mRNA_S-ischiensis_contig9.20420.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: UPI00077A106F (NADPH-dependent aldehyde reductase ARI1-like isoform X1 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A106F) HSP 1 Score: 107 bits (266), Expect = 2.190e-22 Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 2
Query: 5 NLCLYLVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAYAE 406
+CL + DVRD A+AH AL AP A G R V V TD W+ D+A+VLS+EF PLGY VPTW P+F +++ ++A+ D + LDN+KIK LG + ++++++ M ++LI G++ +TP Y E
Sbjct: 220 KICLPICDVRDTAKAHISALTAPSAPGNRYVIV-TDCMWVTDIAKVLSEEFKPLGYNVPTWAFPSFGLKIVSWFDASVKAMIPFLDH--ELKLDNSKIKADLGYQPTDLKKSIIDMAYNLIDSGFIKKTPQYEE 350
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A2T7NBJ4_POMCA (Epimerase domain-containing protein n=6 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NBJ4_POMCA) HSP 1 Score: 99.4 bits (246), Expect = 1.380e-19 Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 2
Query: 20 LVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAY 400
+VDVRD A AH RA+ P AAG R +C + ++ W +A +L F P GY VPT T P + R++ LR+L +GV + DN+K+++VL +E R + +T++ M HSLI+ G+V TP Y
Sbjct: 227 IVDVRDVALAHVRAMTLPEAAGNRFICSNVNL-WFSQMALLLDAVFRPQGYNVPTCTAPKLILRVVSLFDKSLRSLLP--QVGVVHTFDNSKMRQVLKVEPRDVRDTIIEMAHSLIQGGFVKTTPGY 350
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A6P5A911_BRABE (patellin-2-like isoform X4 n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A911_BRABE) HSP 1 Score: 97.1 bits (240), Expect = 3.500e-18 Identity = 55/136 (40.44%), Postives = 82/136 (60.29%), Query Frame = 2
Query: 14 LYLVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAYAEHERGQ 421
L ++DVRD A+AH AL AA R + V +M WL +VA++L+KEF P GY VPT + P FL R+ LR + +G ++ DN ++K VLG+E RP+ ET++ M +SL+ G+V +T Y H + +
Sbjct: 377 LNIIDVRDVAKAHIIALTNEQAADNRHILVQGNM-WLREVAQILAKEFKPQGYNVPTMSCPKFLLRISSWFDGGLRMVVP--YVGKVLTCDNKRMKDVLGIEERPLNETILDMAYSLVDGGFVKKTSKYKGHPKNR 509
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A1H9EQX1_9PSEU (Uncharacterized protein n=2 Tax=Lentzea albida TaxID=65499 RepID=A0A1H9EQX1_9PSEU) HSP 1 Score: 90.9 bits (224), Expect = 3.770e-18 Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 2
Query: 5 NLCLYLVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYV 382
NL + +VDVRD A AH RA+ APGAAGQR++ L DV +L + G VPT T P+F+ RL R +P LR++ + D+G + K +RVL E RP +E +V+ G S++ G V
Sbjct: 35 NLWMPIVDVRDVAAAHVRAMTAPGAAGQRILVARGQSLALEDVGALLKADLGEAAKRVPTRTLPDFVVRLAARFTPELRSVTA--DLGFVKGVSTDKARRVLDWEPRPAQEAVVAAGLSMVEKGLV 158
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A6P5ADG3_BRABE (patellin-2-like isoform X1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5ADG3_BRABE) HSP 1 Score: 97.1 bits (240), Expect = 4.280e-18 Identity = 55/136 (40.44%), Postives = 82/136 (60.29%), Query Frame = 2
Query: 14 LYLVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAYAEHERGQ 421
L ++DVRD A+AH AL AA R + V +M WL +VA++L+KEF P GY VPT + P FL R+ LR + +G ++ DN ++K VLG+E RP+ ET++ M +SL+ G+V +T Y H + +
Sbjct: 377 LNIIDVRDVAKAHIIALTNEQAADNRHILVQGNM-WLREVAQILAKEFKPQGYNVPTMSCPKFLLRISSWFDGGLRMVVP--YVGKVLTCDNKRMKDVLGIEERPLNETILDMAYSLVDGGFVKKTSKYKGHPKNR 509
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A0F0LSU0_9MICO (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase n=5 Tax=Microbacterium TaxID=33882 RepID=A0A0F0LSU0_9MICO) HSP 1 Score: 94.0 bits (232), Expect = 9.280e-18 Identity = 56/128 (43.75%), Postives = 71/128 (55.47%), Query Frame = 2
Query: 2 VNLCLYLVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVA 385
+NL L +VDVRD A+AH RA+ P AAG R + + LP VARVL +E G VPT T PN+L RL R P LR + + D+G +D + RVLG RP ET+ S+I G VA
