mRNA_S-ischiensis_contig9.20401.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20401.1
Unique NamemRNA_S-ischiensis_contig9.20401.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 5.680e-110
Identity = 205/288 (71.18%), Postives = 234/288 (81.25%), Query Frame = 1
Query:    1 TSFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLA-------------------RATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMARDLSRQS 807
            TSF AAK FA+ECF +LP K+HWRLYLEIADLA+RENRF EARKLYRKVTK+QPFASQGW+EY KLEEE GDL++C+QILRRGL FCEYSE+LLIKA+K +E+ G LDGARELLSRLKHVGIE VWRTVLEGALLEAR+GN D++RK   YLMTHVPWYGPIYYEAFRLEEKAE FE AL IV    XXXXXXXXXXXXXXXXXXX  MRDAK +L  G+ P  A                   RA + ++KAKDCISKELVWKVHFEAAQ++ERLAS+ A++++ +S
Sbjct:   70 TSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATSDASRRGQMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIATRS 357          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 5.310e-107
Identity = 208/301 (69.10%), Postives = 236/301 (78.41%), Query Frame = 1
Query:    1 TSFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRK--VTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLA------------------------------RATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMARDLSRQS 807
            TSF AAK FA+ECF +LP K+HWRLYLEIADLA+RENRF EARKLYRK  VTK+QPFASQGW+EY KLEEE GDL++C+QILRRGL FCEYSE+LLIKA+K +E+ G LDGARELLSRLKHVGIE VWRTVLEGALLEAR+GN D++RK   YLMTHVPWYGPIYYEAFRLEEKAE FE AL IV    XXXXXXXXXXXXXXXXXXXLDMRDAK +LA G+ P  A                              RA + ++KAKDCISKELVWKVHFEAAQ++ERLAS+ A+ ++ +S
Sbjct:  234 TSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKASVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXLDMRDAKKALAEGKSPFEAYQQRATSDPSTRGQGGXXXXXXXXKVVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKAIATRS 534          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK)

HSP 1 Score: 271 bits (693), Expect = 5.710e-88
Identity = 153/217 (70.51%), Postives = 179/217 (82.49%), Query Frame = 1
Query:    4 SFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLAR 654
            SF AAK FA  CF+ LP K+HWRLYLEIA+L+KRENRF EAR+LY+KV +LQP+A+QGWLEY+KLEEE G L  C++IL RGLMFC YSESLLIKAIKH E++G+L  AR LL+RLK  G+EKVWRTVLEGALLEARAG   ++RK F YLM  VPWYGPIY+EAFRLEEK E F  AL+I+E GL XXXXXXXXXXXXXXX    D+R+A+A+L R
Sbjct:   46 SFAAAKAFAATCFDRLPQKVHWRLYLEIAELSKRENRFEEARQLYQKVCRLQPYAAQGWLEYAKLEEEGGHLETCSRILHRGLMFCHYSESLLIKAIKHFERLGQLRPARVLLARLKRAGVEKVWRTVLEGALLEARAGRSAVARKVFKYLMQQVPWYGPIYFEAFRLEEKNEHFRSALQIIERGLAXXXXXXXXXXXXXXXCERADLREAEAALRR 262          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 284 bits (726), Expect = 5.710e-84
