTAAATATGTGCTCGTACGAGT
ACGTGCTACACTTTGAGGTATTTGGAAGTACATACTCAGTAGTGCTTTGT
CGGGGCTGACTGATGTGGACACGCCCCCCCCTTTTCGCCTGCCGCCGCCG
CCACCACCACTTCCGTGGCCGCAGCGGGGCCGGGACCGGCAAGGCAACGA
GGAGGCGGACGGAGAGGAACTCCCCATCGCCATGGACGAGGAGGCCAGTG
AGGCCGGGGGTGCGGCGTCGGCCGCCGAGAGCAGCTCCGAGGAGGATGGC
GAGGACGACAAACACCCCGACGCGGCGCTCATGCACCGGTGGGTAAAGTC
AACCAGTTGTACAGTACTCCAGTATGGTTCATGCTACGTATTGTATTGAG
GTCTCCAGTGACATGGCCCGCACCTCGCCCCGTGTTGTTTATTAAAATAT
AAATTGTAACGAGGTACAATCGCACGTGTGTGTGATTGACTATCCCCATG
TTAGTACTTGTCCCATTTAAGAATTATACTTCGTATTAGTGATGATCGCA
TCAAGGAACTAAGAACAAGGAGGGGGGGTACTCAGGTAGTTGTTCTTGAT
CTCGGTCTGGGTTTGGTCCTTTTCATTTTGTGACATGCCCGACTGCGAGC
GAAGGCGAACGAACCAACGAAGGGCTTCTGTGTTGGGGGCCCGGACACTA
AGGCAGGTGAAGACGCCTCCTCTTTGTCCCGCCCCTTGCTTGATTATCTT
CTTGTACAGAAACTGCGTGGGTCGATTCGGTGTTGTGTTCGCGTGGTTGA
TAGCTACGGTTGCTCAAAGCTGCTCTCTGGTGCTCTGGAGTATCGCCCGA
CCACGAGGGGACCTGAGTTTTGGCTTCTTTTTGTGCAAAGGGCTTAGGTA
TGTGAGTAGTACTGTGCCCATGAGCATATACTTTTGGAGGATGTGATATG
TGTACACACGCTGTGCTTGCCGTAGTCCCAAGAGCATTGACCACGCGCCT
CAATCGGGACGGAGCAGGGGGGTGGCTAAACTGTAGGGGCTTAGTGAGGA
GGTGCAGTGAAGCAAGCTAGTGTAGTGTACTCGAGTACCGACAGTTAAGT
ACTGTGACAGCCCGCTGAGGGTCAAGCAATGAAGTGTCAAGTGATGATCC
ACACATGGCGATGGAGCACTCAAGGCCGTGCGTCCCCCACGGGGTACTCA
AGTACCGTCTCTTTCTCGCCCAGCCCTGCCCCGGACCCTATGCGTTAACA
CTGTCAAACGCCATGAACAGTACGAGAACAGTCAGTCTCACACACGTGCG
ATTGTACCTCGATACAATTTATATGAATCACCGCCGTCAAACGCCGTCCG
TGCCTGTCCAGCTACAACTGGAGAGCGCTGCCGCTGCCCAACGAGATACT
GGAGTCTCCCTTCAGATGCCCTGGGTGCGGCCTCCTCAGCGACTCCTGCT
CCTGTCCGGAGGGGTTCCCCGCTTGGCTGGAAGGCGGTAGGGGACAGGAC
AAGCAGCAGCAGTTCAGCAGGTGGTGTGTGTCCCACTGCGTTGGTTGTCC
CTCACGTGATGTGTGTCCCACTGTGTTGGGAGGGGGTGCCATGATGCACA
CTCCACTCTACTTCGAAGTACAATGCTGCAGTTGGACACCACGTCACATC
GTATCAACCGCTAGCTTGGTGCCCGTCGACGGCTGTTGTGGCAGCAGGTT
CCAATGCTTCGACGCGGCCGAGTGCCGCTAGTGCCGCGACAATGACTGCA
ATGTGACTTGACATTATGCACACTCTACTCTACAATGCTGCAGTTTGACA
CCACATCACATCATATCACGACTGTTGTGGCAGGTTCCAATGCTTCGACG
TGGCGGAGTGCCGCTGGTGCCGCGACAACCCGGGCCAGCTGCTGCTCGTG
