mRNA_S-ischiensis_contig9.20416.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI) HSP 1 Score: 332 bits (852), Expect = 7.160e-110 Identity = 173/250 (69.20%), Postives = 197/250 (78.80%), Query Frame = 1
Query: 1 FLDRVLPTVAKALGL--EAGQGGISKAGRGVRAISLIKGVDSGPEGLTLISDKIRAGLGGLVPVGLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR 744
FL RVLPTVA+ALGL G G++ GR +RA+SLIKGVD GP+GL LISD IR GL G VP+GLAD+DY CR+ G V A+ D T LF+RPTFRVTVVR AS TVELCGALKNVVALGAAFCDGLGYGGNTKAAIVR GLAEM++FA+ F+ AS+RAFLESCG+GDLMTTCYGASRNR+CAEMFARE G R WE LE EELGGMKLQGPSTA EAF +I+ + +FPL++TIYR
Sbjct: 147 FLGRVLPTVAEALGLTKSGGTAGVAPGGRRIRAVSLIKGVDKGPDGLKLISDHIREGLCGAVPLGLADEDYASCRAAGLSVTADADTDTLRLLFNRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMQVFAQRLRCDASAFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 396
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE) HSP 1 Score: 320 bits (819), Expect = 4.130e-105 Identity = 174/272 (63.97%), Postives = 196/272 (72.06%), Query Frame = 1
Query: 1 FLDRVLPTVAKALGL--EAGQGGISKAGRGVRAISLIKGVDSGPEGLTLISDKIRAGLGGLVPV----------------------GLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR 744
FL RVLPTVA+ALGL G G + GR +RA+SLIKGVD GP+GL LISD IR GL G VPV GLAD+DY CR+ G V A+ D T LF+RPTFRVTVVR AS TVELCGALKNVVALGAAFCDGLGYGGNTKAAIVR GLAEM++FA+ F+ AS+RAFLESCG+GDLMTTCYGASRNR+CAEMFARE G R WE LE EELGGMKLQGPSTA EAF +I+ + +FPL++TIYR
Sbjct: 131 FLGRVLPTVAEALGLTKSGGNAGAAPGGRRIRAVSLIKGVDKGPDGLKLISDHIREGLCGAVPVSVLMGANVANEVARDELCESTLGLADEDYASCRAAGLSVTADADTDTLRLLFNRPTFRVTVVRDASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMQVFAQRLRCDASSFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 402
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: A0A674G7S5_TAEGU (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Taeniopygia guttata TaxID=59729 RepID=A0A674G7S5_TAEGU) HSP 1 Score: 186 bits (472), Expect = 1.590e-53 Identity = 117/245 (47.76%), Postives = 146/245 (59.59%), Query Frame = 1
Query: 82 GVRAISLIKGVDSGPEGLTLISDKIRAGL--------GGLVPVGLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR----------FVACLK 762
G ISLIKG+D GP GL LISD IR L G + +AD+ + ++GC T F L P FR+TVV S TVELCGALKN+VA+GA FCDGL +G NTKAA++R GL EM FA+ F G S FLESCGV DL+TTCYG RNR+ AE FAR G + E LE+E L G KLQGP T+ E +KI++ + + H+FPL +TIY+ F+ CL+
Sbjct: 135 GTFGISLIKGIDEGPHGLKLISDLIREQLKIEISVLMGANIAKEVADEKFCET-TIGCK--NETQGEIFKELMQTPNFRITVVLD-SDTVELCGALKNIVAVGAGFCDGLSFGDNTKAAVIRLGLMEMVAFAK-MFCKGP-----VSIATFLESCGVADLITTCYGG-RNRKVAEAFARTG--KSIEELEKEMLNGQKLQGPQTSAEVYKILKQKDMLHKFPLFTTIYKICYERRSIQDFITCLQ 366
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: UPI002026D7AE (LOW QUALITY PROTEIN: glycerol-3-phosphate dehydrogenase 1-like protein n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026D7AE) HSP 1 Score: 185 bits (470), Expect = 1.750e-53 Identity = 119/251 (47.41%), Postives = 150/251 (59.76%), Query Frame = 1
Query: 64 ISKAGRGVRAISLIKGVDSGPEGLTLISDKIRAGL--------GGLVPVGLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR----------FVACLK 762
+ K G ISLIKGVD GPEGL LISD IR L G + +AD+ + ++GC + +TF L P FR+TVV T VE+CGALKN+VA+GA FCDGLG+G NTKAA++R GL EM FA+ F G S FLESCGV DL+TTCYG RNR+ AE FAR G + E LE+E L G KLQGP T+ E +KI++ + L ++FPL +IY+ FV CL+