Identity = 166/261 (63.60%), Postives = 202/261 (77.39%), Query Frame = 1
Query:    4 SFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMA 786
            SF AAK++A+ CF +LP ++HW++ LE+ADLAKRENR  EAR+LYR+V +LQP A+Q WL YS++EEECGD+ +   IL++GL+FCEYSESLL +A+KH E+ G L  AR LLSRL+HV I+KVWRTVLEGALLEARAGN  ++RK F YL+  VPWYGPIY EAFRLEEK +    AL IVE GL XXXXXXXXXXXXXXXXXX      K ++A G VP L R   M+ +A   ISKEL+WKVHFEAAQ++ER AS  A
Sbjct:  623 SFEAAKDYAIACFELLPLRVHWKILLELADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDVERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNNRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIVERGLKXXXXXXXXXXXXXXXXXXXXXDAGKDAVAHGLVPDLPRTRDMISRALGSISKELIWKVHFEAAQIEERAASTAA 883          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA)

HSP 1 Score: 276 bits (707), Expect = 2.550e-81
Identity = 162/272 (59.56%), Postives = 201/272 (73.90%), Query Frame = 1
Query:    1 TSFMAAKNFALECFN-----------ILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLASMM 783
            +SF+ A+ FAL               +LP ++HWR++LE+ADLAKR N+F EAR++YRKV  LQP+ASQGWLE+SKLEEE G+L +CA +L  GL +CEY+E+LL KAIKH+E+MG L  AR+LL+RLKHVGIEKVWRTVLEGALLEARAGN+ M+R+   YLM HVPWYGP+Y EA+RLE  A+    AL IVE GL XXXXXXXXXXXXXXX   +D+ D           +L R ++MLD+A   IS+EL+WKVH EAAQ QER A M+
Sbjct: 1025 SSFVEAEEFALRSLGNDEDKTVVEAAVLPKQVHWRVHLELADLAKRANKFDEARRVYRKVCTLQPYASQGWLEFSKLEEESGNLERCASLLSEGLSYCEYNENLLTKAIKHEERMGNLTRARQLLARLKHVGIEKVWRTVLEGALLEARAGNVGMARRVLKYLMHHVPWYGPLYLEAYRLERDADRPIEALAIVERGLSXXXXXXXXXXXXXXXCEGMDIADGAL--------ELPRTSQMLDRATKSISRELLWKVHLEAAQAQERAALMV 1288          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.430e-79
Identity = 161/261 (61.69%), Postives = 194/261 (74.33%), Query Frame = 1
Query:    4 SFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMA 786
            SF AAK++A+ CF +LP K+HW+L+LE+ADLAKRENR  EAR+LYR+V +LQP A+Q WL YS++EEECGD+ +   IL++GL+FCEYSESLL +A+KH E+ G L  AR LLSRL+HV I+KVWRTVLEGALLEARAGN  ++RK F YL+  VPWYGPIY EAFRLEEK +    AL IVE GL  XXXXXXXXXXXXXXXXX                   R   M+ +A   ISKEL+WKVHFEAAQ++ER AS  A
Sbjct:  973 SFEAAKDYAMACFELLPLKVHWKLFLELADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDMERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNDRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIVERGLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRDMIFRALGSISKELIWKVHFEAAQIEERAASTAA 1233          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7S2Y4L6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4L6_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.450e-79
