mRNA_S-ischiensis_contig9.20401.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI) HSP 1 Score: 352 bits (902), Expect = 5.680e-110 Identity = 205/288 (71.18%), Postives = 234/288 (81.25%), Query Frame = 1
Query: 1 TSFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLA-------------------RATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMARDLSRQS 807
TSF AAK FA+ECF +LP K+HWRLYLEIADLA+RENRF EARKLYRKVTK+QPFASQGW+EY KLEEE GDL++C+QILRRGL FCEYSE+LLIKA+K +E+ G LDGARELLSRLKHVGIE VWRTVLEGALLEAR+GN D++RK YLMTHVPWYGPIYYEAFRLEEKAE FE AL IV XXXXXXXXXXXXXXXXXXX MRDAK +L G+ P A RA + ++KAKDCISKELVWKVHFEAAQ++ERLAS+ A++++ +S
Sbjct: 70 TSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATSDASRRGQMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIATRS 357
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE) HSP 1 Score: 347 bits (890), Expect = 5.310e-107 Identity = 208/301 (69.10%), Postives = 236/301 (78.41%), Query Frame = 1
Query: 1 TSFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRK--VTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLA------------------------------RATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMARDLSRQS 807
TSF AAK FA+ECF +LP K+HWRLYLEIADLA+RENRF EARKLYRK VTK+QPFASQGW+EY KLEEE GDL++C+QILRRGL FCEYSE+LLIKA+K +E+ G LDGARELLSRLKHVGIE VWRTVLEGALLEAR+GN D++RK YLMTHVPWYGPIYYEAFRLEEKAE FE AL IV XXXXXXXXXXXXXXXXXXXLDMRDAK +LA G+ P A RA + ++KAKDCISKELVWKVHFEAAQ++ERLAS+ A+ ++ +S
Sbjct: 234 TSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKASVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXLDMRDAKKALAEGKSPFEAYQQRATSDPSTRGQGGXXXXXXXXKVVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKAIATRS 534
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK) HSP 1 Score: 271 bits (693), Expect = 5.710e-88 Identity = 153/217 (70.51%), Postives = 179/217 (82.49%), Query Frame = 1
Query: 4 SFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLAR 654
SF AAK FA CF+ LP K+HWRLYLEIA+L+KRENRF EAR+LY+KV +LQP+A+QGWLEY+KLEEE G L C++IL RGLMFC YSESLLIKAIKH E++G+L AR LL+RLK G+EKVWRTVLEGALLEARAG ++RK F YLM VPWYGPIY+EAFRLEEK E F AL+I+E GL XXXXXXXXXXXXXXX D+R+A+A+L R
Sbjct: 46 SFAAAKAFAATCFDRLPQKVHWRLYLEIAELSKRENRFEEARQLYQKVCRLQPYAAQGWLEYAKLEEEGGHLETCSRILHRGLMFCHYSESLLIKAIKHFERLGQLRPARVLLARLKRAGVEKVWRTVLEGALLEARAGRSAVARKVFKYLMQQVPWYGPIYFEAFRLEEKNEHFRSALQIIERGLAXXXXXXXXXXXXXXXCERADLREAEAALRR 262
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA) HSP 1 Score: 284 bits (726), Expect = 5.710e-84 Identity = 166/261 (63.60%), Postives = 202/261 (77.39%), Query Frame = 1
Query: 4 SFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMA 786
SF AAK++A+ CF +LP ++HW++ LE+ADLAKRENR EAR+LYR+V +LQP A+Q WL YS++EEECGD+ + IL++GL+FCEYSESLL +A+KH E+ G L AR LLSRL+HV I+KVWRTVLEGALLEARAGN ++RK F YL+ VPWYGPIY EAFRLEEK + AL IVE GL XXXXXXXXXXXXXXXXXX K ++A G VP L R M+ +A ISKEL+WKVHFEAAQ++ER AS A
Sbjct: 623 SFEAAKDYAIACFELLPLRVHWKILLELADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDVERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNNRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIVERGLKXXXXXXXXXXXXXXXXXXXXXDAGKDAVAHGLVPDLPRTRDMISRALGSISKELIWKVHFEAAQIEERAASTAA 883