Sbjct: 106 LGKVKAGAIGISLIKGVDEGPEGLKLISDIIREKLKIEVSVLMGANIANEVADEKFCET-TIGCKNAEH--GKTFKELMQTPNFRITVVDDCDT-VEICGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFAK-LFCKGS-----VSINTFLESCGVADLITTCYGG-RNRKVAEAFARSG--KTIEELEKEMLNGQKLQGPQTSAEVYKILKQKNLINKFPLFVSIYQICYEXKSVKDFVTCLQ 343
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: A0A672TLV5_STRHB (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=10 Tax=Neognathae TaxID=8825 RepID=A0A672TLV5_STRHB) HSP 1 Score: 185 bits (469), Expect = 2.470e-53 Identity = 115/245 (46.94%), Postives = 145/245 (59.18%), Query Frame = 1
Query: 82 GVRAISLIKGVDSGPEGLTLISDKIRAGL--------GGLVPVGLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR----------FVACLK 762
G ISLIKG+D GPEGL LISD IR L G + +AD+ + ++GC F L P FR+TVV S TVE+CGALKN+VA+GA FCDGLG+G NTKAA++R GL EM FA+ R S FLESCGV DL+TTCYG RNRR AE FAR G + + LE E L G KLQGP T+ E +KI++ + + +FPL +T+Y+ F+ACL+
Sbjct: 112 GTFGISLIKGIDEGPEGLKLISDLIREKLKIEISVLMGANIAKEVADEKFCET-TIGCK--NEKQGEIFKELMQTPNFRITVVLD-SDTVEICGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFAKMFCRG------PVSTATFLESCGVADLITTCYGG-RNRRVAEAFARTG--KSIQELENEMLNGQKLQGPQTSAEVYKILKQKNMLDKFPLFTTVYKICYEGLSIQDFIACLQ 343
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: A0A7L1MXQ1_RHICY (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1MXQ1_RHICY) HSP 1 Score: 184 bits (466), Expect = 6.760e-53 Identity = 115/245 (46.94%), Postives = 145/245 (59.18%), Query Frame = 1
Query: 82 GVRAISLIKGVDSGPEGLTLISDKIRAGL--------GGLVPVGLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR----------FVACLK 762
G ISLIKG+D GP GL LISD IR L G + +AD+ + ++GC F L P FR+TVV+ S TVE+CGALKN+VA+GA FCDGL +G NTKAA++R GL EM FA+ R S FLESCGV DL+TTCYG RNRR AE FAR G + E LE+E L G KLQGP T+ E +KI++ + + H+FPL +TIY+ F+ CL+
Sbjct: 112 GTFGISLIKGIDEGPGGLKLISDVIREKLKIEISVLMGANLAKEVADEKFCET-TIGCK--NEKQGEIFKELLQTPNFRITVVQD-SDTVEICGALKNIVAVGAGFCDGLQFGDNTKAAVIRLGLMEMVAFAKMFCRGS------VSIATFLESCGVADLITTCYGG-RNRRVAEAFARTG--KSIETLEKEILNGQKLQGPQTSAEVYKILKQKNVLHKFPLFTTIYKICYEGQSVQDFITCLQ 343
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: W7U0Y7_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Y7_9STRA) HSP 1 Score: 185 bits (469), Expect = 9.220e-53 Identity = 117/258 (45.35%), Postives = 146/258 (56.59%), Query Frame = 1
Query: 1 FLDRVLPTVAKALGLEAGQGGISKAGRGVRAISLIKGVDSGPEGLTLISDKIRAGLGG-------LVPVGLADQ---DYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR 744
FL +LP ++ L RG A+SL+KG+D EG LI+D IR GLG L+ +AD+ D +LGC A +LF PTFRV V VELCGALKNVVAL A FCDGL +GGNTKAAI+R GL EMRLF + +P F ESCGV DL+TTCYG RNR+CAE FAR GG W+ +E+EELGG LQGP T + K+++ + RFPL ++Y+
Sbjct: 152 FLPGLLPRISSCLH------------RGAMAVSLVKGLDFDDEGPVLITDMIREGLGEDVSEVCVLMGANVADEMARDEFCEATLGCPDPEGAGA-VLQQLFDCPTFRVEVTPDP-IGVELCGALKNVVALAAGFCDGLDWGGNTKAAIIRRGLEEMRLFCKL-------LHPSVRDMTFFESCGVADLITTCYGG-RNRKCAETFARAGGTMAWDEIEKEELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQ 387
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: A0A091FMA6_9AVES (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=2 Tax=Cuculus canorus TaxID=55661 RepID=A0A091FMA6_9AVES) HSP 1 Score: 182 bits (463), Expect = 1.310e-52 Identity = 115/245 (46.94%), Postives = 145/245 (59.18%), Query Frame = 1
Query: 82 GVRAISLIKGVDSGPEGLTLISDKIRAGL--------GGLVPVGLADQDYLRCRSLGCLVGANTDARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR----------FVACLK 762
G ISLIKG+D GP+GL LISD IR L G + +AD+ + ++GC F L P FR+TVV S TVE+CGALKN+VA+GA FCDGL +G NTKAA++R GL EM FA+ R S FLESCGV DL+TTCYG RNRR AE FAR G + E LE+E L G KLQGP T+ E +KI++ + + +FPL +TIY+ F+ACL+