GCACACTGGGCTCTGGACACCCTGACGCTGACTGGCGGGGGCGGGCGGGA
CTACCGGGACCAGGACGCGCGTTCCCTGGGGCGCGCGGGGAAGGGAGACG
ACTCCAGACGTGGGGGGAAGGTACGTGGCACTGGTGCTTAGATGAACACG
TGCTGTCACATACCCGCCCTCCCCCTCTCCTCCTCCTCCTCCTCCACCAC
CACCACCTCCTCCTGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTACCTCCTCCTAGCTCCTCCTCCTCCTCCTACCTCCTGC
TCCTCCTCCTACCTCCTCCTCCTCCTCCTACCTCCTCCTCCTGCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTACCTCCTCCTCCTCCTCCCCGTCCTCCT
CCTACCTCCTCCTCCTCCTACCTCCTCCTCCTCCTCCTCCTCCTACCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACCTCCTCTTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCTTCTGCTCCT
CCCAGTTTCTGAACCTTGACCACGCCGACCTCCGCCTTCTTGCACCCCCT
ACCTACTGGACGCTGATTCTCCCCCCTGACCCAGAACCGCAACCCTACCC
ATGAAGCACATTCGACAATTTCCTGCAACAGACAATGTATCAGAACTTGT
TTATGTCAACAGAAGAAAAAACACCTGTAGCCCCCCTGAGCTTGGGCCGC
CCCGGCCCCAACCATTTCCCGAATCTTTTCCTTAACCCTAGCCCGGGCCC
GAACCGTAACAGCGAGGGCCCAACCCCGCCCCAAACCATCACCCTAACAC
CAAAACCAGATCTAACCCTGTTTTTATTTCTTTGATGTGATAGCCACTAA
TACGAGAACCCTCAATTCTCAATTTGAGTGGTAGATAAGCAGCGAGTTCC
AGGCCCCGCGCCAAAAGGCTCGTCCCGAAACGGGACTCAACGAACCCCTT
CTTCCCCGACATCCACTAATATGAGAACACTCAATCTCACACACGTGCAA
TTGTGCCTCATTACTTCGTACAGTTTATCTGAATCCCAGCTCTAACCCCT
ACTCTACACCGCAACCCTGACAGCGAGTGCGAGAGGACGACGACCTCGGC
GGTGGCAGCAGCGAGCCCGCCTTGCCCGGCGGGGTGTCCGGCGAGAACCT
GTACAGCTACGGGTACCGCTACCGCCAGGGCTGGGGGAAGAGGTCCCGGA
GGGGGGGCGGGGACGACGCTTCATCAGTGCAGGTAAAGTACAGTAGAGTA
CAGTTCAGTACAGTGCAGTACAGCACAGTACAGTGAAGTACAGCACTGCA
CAGTACAGTATAGTACGACACAGCACAGCACAGCACGTTGCAATGTGTGT
ACCGTACGGCTACTCACGGAGACTTTGCGGGTAGGTCGGTGAAGGATGAA
TCATTCAGTACGCGCAGAACGGGAACACACTTCCAAGTACTCGTATGTCT
TTGGCACCCACCCGCCGAGCCAATCTTTCATCAACATGAGGTTGCAAGTT
TTCATACTGTACCCGGGCATGCAGAGAGTTCTTGCCGCACGCCACGAGCC
TTGCTGTACCTGTCGCTGTGGTGCGTGAGTTTGGACGTTTCCGACGGCGT
GCAATAGTTGCACGTGAAGTGAGTGATTGTACACATGTTGGTGTAGGCGC
GGAGCAGGCATGTGCGTCGCTGTAGTGTGTTCTCATCTAAGGGCTGTTCT
TAACGCGGTGCCAAATCGGGCTTCCATGTCTTCCATTTCTTCCCCTCCAT