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA) HSP 1 Score: 276 bits (707), Expect = 2.550e-81 Identity = 162/272 (59.56%), Postives = 201/272 (73.90%), Query Frame = 1
Query: 1 TSFMAAKNFALECFN-----------ILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLASMM 783
+SF+ A+ FAL +LP ++HWR++LE+ADLAKR N+F EAR++YRKV LQP+ASQGWLE+SKLEEE G+L +CA +L GL +CEY+E+LL KAIKH+E+MG L AR+LL+RLKHVGIEKVWRTVLEGALLEARAGN+ M+R+ YLM HVPWYGP+Y EA+RLE A+ AL IVE GL XXXXXXXXXXXXXXX +D+ D +L R ++MLD+A IS+EL+WKVH EAAQ QER A M+
Sbjct: 1025 SSFVEAEEFALRSLGNDEDKTVVEAAVLPKQVHWRVHLELADLAKRANKFDEARRVYRKVCTLQPYASQGWLEFSKLEEESGNLERCASLLSEGLSYCEYNENLLTKAIKHEERMGNLTRARQLLARLKHVGIEKVWRTVLEGALLEARAGNVGMARRVLKYLMHHVPWYGPLYLEAYRLERDADRPIEALAIVERGLSXXXXXXXXXXXXXXXCEGMDIADGAL--------ELPRTSQMLDRATKSISRELLWKVHLEAAQAQERAALMV 1288
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.430e-79 Identity = 161/261 (61.69%), Postives = 194/261 (74.33%), Query Frame = 1
Query: 4 SFMAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLASMMA 786
SF AAK++A+ CF +LP K+HW+L+LE+ADLAKRENR EAR+LYR+V +LQP A+Q WL YS++EEECGD+ + IL++GL+FCEYSESLL +A+KH E+ G L AR LLSRL+HV I+KVWRTVLEGALLEARAGN ++RK F YL+ VPWYGPIY EAFRLEEK + AL IVE GL XXXXXXXXXXXXXXXXX R M+ +A ISKEL+WKVHFEAAQ++ER AS A
Sbjct: 973 SFEAAKDYAMACFELLPLKVHWKLFLELADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDMERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNDRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIVERGLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRDMIFRALGSISKELIWKVHFEAAQIEERAASTAA 1233
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7S2Y4L6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4L6_9STRA) HSP 1 Score: 263 bits (673), Expect = 1.450e-79 Identity = 153/259 (59.07%), Postives = 188/259 (72.59%), Query Frame = 1
Query: 4 SFMAAKNFALECFN--ILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQERLA 774
SF A+ A E LP+ +HWR+YLE+ADLA+R NR+ E+RKLY+KV +LQPFASQGWLEYSKLEE+CG + + + IL GL +CEYSE+LL +A+KHQEKMG L AR +L+RLKHVGI+KVWRTVLEGALLEARAGN DM+R+ YLM HVPWYGP+Y EA++LE A+ IVE GL XXXXXXXXXXXXX +D+ + + L R M+++AK ISKELVWK+H EAA M ER A
Sbjct: 18 SFQKAEALAQEALKDGSLPESIHWRVYLELADLARRSNRYVESRKLYQKVCQLQPFASQGWLEYSKLEEDCGFMNRVSNILHAGLEYCEYSETLLTRAVKHQEKMGNLSSARGILARLKHVGIDKVWRTVLEGALLEARAGNHDMARRVLKYLMHHVPWYGPLYLEAYKLERDQGHPMDAMHIVERGLTTXXXXXXXXXXXXXLYEEMDVTERQF--------HLPRTMHMIERAKSTISKELVWKLHLEAAHMLERTA 268
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: F0ZHK8_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHK8_DICPU) HSP 1 Score: 254 bits (650), Expect = 5.900e-76 Identity = 131/251 (52.19%), Postives = 174/251 (69.32%), Query Frame = 1
Query: 16 AKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLDMRDAKASLARGEVPQLARATKMLDKAKDCISKELVWKVHFEAAQMQER 768
A +FA + N+LP+K+HWR+YLE+ADLA R+N ARK YRKVT QP+ SQGWLEY+K+EE+ G L KC +IL+ GL C Y+ESLLIK I+H+EKM L+GAR LLS+L+ I K WR V+EG LLEARAGN+D++RK F YLM HVPWYGPIY EA++LEE+ EE+ERA+ IVE GL L + + L Q R+T +++A+ +S+E+ WK++FEAAQ++ER