Identity = 153/259 (59.07%), Postives = 188/259 (72.59%), Query Frame = 1
Query:    4 SFMAAKNFALECFN--ILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLA 774
            SF  A+  A E      LP+ +HWR+YLE+ADLA+R NR+ E+RKLY+KV +LQPFASQGWLEYSKLEE+CG + + + IL  GL +CEYSE+LL +A+KHQEKMG L  AR +L+RLKHVGI+KVWRTVLEGALLEARAGN DM+R+   YLM HVPWYGP+Y EA++LE        A+ IVE GL  XXXXXXXXXXXXX    +D+ + +          L R   M+++AK  ISKELVWK+H EAA M ER A
Sbjct:   18 SFQKAEALAQEALKDGSLPESIHWRVYLELADLARRSNRYVESRKLYQKVCQLQPFASQGWLEYSKLEEDCGFMNRVSNILHAGLEYCEYSETLLTRAVKHQEKMGNLSSARGILARLKHVGIDKVWRTVLEGALLEARAGNHDMARRVLKYLMHHVPWYGPLYLEAYKLERDQGHPMDAMHIVERGLTTXXXXXXXXXXXXXLYEEMDVTERQF--------HLPRTMHMIERAKSTISKELVWKLHLEAAHMLERTA 268          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: F0ZHK8_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHK8_DICPU)

HSP 1 Score: 254 bits (650), Expect = 5.900e-76
Identity = 131/251 (52.19%), Postives = 174/251 (69.32%), Query Frame = 1
Query:   16 AKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQER 768
            A +FA +  N+LP+K+HWR+YLE+ADLA R+N    ARK YRKVT  QP+ SQGWLEY+K+EE+ G L KC +IL+ GL  C Y+ESLLIK I+H+EKM  L+GAR LLS+L+   I K WR V+EG LLEARAGN+D++RK F YLM HVPWYGPIY EA++LEE+ EE+ERA+ IVE GL                   L  + +   L      Q  R+T  +++A+  +S+E+ WK++FEAAQ++ER
Sbjct:  213 AMDFAFQSLNVLPEKVHWRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGLKHCPYNESLLIKGIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYGPLWFSALR----LYEKTSHGFL------QATRST--VERARQAVSREVTWKIYFEAAQIEER 451          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7R9VVS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVS4_9STRA)

HSP 1 Score: 235 bits (600), Expect = 2.340e-75
Identity = 112/156 (71.79%), Postives = 134/156 (85.90%), Query Frame = 1
Query:   43 NILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLE 510
            N LP ++HWR++LE+ADLAKR NRF EAR+LYRKV  LQP+ASQGWLE+SKLEEE GDL KCA +L  GL +CEY+E+LL KAIKH+E+MG L  AR+LL+RLKHVGIE+VWRTVLEGALLEARAGN+ M+R+   YLM HVPWYGP+Y EA+RLE
Sbjct:    2 NTLPKQLHWRVHLELADLAKRANRFDEARRLYRKVCTLQPYASQGWLEFSKLEEESGDLDKCACLLNEGLSYCEYNENLLTKAIKHEERMGDLTRARQLLARLKHVGIEQVWRTVLEGALLEARAGNVAMARRVLKYLMHHVPWYGPLYLEAYRLE 157          
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA)

HSP 1 Score: 256 bits (655), Expect = 6.060e-75
Identity = 168/336 (50.00%), Postives = 202/336 (60.12%), Query Frame = 1
Query:    4 SFMAAKNFALECF-------------NILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLD----MRDAKASLARG-------------------------------------------------------------EVPQ---LARATKMLDKAKDCISKELVWKVHFEAAQMQER 768
