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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1110 |
| Cds size | 750 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817370.3369691-UTR-S-ischiensis_contig9:265113..265357 | 1622817370.3369691-UTR-S-ischiensis_contig9:265113..265357 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 265114..265357 + |
| 1695741062.813897-UTR-S-ischiensis_contig9:265113..265357 | 1695741062.813897-UTR-S-ischiensis_contig9:265113..265357 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 265114..265357 + |
| 1622817370.3648462-UTR-S-ischiensis_contig9:266107..266223 | 1622817370.3648462-UTR-S-ischiensis_contig9:266107..266223 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 266108..266223 + |
| 1695741062.8341558-UTR-S-ischiensis_contig9:266107..266223 | 1695741062.8341558-UTR-S-ischiensis_contig9:266107..266223 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 266108..266223 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817370.3536198-CDS-S-ischiensis_contig9:265357..266107 | 1622817370.3536198-CDS-S-ischiensis_contig9:265357..266107 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 265358..266107 + |
| 1695741062.823641-CDS-S-ischiensis_contig9:265357..266107 | 1695741062.823641-CDS-S-ischiensis_contig9:265357..266107 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 265358..266107 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20411.1 >prot_S-ischiensis_contig9.20411.1 ID=prot_S-ischiensis_contig9.20411.1|Name=mRNA_S-ischiensis_contig9.20411.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=250bp
MGLGDIREAPRDVFVATDDLAELGVLGSYPSFSLLDAGCLDDQSQAGSRP
RSFDLALPDVQLLSGEVSDHGLESFGSFNMADFIGDLSSRVPGSQLGRGR
EGRRSGESLLGFEDLTDFRVPGECPLEDTCLEIEQGLSPFRMPGVYYSSA
AAGEAEDHHTATVSRGFPGYDAGGRGGPRPLPASGSHLHQGFSDLPDNGR
LLQGGGGFLRGPGEVAVARCRGRSRHAPTVGPPGRPGRGRRGVPQLPRL* back to topmRNA from alignment at S-ischiensis_contig9:265114..266223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20411.1 ID=mRNA_S-ischiensis_contig9.20411.1|Name=mRNA_S-ischiensis_contig9.20411.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1110bp|location=Sequence derived from alignment at S-ischiensis_contig9:265114..266223+ (Schizocladia ischiensis KU_0333)
ACTGGGAGGTCCGCCGTTGGCGGCGGAAACGCTTGCCACACCACCTTCGC
GCGCGCGAGACCATCACCGATGGGACTCGCGTTCGAGGACGTCCATCGCG
GGGAGACTCGGCTCCGTTGCCGAGCGCCCAGAAACTCCGGAGAGGGCGCT
GCACGGGAAGAGGCGCATCCCTAGTTTCAAGCTGAACGACGAACACAGCA
GTCCGGCCAAGAAGCTCAAATGGAGGACCCCGAGCTTCCGCGGGATGGGC
TTGGGCGACATCCGGGAGGCGCCGCGAGATGTTTTCGTTGCGACCGACGA
CCTGGCCGAGCTGGGCGTCCTGGGATCATACCCCAGCTTTTCCCTCTTGG
ACGCCGGCTGCCTGGATGATCAGAGCCAGGCCGGGTCTCGGCCGCGCTCC