TTGTAGAATGGAAGCACGACGCAACATTTGTCAACAATGGGTTCTTCCAT
TTCTTCCATTCACGGACATCGGGTCATTGCAAAGACATCTCCTCTCGTCC
CCTCCCCTCTCCTAATCTCCCTCCCTCCCCCTCCCTCTGCTCCCCTCCCC
TCCCGTCCTCTCCCATCCCTACCCCCCCCGCCCCCTGTCATGCCGTCCTT
GCAGGACCTCTCCCCTCGCACCCAAGCCTCCCGCTCGGTCTCCCCGCGGC
TCCCGGGGGGGCTCACGGTCAGCCCCGCGGCGGCGGCCGCGGCAGCAGCA
GCGGCGCTGGGGCTCCGTTCGGGCACGGTAGAGGTGAAGCTAGTGCTCAC
GGGCAACACCAGGCTGCGGGTGGACGTGGCCGGGGCCTTGACGAGGCCTG
GGAAGGCGGTTGCAGCGGTCGGGGCAGCAGGGCAGCCGGGCCTTCCTCAG
GAGCAGCAGGGGCGGGCCAGGGTGGGTTTTTATCCCATTTACCACTGGGA
AATTGGACTCCCATTCTAGAACCCTATGGTTATACGGACCCCAGGGGTAA
AAGGGTTTAGGCTCGGTGACGTTGTAGGCGGGTGGGAGAGGGGCGGCGGC
TTGACAAGACTGAGGAGGGCTTGCTCAATTTGTCTCGGACTGCGTAGTGA
GGGACTACCGGACAGTAGTGCGCTCACGTCGTGTGCGCTGTCTCCTCGGC
ATGCTGTGTGTACTCGTGCTTGTACTCTCCAATATCGTAGGCATTTGGCC
ACCAGTTGACCCCTCGTATCATCCCTGCTATGTGTGCCGGGATGGAGGAG
CACGCCCGGTATACACTGGCCTTGCGGCACTCACAAGTACACGTTCTCGC
TCTCTCGCTCGTCCCACCCTCCCTTGCTCTCTCACGCGTCCCACCCTCTG
TACCCCCCCCCCCCCCCCCCCTACGTTCTTCCTGTCCACCCCTTCACCCT
CTTTTTCTTCATCTCACCCGCTTTTACCGCCTCTTCCTCTCTCTCGACGT
GTCTCGCCCACTCCTACGTTCTTCCTGTCCCAACCCCTTGACCCTCTGTT
TCTTCACCTCACCTGCCTCTACCGCCTCTTCCTCTCTCTCGACGTGTCTC
CCCCCCCACCTCCCAACCTCCCTGGCCTGGCCATCCCTCCCGCCTCTTCC
CGCAGGCCCGCCCGGACCCTCCCAAGGGCCCCTCACCTTTCCTGCCCGCC
GGGACCATCTCCTCCTCGGGCCTCGCGCTCCCCAAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:429075..434660+

>mRNA_S-ischiensis_contig9.20437.1 ID=mRNA_S-ischiensis_contig9.20437.1|Name=mRNA_S-ischiensis_contig9.20437.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2082bp|location=Sequence derived from alignment at S-ischiensis_contig9:429075..434660+ (Schizocladia ischiensis KU_0333)
GGTGGCGGCCGGGTGCTGGCACGGGGTGGCGGCCGGGTGCTGGCACGGCG
GGGCCGGGACCGGCAAGGCAACGAGGAGGCGGACGGAGAGGAACTCCCCA
TCGCCATGGACGAGGAGGCCAGTGAGGCCGGGGGTGCGGCGTCGGCCGCC
GAGAGCAGCTCCGAGGAGGATGGCGAGGACGACAAACACCCCGACGCGGC
GCTCATGCACCGCGGGGCCGGGACCGGCAAGGCAACGAGGAGGCGGACGG