            SF AA+ +A +C              + LP+++HWR+YLE+ADLAKRENRF EAR+LYR V KLQP+A QGWLEYSK+EEECG L  C +IL  GL +C +SESLL KAIKH+E+MG L  AR LL RL+H+ ++K WRT+LEGALLEAR GN+ ++RK F YLM +VPWYGPIYYEA R EEK EEF RA+ IVESGL  XXXXXXXXXXXXXXXX ++    + D K   AR                                                              EVP+   L      L +A +CISKELVWKVHFEAAQ+ ER
Sbjct:  350 SFEAAQKYANQCLQPEQYVGSGEANPHSLPEELHWRIYLEMADLAKRENRFTEARRLYRTVNKLQPYAPQGWLEYSKMEEECGRLHHCQKILHEGLQWCNFSESLLTKAIKHEERMGNLVAARALLGRLRHIHVDKAWRTILEGALLEARTGNVVVARKVFKYLMRNVPWYGPIYYEAARFEEKNEEFTRAISIVESGLSEXXXXXXXXXXXXXXXXSMEWIQAINDLKTQNARKMPATTTGINGTKVGGSNKSSKVVKTNNVQILANTADVNVNNSENPDMELYYRFGIPTDVFPEVPEFIDLLNTRGALQRAMNCISKELVWKVHFEAAQVAER 685          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI5.680e-11071.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEQ7_9PHAE5.310e-10769.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DG20_HETAK5.710e-8870.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TFT0_9STRA5.710e-8463.60Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S4ITD3_9STRA2.550e-8159.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9D155_9STRA1.430e-7961.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2Y4L6_9STRA1.450e-7959.07Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
F0ZHK8_DICPU5.900e-7652.19Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A7R9VVS4_9STRA2.340e-7571.79Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A6S8EA78_9STRA6.060e-7550.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:208161..213143 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.0
Seed ortholog evalue6.2e-95
Seed eggNOG ortholog2880.D8LN71
EggNOG OGs28JG8@1,2QRVD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size816
Cds size807
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20401.1prot_S-ischiensis_contig9.20401.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 208161..213134 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817375.626514-CDS-S-ischiensis_contig9:208160..2082411622817375.626514-CDS-S-ischiensis_contig9:208160..208241Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 208161..208241 -
1695741065.8337584-CDS-S-ischiensis_contig9:208160..2082411695741065.8337584-CDS-S-ischiensis_contig9:208160..208241Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 208161..208241 -
1622817375.6409235-CDS-S-ischiensis_contig9:208919..2090321622817375.6409235-CDS-S-ischiensis_contig9:208919..209032Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 208920..209032 -
1695741065.847306-CDS-S-ischiensis_contig9:208919..2090321695741065.847306-CDS-S-ischiensis_contig9:208919..209032Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 208920..209032 -