Sbjct: 213 AMDFAFQSLNVLPEKVHWRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGLKHCPYNESLLIKGIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYGPLWFSALR----LYEKTSHGFL------QATRST--VERARQAVSREVTWKIYFEAAQIEER 451
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A7R9VVS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVS4_9STRA) HSP 1 Score: 235 bits (600), Expect = 2.340e-75 Identity = 112/156 (71.79%), Postives = 134/156 (85.90%), Query Frame = 1
Query: 43 NILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLE 510
N LP ++HWR++LE+ADLAKR NRF EAR+LYRKV LQP+ASQGWLE+SKLEEE GDL KCA +L GL +CEY+E+LL KAIKH+E+MG L AR+LL+RLKHVGIE+VWRTVLEGALLEARAGN+ M+R+ YLM HVPWYGP+Y EA+RLE
Sbjct: 2 NTLPKQLHWRVHLELADLAKRANRFDEARRLYRKVCTLQPYASQGWLEFSKLEEESGDLDKCACLLNEGLSYCEYNENLLTKAIKHEERMGDLTRARQLLARLKHVGIEQVWRTVLEGALLEARAGNVAMARRVLKYLMHHVPWYGPLYLEAYRLE 157
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA) HSP 1 Score: 256 bits (655), Expect = 6.060e-75 Identity = 168/336 (50.00%), Postives = 202/336 (60.12%), Query Frame = 1
Query: 4 SFMAAKNFALECF-------------NILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQPFASQGWLEYSKLEEECGDLAKCAQILRRGLMFCEYSESLLIKAIKHQEKMGRLDGARELLSRLKHVGIEKVWRTVLEGALLEARAGNMDMSRKFFNYLMTHVPWYGPIYYEAFRLEEKAEEFERALEIVESGLXXXXXXXXXXXXXXXXXXXLD----MRDAKASLARG-------------------------------------------------------------EVPQ---LARATKMLDKAKDCISKELVWKVHFEAAQMQER 768
SF AA+ +A +C + LP+++HWR+YLE+ADLAKRENRF EAR+LYR V KLQP+A QGWLEYSK+EEECG L C +IL GL +C +SESLL KAIKH+E+MG L AR LL RL+H+ ++K WRT+LEGALLEAR GN+ ++RK F YLM +VPWYGPIYYEA R EEK EEF RA+ IVESGL XXXXXXXXXXXXXXXX ++ + D K AR EVP+ L L +A +CISKELVWKVHFEAAQ+ ER
Sbjct: 350 SFEAAQKYANQCLQPEQYVGSGEANPHSLPEELHWRIYLEMADLAKRENRFTEARRLYRTVNKLQPYAPQGWLEYSKMEEECGRLHHCQKILHEGLQWCNFSESLLTKAIKHEERMGNLVAARALLGRLRHIHVDKAWRTILEGALLEARTGNVVVARKVFKYLMRNVPWYGPIYYEAARFEEKNEEFTRAISIVESGLSEXXXXXXXXXXXXXXXXSMEWIQAINDLKTQNARKMPATTTGINGTKVGGSNKSSKVVKTNNVQILANTADVNVNNSENPDMELYYRFGIPTDVFPEVPEFIDLLNTRGALQRAMNCISKELVWKVHFEAAQVAER 685 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20401.1 >prot_S-ischiensis_contig9.20401.1 ID=prot_S-ischiensis_contig9.20401.1|Name=mRNA_S-ischiensis_contig9.20401.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=269bp MAAKNFALECFNILPDKMHWRLYLEIADLAKRENRFGEARKLYRKVTKLQback to top mRNA from alignment at S-ischiensis_contig9:208161..213143- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20401.1 ID=mRNA_S-ischiensis_contig9.20401.1|Name=mRNA_S-ischiensis_contig9.20401.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4983bp|location=Sequence derived from alignment at S-ischiensis_contig9:208161..213143- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:208161..213143- >mRNA_S-ischiensis_contig9.20401.1 ID=mRNA_S-ischiensis_contig9.20401.1|Name=mRNA_S-ischiensis_contig9.20401.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1614bp|location=Sequence derived from alignment at S-ischiensis_contig9:208161..213143- (Schizocladia ischiensis KU_0333)back to top |