Sbjct: 228 INLWLPIVDVRDVADAHLRAMTTPDAAGHRFLLASGEGLTLPQVARVLREELGTDAARVPTRTTPNWLVRLAARRKPELRGVAA--DLGHVKRIDASAAGRVLGWSARPARETVADAARSMIAAGLVA 353
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A524NU86_9DELT (Aldehyde reductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NU86_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 1.000e-17 Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 2
Query: 20 LVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAY 400
+VDVRD A AH A+ P AAG R +C D +W+ D+AR L +EFGPLGY +PT P +L ++ R +RA +G + +A++ LG RP+ ETL MGHS+I G V T Y
Sbjct: 230 VVDVRDVASAHILAMTKPEAAGNRYICAG-DHYWMQDLARELEREFGPLGYRIPTGRLPYWLMWIVARFDSTVRAALQ--FVGRREEVSHARLTSDLGWSPRPVRETLSDMGHSMIAHGVVPTTELY 353
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: A0A7R8ZR93_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8ZR93_9CRUS) HSP 1 Score: 93.6 bits (231), Expect = 3.420e-17 Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 2
Query: 5 NLCLYLVDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAYAE-HER 415
N+ L +VDVRD A AH RA+ P AAG R + V T+ + +V ++L KEF Y+VPT+ PNF+ R V R+R + P + + + +DN+++K VL + R + + L+ GHSLI+ G V RT Y + HE+
Sbjct: 351 NIELQMVDVRDVALAHLRAMFTPEAAGHRHI-VHTECLTMSEVGQILYKEFNQYCYSVPTYQLPNFVCWFARFVDARMRNIIYP-RLNLHLRMDNSRMKDVLKITPRDVRQGLIDEGHSLIQFGVVKRTAKYKKKHEQ 486
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: UPI00178CF5B4 (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Myceligenerans sp. TRM 65318 TaxID=2776917 RepID=UPI00178CF5B4) HSP 1 Score: 91.3 bits (225), Expect = 6.720e-17 Identity = 56/121 (46.28%), Postives = 71/121 (58.68%), Query Frame = 2
Query: 23 VDVRDAAEAHTRALMAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCD-IGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYV 382
VDVRD A AH RAL P AAG R VC ++ W ++A +L +EFGPLGY VPT P +L ++ R R +R D +G P +++AK LGL RP+ ETLV G SLI G V
Sbjct: 220 VDVRDIATAHRRALEVPRAAGNRYVCAGPNV-WFGEMAEILREEFGPLGYRVPTAHMPYWLLWVLARFD---REVRLGLDFVGSPELVNSAKAAAELGLTLRPVRETLVDTGRSLIDHGLV 336
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Match: UPI0003F0D724 (cinnamoyl-CoA reductase 2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D724) HSP 1 Score: 87.0 bits (214), Expect = 1.040e-16 Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 2
Query: 20 LVDVRDAAEAHTRALMAPGAAGQR-LVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLMRRVSPRLRALRSPCDIGVPISLDNAKIKRVLGLEFRPIEETLVSMGHSLIRLGYVARTPAY 400
+VDVRD AE H +A+ P AAG+R ++C D W+ ++A +L EF GY VPTW P+ + +R + S +G DNA+++ VLG++ R I+ET++ M +S+I G+V + Y
Sbjct: 34 VVDVRDVAEGHVKAMTLPEAAGKRHIMCADN--IWMKEIAIILEDEFKSQGYNVPTWVSPDIGIKFFALFDKNVRLVVSA--LGKVTVFDNARMREVLGVQPRSIKETVIDMSYSIIEGGFVPKKSKY 157 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20420.1 >prot_S-ischiensis_contig9.20420.1 ID=prot_S-ischiensis_contig9.20420.1|Name=mRNA_S-ischiensis_contig9.20420.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=136bp MAPGAAGQRLVCVDTDMHWLPDVARVLSKEFGPLGYTVPTWTPPNFLARLback to top mRNA from alignment at S-ischiensis_contig9:346651..348480- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20420.1 ID=mRNA_S-ischiensis_contig9.20420.1|Name=mRNA_S-ischiensis_contig9.20420.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1830bp|location=Sequence derived from alignment at S-ischiensis_contig9:346651..348480- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:346651..348480- >mRNA_S-ischiensis_contig9.20420.1 ID=mRNA_S-ischiensis_contig9.20420.1|Name=mRNA_S-ischiensis_contig9.20420.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=816bp|location=Sequence derived from alignment at S-ischiensis_contig9:346651..348480- (Schizocladia ischiensis KU_0333)back to top |