1622817375.6518462-CDS-S-ischiensis_contig9:209409..2095361622817375.6518462-CDS-S-ischiensis_contig9:209409..209536Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 209410..209536 -
1695741065.8585458-CDS-S-ischiensis_contig9:209409..2095361695741065.8585458-CDS-S-ischiensis_contig9:209409..209536Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 209410..209536 -
1622817375.6689167-CDS-S-ischiensis_contig9:210707..2108301622817375.6689167-CDS-S-ischiensis_contig9:210707..210830Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 210708..210830 -
1695741065.8702247-CDS-S-ischiensis_contig9:210707..2108301695741065.8702247-CDS-S-ischiensis_contig9:210707..210830Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 210708..210830 -
1622817375.6821797-CDS-S-ischiensis_contig9:211765..2119361622817375.6821797-CDS-S-ischiensis_contig9:211765..211936Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 211766..211936 -
1695741065.881413-CDS-S-ischiensis_contig9:211765..2119361695741065.881413-CDS-S-ischiensis_contig9:211765..211936Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 211766..211936 -
1622817375.6940715-CDS-S-ischiensis_contig9:212547..2126881622817375.6940715-CDS-S-ischiensis_contig9:212547..212688Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 212548..212688 -
1695741065.8922966-CDS-S-ischiensis_contig9:212547..2126881695741065.8922966-CDS-S-ischiensis_contig9:212547..212688Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 212548..212688 -
1622817375.7048888-CDS-S-ischiensis_contig9:213083..2131341622817375.7048888-CDS-S-ischiensis_contig9:213083..213134Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 213084..213134 -
1695741065.901597-CDS-S-ischiensis_contig9:213083..2131341695741065.901597-CDS-S-ischiensis_contig9:213083..213134Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 213084..213134 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817375.7178574-UTR-S-ischiensis_contig9:213134..2131431622817375.7178574-UTR-S-ischiensis_contig9:213134..213143Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 213135..213143 -
1695741065.9107556-UTR-S-ischiensis_contig9:213134..2131431695741065.9107556-UTR-S-ischiensis_contig9:213134..213143Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 213135..213143 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20401.1

>prot_S-ischiensis_contig9.20401.1 ID=prot_S-ischiensis_contig9.20401.1|Name=mRNA_S-ischiensis_contig9.20401.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=269bp
MAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQ
PFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEK
MGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLM
THVPWYGPIYYEAFRLEEKAEEFERALEIVESGLREIPRYGPLWFGAFRL
SEKLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQM
QERLASMMARDLSRQSRTQ
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mRNA from alignment at S-ischiensis_contig9:208161..213143-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20401.1 ID=mRNA_S-ischiensis_contig9.20401.1|Name=mRNA_S-ischiensis_contig9.20401.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4983bp|location=Sequence derived from alignment at S-ischiensis_contig9:208161..213143- (Schizocladia ischiensis KU_0333)
ACCTCCTTTATGGCCGCAAAGAACTTTGCCCTCGAGTGCTTCAACATACT GCCGGACAAGGTGAGTCTTATACTTGTGATGTCGTTAGATATTCTTTCTG CCAGAGGATATTGCACTGTAGTACGAAGTACTGTACCTCGTACTTGTAGG GGGGTGGCAAAGAGTGAAGAGGTGTCCCTGCTCTACCCTACGCGAGTTGT TTTGCAACGAAGAGTTGTACGTACGGGCATAAGTGTCTCTATATTGACCG CATGGTGTGCTGGGCATGAAACAGGTGCACTGGCGTCTGTACCTGGAGAT AGCCGACCTTGCCAAGAGAGAGAACCGCTCCGTAGTACCAGTACCAGTAA GTATATGGCCAGCACAGTGTACATACAGACATATGCAAGTGTGTGTATGT ATCTCTATGTTGACCGCATGCCGTGCTCGGCGTGGAACAAATACTGTGCA CATAGATGCACTGGCGTCTGTACCTGGAGATAGCGGACCTGGCCAAGAGG GAGAACCGCTTTGGGGAGGCAAGAAAGCTCTACCGGAAGGTCACCAAGCT GCAGCCCTTCGCCAGCCAGGGGTGGCTGGAGTACTCCAAGCTCGAGGTGA GTATACACTTGCTTCTACTGTGCTGTTAAGAGTTTTGTGCATGAGGATGT AGAAGCGAGTGGGAAAGATGAGGTGTCTCTACTCACGCGAGTTAAGAGTT ATAGGGTGATGCCGTAACTGCCATGCTTGGAAGCGCGGTGGCCACCCCCT CCCACCCTGGCTCTACCAGGGGAGGGGGGGGTCTTGCTCCGTCTCGATGG AGGCGCAGGGTCAATGGTCTCGGGAATACGGCAAGCACAGCGTGAGTACA TATGTATACAGCACTGGAGTATATATAGGTTACTGCATACTCACGACCGA GGCGCGTGGTCAATGGTCTCGAGACTACGGCAAGCACAACGTAGTACATA TATATGTAGCAGTTGGGTTTTGCTCTTTTTTTCCTGCTCTGTTGCTGTTG ATTCGATGGGCTCCGTCTGCAGTCGTGTACCCGGCACATTGTGAGAATGT GAAGTGCTCCGTGGGCTCGGGTCATTGGGGAAGCCGAGGCACGTTTTCGT GTTAACCGTGTTCCTTGACGTGTTGTATGGCAGTAAGTTATCATATAACA GCCATTCTCGCTTGTGGGCGACGACTGTTCTCATGCGAATGTTGCGCTGT ACTGCAGGAGGAGTGTGGCGACCTGGCAAAGTGCGCACAGATACTGCGGC GGGGACTGATGTTTTGTGAGTACTCCGAGTCTTTGCTGATCAAGGCCATC AAGCACCAGGAGAAGATGGGCCGGCTGGACGGCGCAAGGGAGCTGCTCAG CAGGCTCAAGCACGTGGGCATCGAGAAGGTAAGTGTGATGTGATGTGATG TGTACTCTAATGTGCAGTAGTTTGACATCACATCACATCACATCACATGA CGGCGCAAGGGAGCTGCTCAGCAGGCTCAAGCACGTGGGCATCGAGAAGG TAAGTGTGATGTGATGTGTGGTCTAATGTGCAGTAGTTTGACATCACATC ACATGATAGTGCGAGAGAGCTGCTCAGCAGGCTCAAGCACGTGGGCATCG AGAAGGTGCGAGTACAGCGCAGGCCAATGGCCGAAAGGCTACCCTGCGGG GGTGTTATTGGGTAATGTGATGTGATGTGACCGTTAGGGTGCCGGTGCGC CCAAGAGCGCCTCTGCGAAGAGACCCACAGGTACTTTGAAGTACTCGCTG ATGTCTGTGCTTTGTCGTAGTCTGGCGAGAGGCCCCTCATCCGGCTTGCC GACGCCAAGACATATTGGCCTTCCGGGCTTGGCCAGTACGCGGCCTGGCC