AGAGGAACTCCCCATCGCCATGGACGAGGAGGCCAGTGAGGCCGGGGGTG
CGGCGTCGGCCGCCGAGAGCAGCTCCGAGGAGGATGGCGAGGACGACAAA
CACCCCGACGCGGCGCTCATGCACCGCTACAACTGGAGAGCGCTGCCGCT
GCCCAACGAGATACTGGAGTCTCCCTTCAGATGCCCTGGGTGCGGCCTCC
TCAGCGACTCCTGCTCCTGTCCGGAGGGGTTCCCCGCTTGGCTGGAAGGC
GGTAGGGGACAGGACAAGCAGCAGCAGTTCAGCAGCTACAACTGGAGAGC
GCTGCCGCTGCCCAACGAGATACTGGAGTCTCCCTTCAGATGCCCTGGGT
GCGGCCTCCTCAGCGACTCCTGCTCCTGTCCGGAGGGGTTCCCCGCTTGG
CTGGAAGGCGGTAGGGGACAGGACAAGCAGCAGCAGTTCAGCAGGTTCCA
ATGCTTCGACGTGGCGGAGTGCCGCTGGTGCCGCGACAACCCGGGCCAGC
TGCTGCTCGTGGCACACTGGGCTCTGGACACCCTGACGCTGACTGGCGGG
GGCGGGCGGGACTACCGGGACCAGGACGCGCGTTCCCTGGGGCGCGCGGG
GAAGGGAGACGACTCCAGACGTGGGGGGAAGGTTCCAATGCTTCGACGTG
GCGGAGTGCCGCTGGTGCCGCGACAACCCGGGCCAGCTGCTGCTCGTGGC
ACACTGGGCTCTGGACACCCTGACGCTGACTGGCGGGGGCGGGCGGGACT
ACCGGGACCAGGACGCGCGTTCCCTGGGGCGCGCGGGGAAGGGAGACGAC
TCCAGACGTGGGGGGAAGCGAGTGCGAGAGGACGACGACCTCGGCGGTGG
CAGCAGCGAGCCCGCCTTGCCCGGCGGGGTGTCCGGCGAGAACCTGTACA
GCTACGGGTACCGCTACCGCCAGGGCTGGGGGAAGAGGTCCCGGAGGGGG
GGCGGGGACGACGCTTCATCAGTGCAGCGAGTGCGAGAGGACGACGACCT
CGGCGGTGGCAGCAGCGAGCCCGCCTTGCCCGGCGGGGTGTCCGGCGAGA
ACCTGTACAGCTACGGGTACCGCTACCGCCAGGGCTGGGGGAAGAGGTCC
CGGAGGGGGGGCGGGGACGACGCTTCATCAGTGCAGGACCTCTCCCCTCG
CACCCAAGCCTCCCGCTCGGTCTCCCCGCGGCTCCCGGGGGGGCTCACGG
TCAGCCCCGCGGCGGCGGCCGCGGCAGCAGCAGCGGCGCTGGGGCTCCGT
TCGGGCACGGTAGAGGTGAAGCTAGTGCTCACGGGCAACACCAGGCTGCG
GGTGGACGTGGCCGGGGCCTTGACGAGGCCTGGGAAGGCGGTTGCAGCGG
TCGGGGCAGCAGGGCAGCCGGGCCTTCCTCAGGAGCAGCAGGGGCGGGCC
AGGGACCTCTCCCCTCGCACCCAAGCCTCCCGCTCGGTCTCCCCGCGGCT
CCCGGGGGGGCTCACGGTCAGCCCCGCGGCGGCGGCCGCGGCAGCAGCAG
CGGCGCTGGGGCTCCGTTCGGGCACGGTAGAGGTGAAGCTAGTGCTCACG
GGCAACACCAGGCTGCGGGTGGACGTGGCCGGGGCCTTGACGAGGCCTGG
GAAGGCGGTTGCAGCGGTCGGGGCAGCAGGGCAGCCGGGCCTTCCTCAGG
AGCAGCAGGGGCGGGCCAGGGCCCGCCCGGACCCTCCCAAGGGCCCCTCA
CCTTTCCTGCCCGCCGGGACCATCTCCTCCTCGGGCCTCGCGCTCCCCAA
CGCCCGCCCGGACCCTCCCAAGGGCCCCTCACCTTTCCTGCCCGCCGGGA
CCATCTCCTCCTCGGGCCTCGCGCTCCCCAAC
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