TTCGACCTGGCGCTGCCGGACGTCCAATTGCTGTCCGGTGAAGTGAGCGA
TCACGGTCTCGAATCCTTTGGGAGCTTCAACATGGCCGACTTCATTGGAG
ACCTTTCCTCCCGCGTCCCCGGCAGTCAACTCGGACGCGGTCGAGAAGGG
CGGAGGAGTGGTGAGTCCCTGCTTGGGTTTGAGGACCTCACTGATTTCCG
GGTACCCGGAGAGTGTCCCCTTGAGGACACCTGTCTTGAGATCGAGCAGG
GTCTCTCGCCGTTCCGCATGCCGGGCGTGTACTACAGCTCCGCCGCCGCG
GGGGAGGCCGAGGATCATCATACCGCAACGGTGAGCAGAGGTTTCCCGGG
GTACGACGCGGGCGGCCGCGGCGGCCCGCGGCCGCTCCCTGCATCCGGCA
GCCACCTCCACCAGGGCTTCAGCGACCTGCCAGACAACGGACGCCTCCTG
CAAGGCGGCGGGGGTTTCCTAAGGGGGCCCGGGGAGGTGGCGGTTGCCCG
GTGCCGGGGTCGAAGCCGGCACGCCCCTACCGTCGGACCCCCTGGACGGC
CTGGACGAGGACGACGAGGCGTACCCCAGCTCCCTCGACTTTGACGCCGA
GGCGGGGGGCACAAGCTTAGCCATGGCCATGGCGCCCAAGCCCGGCGGGT
TGCGGGAGCCCTTCCTGACCAAGCCCTTCCCCAACACGGCGGGCGGCTTT
TGGCGGGGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:265114..266223+ >mRNA_S-ischiensis_contig9.20411.1 ID=mRNA_S-ischiensis_contig9.20411.1|Name=mRNA_S-ischiensis_contig9.20411.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1500bp|location=Sequence derived from alignment at S-ischiensis_contig9:265114..266223+ (Schizocladia ischiensis KU_0333)
ATGGGCTTGGGCGACATCCGGGAGGCGCCGCGAGATGTTTTCGTTGCGAC
CGACGACCTGGCCGAGCTGGGCGTCCTGGGATCATACCCCAGCTTTTCCC
TCTTGGACGCCGGCTGCCTGGATGATCAGAGCCAGGCCGGGTCTCGGCCG
CGCTCCTTCGACCTGGCGCTGCCGGACGTCCAATTGCTGTCCGGTGAAGT
GAGCGATCACGGTCTCGAATCCTTTGGGAGCTTCAACATGGCCGACTTCA
TTGGAGACCTTTCCTCCCGCGTCCCCGGCAGTCAACTCGGACGCGGTCGA
GAAGGGCGGAGGAGTGGTGAGTCCCTGCTTGGGTTTGAGGACCTCACTGA
TTTCCGGGTACCCGGAGAGTGTCCCCTTGAGGACACCTGTCTTGAGATCG
AGCAGGGTCTCTCGCCGTTCCGCATGCCGGGCGTGTACTACAGCTCCGCC
GCCGCGGGGGAGGCCGAGGATCATCATACCGCAACGGTGAGCAGAGGTTT
CCCGGGGTACGACGCGGGCGGCCGCGGCGGCCCGCGGCCGCTCCCTGCAT
CCGGCAGCCACCTCCACCAGGGCTTCAGCGACCTGCCAGACAACGGACGC
CTCCTGCAAGGCGGCGGGGGTTTCCTAAGGGGGCCCGGGGAGGTGGCGGT
TGCCCGGTGCCGGGGTCGAAGCCGGCACGCCCCTACCGTCGGACCCCCTG
GACGGCCTGGACGAGGACGACGAGGCGTACCCCAGCTCCCTCGACTTTGA
ATGGGCTTGGGCGACATCCGGGAGGCGCCGCGAGATGTTTTCGTTGCGAC
CGACGACCTGGCCGAGCTGGGCGTCCTGGGATCATACCCCAGCTTTTCCC
TCTTGGACGCCGGCTGCCTGGATGATCAGAGCCAGGCCGGGTCTCGGCCG
CGCTCCTTCGACCTGGCGCTGCCGGACGTCCAATTGCTGTCCGGTGAAGT
GAGCGATCACGGTCTCGAATCCTTTGGGAGCTTCAACATGGCCGACTTCA
TTGGAGACCTTTCCTCCCGCGTCCCCGGCAGTCAACTCGGACGCGGTCGA
GAAGGGCGGAGGAGTGGTGAGTCCCTGCTTGGGTTTGAGGACCTCACTGA
TTTCCGGGTACCCGGAGAGTGTCCCCTTGAGGACACCTGTCTTGAGATCG
AGCAGGGTCTCTCGCCGTTCCGCATGCCGGGCGTGTACTACAGCTCCGCC
GCCGCGGGGGAGGCCGAGGATCATCATACCGCAACGGTGAGCAGAGGTTT
CCCGGGGTACGACGCGGGCGGCCGCGGCGGCCCGCGGCCGCTCCCTGCAT
CCGGCAGCCACCTCCACCAGGGCTTCAGCGACCTGCCAGACAACGGACGC
CTCCTGCAAGGCGGCGGGGGTTTCCTAAGGGGGCCCGGGGAGGTGGCGGT
TGCCCGGTGCCGGGGTCGAAGCCGGCACGCCCCTACCGTCGGACCCCCTG
GACGGCCTGGACGAGGACGACGAGGCGTACCCCAGCTCCCTCGACTTTGA back to top
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