AAGGAGGTGCAAACCCGCCATGCTCCGTCCCGACCAAGTTGGGATGTGAG AGTTCATGGCTCAATAGCTACTCCTGTAGGAGGGCAAACCCGAAGTTTCA ACTTAGGGCTGTCGGCAATGCATGCAAGGTTATGTCATAAGACAAGCCAA TGAGTGCATACTTCGAAGTATACATATGTACTTCGTAGTCCGTGCACTGA AATAGAGATCCAAACGATGCTAGTGACGTGCAGGCCGCATCACTACAAAC AACTTCGTACTGTACAAGTGTGGACGTTCCTTTGCTCGCAACCTTGTGCA CAGTTGTGTTGATAAATACCGTACTTGTACTGTACTGTACTGTACTCTCC ACTTGCTACAATTGTACGGTACAAGTGTGGACATTGCTCTGCTCGCAACA TTGTGTACTATTGTACATCTGTGTTGATAAATACCGTGCTTGTACTGTAC TCTCCACTTGCAGGTGTGGCGTACGGTGCTGGAGGGCGCACTGCTGGAGG CACGTGCGGGCAACATGGACATGTCCCGCAAGTTCTTCAACTACCTCATG ACACACGTGCCCTGGTACGGCCCCATATACTACGAGGTGAGCATATGCTA CGAGGTGAGCATGCAGAATTCTTCAATTATCTCATGACGCACGTGCCCTG GTACGGCCCCATATAATATGAGGTGAGCGACATGTACACACATAGGTACA GGTAGTAGAACGGTACTGTAGTATTATCAGGAACAACACAGGGCGAGGTG CAGGCCACGTCACTAAAGGCCTCAACAGTGGCCCTTCCTTAGCTCGCCAG GGAAGTTTGAGTGGGGAAGGGGAGAAGGAGGGGGAGGAGGAAGAGGGGGA GGAGGGGAAGTACTAGTGCAGACTACCAAGGATAGTGTTGAGTATTGAGG CACGCACGTGCCGTCTGGTACCATGCACCACTCTGTGCTGGAACTACAAG GTTACTTCACTATATTACAGTACACCTGCTCCGTCTCGACCGAGGCGTGT TCAGTGGTCTCGGGTCTATGGCAAGCAACATGTGAATAATATATATACTT CCAGCAGCAGAGCGGCCTGGCCGGTGCAAACCCGGAATGCCCCGGCCCGG CCTAAACAGGGTGCGAGATTCCATGGCTTAATAGCTACTCCTGTCGGAGG GCAAACCCAAAGCTTCGAATTGGGGCTGCCGGCATTGCACGCAAGGCTAT GTCACAAGACAAGCCAATGAGTAAGTACATACGTTGAGTAGTGTGTGTAC AGTACGTACGTGATTCCGCGTACATGATGCGCTATTGTAGCTAGCTGCAG GCTGGGGGGAGAAAATTCCCTGGAAGGTGGCAGCTCTCTGCCAGATGTAT ACTACTGTACTGTACGAGTATCTGTGCAGTACAAGTCCTCAACACAAACT CGCAGAAATAGGAACAACGGGGGTGTGATTGTGGTACTTGGAAGTACAAT ATGAGTGGCAACGTAGCCCTACCCAATGCGTGTCTGTCTGTGTGTCTGTC GGTGGCATCGGTACAATATGAGTGCCAACTTGGCCCTAATCAGTGCGGTT TGTCTCTGTGTCTGTCTGTCTGTCGGTAGCACTAGCCAATGCGGTGTGTC TGCGTGTCTGTCCGTCTGTCTGTCTATTGTGGTAAAGTATGAGTGCCAAC TTAGCCGTAACCAATGCAGTTTTTCTGTGCCTGTCTGTCTGTCGGTGGCA CTAACCAATGCCTTTTTTTCTGTCTGTCTGTCTGTCTTGTCTACCTGTGT GTGGCAGGCCTTCCGCCTGGAGGAGAAGGCGGAAGAGTTTGAGCGCGCCC TGGAGATTGTGGAGAGCGGTCTGCGGGAGATCCCCCGCTACGGTCCACTC TGGTTCGGGGCTTTCCGCCTCAGCGAGAAGCTTGGTAAGTTACTTGAGAC GTACAGTTACTCGTATCTTTAGCAATGAGTTTTTTTTTTTTTTTTTTTCG GTGAGAAGCTTGGTAAGTTAATTGAGACGTACATTTGCTTCATGTGCTTG GAAGCACTCGTATCTTTATCGACGAGCTATTTTCTGTACAACTGTACTCT GTACAGTACTTTGTGGTTAGCGTATCTTTGTTGGCGTGCTATTTCATGTA CAACTGTACCCTATACAGTGCAGTAAGTCGTTCCTCGTGGTTGCACATTG TGTGTGATCGGCTCGTACAGGGGTGGTACATATTGTGGTGGAGTAGGGGT ATTGAGAGTGCACCTTCACCGTACAGCTCTCACGTGTGATGTGGTGTGAT GTGATTGTCAGACATGCGGGATGCCAAGGCCAGCCTGGCGAGGGGGGAGG TGCCCCAGCTGGCAAGGGCCACGAAAATGCTGGACAAGGCCAAGGACTGC ATCAGCAAGGAGCTGGTTTGGAAGGTCAGCCTACTTAAACCGTTTGGTAC TTCATCGCAAGTGCTTAGAGACATTCAGCTGTACTGTATATATATTTCAT ATATGTACTCACATTGTGCTTGCCGTAGTGCCGAGACCATTGACCATGCG CCTCGATCGAGACGGAGCAGATATTATATCGCATTATCAGCACTTGTGCT CACGCCTTCCTGGTGTATGTCGCATCACTATTGCTGCGGTGCACTTTGAG