Sbjct: 98 GTFGISLIKGIDEGPDGLKLISDLIREKLKIEISVLMGANIAKEVADEQFCET-TIGCK--NKKQGEIFKELMQTPNFRITVVPD-SDTVEICGALKNIVAVGAGFCDGLKFGDNTKAAVIRLGLMEMVAFAKLFCRG------PVSIATFLESCGVADLITTCYGG-RNRRVAEAFARTG--KSIEELEKEMLNGQKLQGPQTSAEVYKILKQKNMLDKFPLFTTIYKICYEGQPIQEFIACLQ 329
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: A0A8J5XD68_DIALT (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XD68_DIALT) HSP 1 Score: 183 bits (465), Expect = 2.240e-52 Identity = 110/232 (47.41%), Postives = 147/232 (63.36%), Query Frame = 1
Query: 70 KAGRGVRAISLIKGVDSGPEGLTLISDKIRAGLGG-----LVPVGLADQDYLRCRSLGCLVGANTDA--RTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR 744
+ RG RA SLIKG++ G LISD I+ +GG L+ +A++ R VG +A R + R+F PTFRV+ ++ + VELCGALKNVVALGA FCDGLG GGNTKAAI+R GL E F + F G + FLESCGV DL+TTC+G RNR+CAE FA+ GG GW+ +E+E L G KLQG TA++ K+++ +G+ H+FPL+S I++
Sbjct: 147 RCARGARACSLIKGIEFDANGPVLISDIIKKKMGGMDVSVLMGANVANE-VARDEFCESTVGYRKEANGRAWQRVFDCPTFRVSKIKDVAG-VELCGALKNVVALGAGFCDGLGLGGNTKAAIIRVGLGETIQFCK-MFYGG------IKDQTFLESCGVADLVTTCFGG-RNRKCAEAFAKAGGKSGWDKIEKEMLNGQKLQGTITAQDVAKVLRKKGVAHKFPLLSKIHQ 368
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Match: UPI0018656BB9 (glycerol-3-phosphate dehydrogenase 1-like protein n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018656BB9) HSP 1 Score: 182 bits (462), Expect = 2.740e-52 Identity = 118/247 (47.77%), Postives = 148/247 (59.92%), Query Frame = 1
Query: 82 GVRAISLIKGVDSGPEGLTLISDKIRAGLGGLVPV--------GLADQDYLRCRSLGCLVGANT--DARTFFRLFHRPTFRVTVVRGASTTVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRAGLAEMRLFAENQFRSGEEFNPQASARAFLESCGVGDLMTTCYGASRNRRCAEMFAREGGARGWEVLEREELGGMKLQGPSTAEEAFKIIQAQGLHHRFPLISTIYR----------FVACLK 762
G ISLIKG+D GPEGL LISD IR +G V V +AD+ + C + +GA + F L P FR+TVV+ S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM FA F G+ S+ FLESCGV DL+TTCYG RNRR AE FA+ ++ E LE E L G KLQGP T+ E FKI+Q + + +FPL +Y+ F+ CL+
Sbjct: 112 GAIGISLIKGIDEGPEGLKLISDIIREKMGIDVSVLMGANIANEVADEKF--CETT---IGAKNHENGLIFKELLQTPNFRITVVK-ESDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFAR-MFCRGD-----VSSATFLESCGVADLITTCYGG-RNRRVAEAFAKS--SKSIEELEAEMLNGQKLQGPQTSAEVFKILQKRNMVEKFPLFVAVYQICFAGRAVNEFITCLQ 343 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20416.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20416.1 >prot_S-ischiensis_contig9.20416.1 ID=prot_S-ischiensis_contig9.20416.1|Name=mRNA_S-ischiensis_contig9.20416.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=255bp FLDRVLPTVAKALGLEAGQGGISKAGRGVRAISLIKGVDSGPEGLTLISDback to top mRNA from alignment at S-ischiensis_contig9:300949..304976+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20416.1 ID=mRNA_S-ischiensis_contig9.20416.1|Name=mRNA_S-ischiensis_contig9.20416.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4028bp|location=Sequence derived from alignment at S-ischiensis_contig9:300949..304976+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:300949..304976+ >mRNA_S-ischiensis_contig9.20416.1 ID=mRNA_S-ischiensis_contig9.20416.1|Name=mRNA_S-ischiensis_contig9.20416.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1530bp|location=Sequence derived from alignment at S-ischiensis_contig9:300949..304976+ (Schizocladia ischiensis KU_0333)back to top |