GCGGCGCAGATGCAGGAGCGCCTGGCTGATGACCCTTCTCTCTATCTCTC TCTATATATATATGTGTATCGATGGTTGATATTCGATAGTTTGACCCCCA TCAAATCCAAGCACCTAGTTAGGAGCGCCACCCACAAAATCGCGAAAGTA GGATCACCTCTATTTGCCGCTCGCTTCTTCTCTTCATACACAAATCACCT CTATTTGCCGCTCGCTTCTTCTCTTCATACACAAAAGTCAGTCGAGCTCA ATAACTATCTACTGACCGTATTCCATTGCCGCAGCATGGCTGCAGGTGCA TTTCGAGGCGGCGCAGATGCAGGAGCGGCTGGCGAGCATGATGAGCCATG AACATATACTTGCAAGTACTATATTTTATCGCGTCATCAGCACTTCATCA GCACTTCTGCTCACACACACCTTCCTGTTGTGTGACGCATTCATTGCCGC AGGTGCACTTTGAGGCGGCGCAGATGCAGGAGCGGCTCGCGAGCATGATG GCGCGGGACCTCTCGCGACAGTCGCGCACGCAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:208161..213143-

>mRNA_S-ischiensis_contig9.20401.1 ID=mRNA_S-ischiensis_contig9.20401.1|Name=mRNA_S-ischiensis_contig9.20401.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1614bp|location=Sequence derived from alignment at S-ischiensis_contig9:208161..213143- (Schizocladia ischiensis KU_0333)
ATGGCCGCAAAGAACTTTGCCCTCGAGTGCTTCAACATACTGCCGGACAA
GATGGCCGCAAAGAACTTTGCCCTCGAGTGCTTCAACATACTGCCGGACA
AGATGCACTGGCGTCTGTACCTGGAGATAGCGGACCTGGCCAAGAGGGAG
AACCGCTTTGGGGAGGCAAGAAAGCTCTACCGGAAGGTCACCAAGCTGCA
GCCCTTCGCCAGCCAGGGGTGGCTGGAGTACTCCAAGCTCGAGATGCACT
GGCGTCTGTACCTGGAGATAGCGGACCTGGCCAAGAGGGAGAACCGCTTT
GGGGAGGCAAGAAAGCTCTACCGGAAGGTCACCAAGCTGCAGCCCTTCGC
CAGCCAGGGGTGGCTGGAGTACTCCAAGCTCGAGGAGGAGTGTGGCGACC
TGGCAAAGTGCGCACAGATACTGCGGCGGGGACTGATGTTTTGTGAGTAC
TCCGAGTCTTTGCTGATCAAGGCCATCAAGCACCAGGAGAAGATGGGCCG
GCTGGACGGCGCAAGGGAGCTGCTCAGCAGGCTCAAGCACGTGGGCATCG
AGAAGGAGGAGTGTGGCGACCTGGCAAAGTGCGCACAGATACTGCGGCGG
GGACTGATGTTTTGTGAGTACTCCGAGTCTTTGCTGATCAAGGCCATCAA
GCACCAGGAGAAGATGGGCCGGCTGGACGGCGCAAGGGAGCTGCTCAGCA
GGCTCAAGCACGTGGGCATCGAGAAGGTGTGGCGTACGGTGCTGGAGGGC
GCACTGCTGGAGGCACGTGCGGGCAACATGGACATGTCCCGCAAGTTCTT
CAACTACCTCATGACACACGTGCCCTGGTACGGCCCCATATACTACGAGG
TGTGGCGTACGGTGCTGGAGGGCGCACTGCTGGAGGCACGTGCGGGCAAC
ATGGACATGTCCCGCAAGTTCTTCAACTACCTCATGACACACGTGCCCTG
GTACGGCCCCATATACTACGAGGCCTTCCGCCTGGAGGAGAAGGCGGAAG
AGTTTGAGCGCGCCCTGGAGATTGTGGAGAGCGGTCTGCGGGAGATCCCC
CGCTACGGTCCACTCTGGTTCGGGGCTTTCCGCCTCAGCGAGAAGCTTGG
CCTTCCGCCTGGAGGAGAAGGCGGAAGAGTTTGAGCGCGCCCTGGAGATT
GTGGAGAGCGGTCTGCGGGAGATCCCCCGCTACGGTCCACTCTGGTTCGG
GGCTTTCCGCCTCAGCGAGAAGCTTGACATGCGGGATGCCAAGGCCAGCC
TGGCGAGGGGGGAGGTGCCCCAGCTGGCAAGGGCCACGAAAATGCTGGAC
AAGGCCAAGGACTGCATCAGCAAGGAGCTGGTTTGGAAGACATGCGGGAT
GCCAAGGCCAGCCTGGCGAGGGGGGAGGTGCCCCAGCTGGCAAGGGCCAC
GAAAATGCTGGACAAGGCCAAGGACTGCATCAGCAAGGAGCTGGTTTGGA
AGGTGCACTTTGAGGCGGCGCAGATGCAGGAGCGGCTCGCGAGCATGATG
GCGCGGGACCTCTCGCGACAGTCGCGCACGCAGGTGCACTTTGAGGCGGC
GCAGATGCAGGAGCGGCTCGCGAGCATGATGGCGCGGGACCTCTCGCGAC
AGTCGCGCACGCAG
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